Wall clock time and date at job start Sat Mar 6 2021 21:12:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42900 * 113.99869 * 2 1 4 4 H 1.08997 * 112.85487 * 18.80383 * 3 2 1 5 5 C 1.53781 * 113.61371 * 150.00130 * 3 2 1 6 6 C 1.53786 * 87.17350 * 140.02193 * 5 3 2 7 7 H 1.09000 * 113.61138 * 220.06261 * 6 5 3 8 8 N 1.46496 * 113.61518 * 89.15486 * 6 5 3 9 9 C 1.34779 * 119.99390 * 154.99856 * 8 6 5 10 10 O 1.21548 * 120.00587 * 0.02562 * 9 8 6 11 11 C 1.47855 * 119.99444 * 180.02562 * 9 8 6 12 12 C 1.39551 * 120.13870 * 179.72392 * 11 9 8 13 13 C 1.37989 * 119.84926 * 179.78902 * 12 11 9 14 14 C 1.50695 * 119.92922 * 180.23264 * 13 12 11 15 15 O 1.42905 * 109.47123 * 270.25869 * 14 13 12 16 16 C 1.35896 * 116.99913 * 180.02562 * 15 14 13 17 17 C 1.38710 * 120.05357 * 179.97438 * 16 15 14 18 18 C 1.38171 * 119.94724 * 180.02562 * 17 16 15 19 19 C 1.50699 * 119.97548 * 180.02562 * 18 17 16 20 20 O 1.42899 * 109.47071 * 300.00252 * 19 18 17 21 21 Si 1.86300 * 109.47002 * 179.97438 * 19 18 17 22 22 C 1.38243 * 120.05059 * 359.97438 * 18 17 16 23 23 C 1.38288 * 120.11414 * 0.02562 * 22 18 17 24 24 C 1.38127 * 120.05499 * 359.67831 * 23 22 18 25 25 C 1.38344 * 120.14213 * 0.49067 * 13 12 11 26 26 C 1.38379 * 120.29090 * 359.74252 * 25 13 12 27 27 C 1.37933 * 120.14756 * 0.02562 * 26 25 13 28 28 C 1.53782 * 113.68763 * 247.53653 * 3 2 1 29 29 H 1.08994 * 109.47463 * 59.99987 * 1 2 3 30 30 H 1.09000 * 109.47219 * 180.02562 * 1 2 3 31 31 H 1.09008 * 109.47050 * 300.00540 * 1 2 3 32 32 H 1.09002 * 113.61445 * 254.61193 * 5 3 2 33 33 H 1.09002 * 113.61408 * 25.42923 * 5 3 2 34 34 H 0.97001 * 120.00117 * 335.00621 * 8 6 5 35 35 H 1.07994 * 120.08021 * 0.02920 * 12 11 9 36 36 H 1.09000 * 109.47313 * 30.25355 * 14 13 12 37 37 H 1.08996 * 109.47099 * 150.26066 * 14 13 12 38 38 H 1.08000 * 120.02929 * 359.97438 * 17 16 15 39 39 H 1.09000 * 109.46887 * 60.00472 * 19 18 17 40 40 H 0.96704 * 113.99561 * 299.99748 * 20 19 18 41 41 H 1.48499 * 109.99807 * 180.02562 * 21 19 18 42 42 H 1.48495 * 110.00207 * 301.31943 * 21 19 18 43 43 H 1.08000 * 119.94446 * 180.02562 * 22 18 17 44 44 H 1.08003 * 119.97484 * 179.97438 * 23 22 18 45 45 H 1.07996 * 120.02621 * 180.31797 * 24 23 22 46 46 H 1.07992 * 119.84896 * 179.76201 * 25 13 12 47 47 H 1.07998 * 119.92455 * 180.02562 * 26 25 13 48 48 H 1.08005 * 120.07358 * 179.97438 * 27 26 25 49 49 H 1.08997 * 113.61668 * 334.55390 * 28 3 2 50 50 H 1.08998 * 113.61674 * 105.37899 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0789 0.3237 5 6 3.3755 1.3719 0.7045 6 6 3.8246 2.3192 -0.4206 7 1 4.8445 2.1403 -0.7609 8 7 3.5563 3.7319 -0.1404 9 6 4.2981 4.6889 -0.7323 10 8 5.1892 4.3800 -1.4991 11 6 4.0278 6.1147 -0.4491 12 6 4.7977 7.1079 -1.0559 13 6 4.5374 8.4367 -0.7906 14 6 5.3643 9.5109 -1.4489 15 8 6.4960 9.8102 -0.6294 16 6 7.3500 10.7656 -1.0819 17 6 8.4690 11.1066 -0.3365 18 6 9.3355 12.0786 -0.7984 19 6 10.5517 12.4492 0.0106 20 8 10.1426 12.9316 1.2919 21 14 11.5073 13.7787 -0.8782 22 6 9.0883 12.7108 -2.0027 23 6 7.9734 12.3726 -2.7478 24 6 7.1074 11.3972 -2.2932 25 6 3.5224 8.7850 0.0826 26 6 2.7585 7.8048 0.6913 27 6 3.0052 6.4729 0.4311 28 6 2.7530 1.6510 -1.3014 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3633 0.5140 0.8900 32 1 3.3381 1.8458 1.6854 33 1 3.9088 0.4213 0.7138 34 1 2.8450 3.9785 0.4713 35 1 5.5929 6.8372 -1.7346 36 1 5.7041 9.1615 -2.4239 37 1 4.7595 10.4088 -1.5752 38 1 8.6624 10.6133 0.6046 39 1 11.1846 11.5710 0.1381 40 1 9.5753 13.7139 1.2548 41 1 12.7096 14.1526 -0.0908 42 1 11.9113 13.3000 -2.2246 43 1 9.7669 13.4700 -2.3624 44 1 7.7822 12.8682 -3.6881 45 1 6.2397 11.1299 -2.8779 46 1 3.3253 9.8263 0.2898 47 1 1.9674 8.0833 1.3717 48 1 2.4085 5.7088 0.9072 49 1 3.1168 0.7771 -1.8418 50 1 2.2125 2.3492 -1.9405 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_4549630.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:12:32 Heat of formation + Delta-G solvation = -57.444972 kcal Electronic energy + Delta-G solvation = -31558.153532 eV Core-core repulsion = 27097.663535 eV Total energy + Delta-G solvation = -4460.489997 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -41.75632 -41.32582 -40.43131 -39.50741 -38.83753 -37.35161 -37.25311 -34.55449 -33.16335 -32.46006 -32.14340 -31.04532 -27.95603 -27.68588 -26.82260 -26.63569 -25.88302 -24.41515 -23.66636 -23.16625 -22.25003 -21.50391 -20.73210 -19.22829 -18.96360 -18.04386 -17.83487 -17.36756 -17.24765 -17.13962 -16.93637 -16.80060 -16.61298 -16.27660 -16.16747 -15.89107 -15.84230 -15.53493 -15.28584 -14.92578 -14.82552 -14.52370 -14.24262 -14.20547 -13.89649 -13.78245 -13.57165 -13.48796 -13.44335 -13.35194 -12.91906 -12.82503 -12.59072 -12.21734 -12.19402 -12.03153 -12.00062 -11.94593 -11.65644 -11.57574 -11.21530 -10.52475 -10.50473 -10.34839 -10.06112 -9.99754 -9.92872 -9.27168 -4.99845 -0.30823 0.12598 0.19725 0.38969 1.29212 1.61191 1.64575 1.88053 1.95251 2.22428 2.66728 2.83301 2.84929 3.37920 3.44684 3.46309 3.51054 3.56287 3.66562 3.74881 3.77805 3.83659 3.89634 3.97107 4.06678 4.08094 4.16287 4.22532 4.24254 4.34746 4.39289 4.45098 4.47459 4.51343 4.53902 4.64198 4.66857 4.70022 4.74129 4.82830 4.86408 4.88105 4.90192 4.95474 4.97056 5.14830 5.24528 5.27694 5.36058 5.37229 5.38741 5.43669 5.70521 5.75712 6.25079 6.34175 6.35843 6.74717 7.02250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.400 6.400 3 C 0.063 3.937 4 H 0.109 0.891 5 C -0.134 4.134 6 C 0.116 3.884 7 H 0.091 0.909 8 N -0.693 5.693 9 C 0.560 3.440 10 O -0.580 6.580 11 C -0.156 4.156 12 C -0.055 4.055 13 C -0.114 4.114 14 C 0.099 3.901 15 O -0.328 6.328 16 C 0.116 3.884 17 C -0.148 4.148 18 C -0.084 4.084 19 C -0.082 4.082 20 O -0.556 6.556 21 Si 0.792 3.208 22 C -0.159 4.159 23 C -0.072 4.072 24 C -0.208 4.208 25 C -0.067 4.067 26 C -0.124 4.124 27 C -0.068 4.068 28 C -0.167 4.167 29 H 0.047 0.953 30 H 0.090 0.910 31 H 0.056 0.944 32 H 0.096 0.904 33 H 0.102 0.898 34 H 0.416 0.584 35 H 0.117 0.883 36 H 0.077 0.923 37 H 0.098 0.902 38 H 0.117 0.883 39 H 0.102 0.898 40 H 0.396 0.604 41 H -0.299 1.299 42 H -0.284 1.284 43 H 0.148 0.852 44 H 0.158 0.842 45 H 0.149 0.851 46 H 0.152 0.848 47 H 0.166 0.834 48 H 0.159 0.841 49 H 0.092 0.908 50 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.875 5.309 0.999 10.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.319 6.319 3 C 0.005 3.995 4 H 0.127 0.873 5 C -0.172 4.172 6 C 0.011 3.989 7 H 0.109 0.891 8 N -0.345 5.345 9 C 0.349 3.651 10 O -0.461 6.461 11 C -0.159 4.159 12 C -0.074 4.074 13 C -0.114 4.114 14 C 0.025 3.975 15 O -0.243 6.243 16 C 0.071 3.929 17 C -0.167 4.167 18 C -0.085 4.085 19 C -0.191 4.191 20 O -0.364 6.364 21 Si 0.698 3.302 22 C -0.177 4.177 23 C -0.090 4.090 24 C -0.226 4.226 25 C -0.085 4.085 26 C -0.142 4.142 27 C -0.086 4.086 28 C -0.206 4.206 29 H 0.066 0.934 30 H 0.109 0.891 31 H 0.075 0.925 32 H 0.115 0.885 33 H 0.120 0.880 34 H 0.255 0.745 35 H 0.135 0.865 36 H 0.095 0.905 37 H 0.116 0.884 38 H 0.135 0.865 39 H 0.119 0.881 40 H 0.246 0.754 41 H -0.228 1.228 42 H -0.210 1.210 43 H 0.165 0.835 44 H 0.176 0.824 45 H 0.166 0.834 46 H 0.170 0.830 47 H 0.183 0.817 48 H 0.177 0.823 49 H 0.111 0.889 50 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -7.062 4.488 0.479 8.381 hybrid contribution -0.306 -0.828 0.048 0.884 sum -7.368 3.660 0.527 8.243 Atomic orbital electron populations 1.22965 0.79764 1.03704 1.00888 1.87929 1.21281 1.28093 1.94618 1.23908 0.94196 0.85567 0.95788 0.87342 1.23559 0.95382 0.99890 0.98337 1.21641 0.99633 0.79814 0.97842 0.89132 1.45431 1.36781 1.04879 1.47447 1.18585 0.80786 0.86319 0.79419 1.90777 1.33628 1.83855 1.37799 1.19841 1.01052 0.91741 1.03296 1.21169 0.97001 0.92106 0.97133 1.19531 0.98189 0.92731 1.00919 1.21750 0.85239 0.97453 0.93091 1.86131 1.35614 1.53887 1.48658 1.19180 0.90549 0.89457 0.93689 1.20295 0.94540 1.00754 1.01094 1.20222 0.96520 0.95882 0.95846 1.25360 0.98113 1.06611 0.89058 1.86471 1.72233 1.51044 1.26672 0.93542 0.78716 0.83139 0.74835 1.21186 0.99553 1.01960 0.94966 1.21296 0.92569 0.95143 0.99992 1.21582 1.03693 1.00897 0.96463 1.21670 0.92745 1.01746 0.92340 1.21534 1.00586 0.91782 1.00302 1.21693 0.94507 0.98251 0.94177 1.23988 0.97758 1.00909 0.97926 0.93439 0.89145 0.92550 0.88532 0.87953 0.74511 0.86465 0.90502 0.88374 0.86497 0.88075 0.75420 1.22772 1.21047 0.83459 0.82443 0.83362 0.83028 0.81654 0.82322 0.88939 0.90964 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 10.85 113.37 1.23 1.16 16 2 O -0.40 -0.97 10.72 -148.98 -1.60 -2.56 16 3 C 0.06 -0.13 4.19 31.12 0.13 0.00 16 4 H 0.11 -0.75 7.87 -2.39 -0.02 -0.77 16 5 C -0.13 0.33 7.65 31.12 0.24 0.56 16 6 C 0.12 0.13 4.33 45.58 0.20 0.33 16 7 H 0.09 0.55 7.47 -2.39 -0.02 0.54 16 8 N -0.69 0.39 5.22 -442.61 -2.31 -1.92 16 9 C 0.56 3.75 7.77 86.79 0.67 4.43 16 10 O -0.58 -9.34 15.95 -3.87 -0.06 -9.40 16 11 C -0.16 -0.48 5.87 -20.09 -0.12 -0.59 16 12 C -0.05 -0.29 9.25 22.53 0.21 -0.08 16 13 C -0.11 -0.15 5.50 -19.90 -0.11 -0.26 16 14 C 0.10 0.00 4.86 71.23 0.35 0.35 16 15 O -0.33 -2.03 10.12 -92.38 -0.93 -2.96 16 16 C 0.12 0.61 6.69 22.51 0.15 0.76 16 17 C -0.15 -0.95 9.55 22.37 0.21 -0.74 16 18 C -0.08 -0.23 5.39 -19.88 -0.11 -0.34 16 19 C -0.08 -0.15 2.82 71.24 0.20 0.05 16 20 O -0.56 -1.41 12.77 -148.98 -1.90 -3.32 16 21 Si 0.79 -1.23 29.79 68.60 2.04 0.81 16 22 C -0.16 0.12 8.67 22.28 0.19 0.31 16 23 C -0.07 0.13 10.04 22.26 0.22 0.35 16 24 C -0.21 -0.09 9.04 22.37 0.20 0.11 16 25 C -0.07 0.21 9.69 22.33 0.22 0.43 16 26 C -0.12 0.72 10.03 22.23 0.22 0.94 16 27 C -0.07 0.29 9.54 22.52 0.21 0.51 16 28 C -0.17 -0.11 7.72 31.18 0.24 0.13 16 29 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 30 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 31 H 0.06 -0.32 8.14 -2.38 -0.02 -0.34 16 32 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 33 H 0.10 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.42 -3.23 6.74 -92.71 -0.62 -3.85 16 35 H 0.12 1.01 7.65 -2.91 -0.02 0.99 16 36 H 0.08 -0.07 7.59 -2.39 -0.02 -0.09 16 37 H 0.10 -0.49 7.62 -2.39 -0.02 -0.50 16 38 H 0.12 1.01 8.06 -2.91 -0.02 0.98 16 39 H 0.10 0.40 7.96 -2.39 -0.02 0.38 16 40 H 0.40 -2.40 8.70 -74.05 -0.64 -3.05 16 41 H -0.30 -1.76 7.11 99.48 0.71 -1.05 16 42 H -0.28 -0.77 7.11 99.48 0.71 -0.07 16 43 H 0.15 -0.78 4.87 -2.91 -0.01 -0.80 16 44 H 0.16 -1.18 8.06 -2.91 -0.02 -1.20 16 45 H 0.15 -0.60 6.30 -2.91 -0.02 -0.62 16 46 H 0.15 -1.13 8.06 -2.91 -0.02 -1.16 16 47 H 0.17 -1.95 8.06 -2.91 -0.02 -1.98 16 48 H 0.16 -1.83 6.41 -2.91 -0.02 -1.85 16 49 H 0.09 0.23 8.14 -2.39 -0.02 0.21 16 50 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 Total: 0.00 -26.13 416.62 -0.24 -26.37 By element: Atomic # 1 Polarization: -15.18 SS G_CDS: -0.25 Total: -15.43 kcal Atomic # 6 Polarization: 3.64 SS G_CDS: 4.77 Total: 8.41 kcal Atomic # 7 Polarization: 0.39 SS G_CDS: -2.31 Total: -1.92 kcal Atomic # 8 Polarization: -13.75 SS G_CDS: -4.50 Total: -18.24 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: 2.04 Total: 0.81 kcal Total: -26.13 -0.24 -26.37 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_4549630.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.076 kcal (2) G-P(sol) polarization free energy of solvation -26.127 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.203 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.369 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds