Wall clock time and date at job start Sat Mar 6 2021 21:12:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42907 * 113.99543 * 2 1 4 4 H 1.09000 * 112.85162 * 18.80705 * 3 2 1 5 5 C 1.53782 * 113.61145 * 150.00074 * 3 2 1 6 6 C 1.53780 * 87.07905 * 89.11580 * 5 3 2 7 7 H 1.08997 * 113.61321 * 270.79463 * 6 5 3 8 8 N 1.46499 * 113.60973 * 139.97900 * 6 5 3 9 9 C 1.34786 * 119.99740 * 154.99837 * 8 6 5 10 10 O 1.21610 * 119.99973 * 359.97438 * 9 8 6 11 11 C 1.47376 * 119.99708 * 180.02562 * 9 8 6 12 12 C 1.36414 * 127.18734 * 180.02562 * 11 9 8 13 13 C 1.50703 * 125.80503 * 359.97438 * 12 11 9 14 14 O 1.42897 * 109.47158 * 89.71879 * 13 12 11 15 15 C 1.35900 * 117.00207 * 180.02562 * 14 13 12 16 16 C 1.38728 * 120.05417 * 180.02562 * 15 14 13 17 17 C 1.38154 * 119.93919 * 179.97438 * 16 15 14 18 18 C 1.38260 * 120.05718 * 359.97438 * 17 16 15 19 19 C 1.50696 * 119.94431 * 180.02562 * 18 17 16 20 20 O 1.42903 * 109.47278 * 300.00307 * 19 18 17 21 21 Si 1.86300 * 109.47355 * 180.02562 * 19 18 17 22 22 C 1.38268 * 120.11273 * 0.27901 * 18 17 16 23 23 C 1.38148 * 120.05255 * 359.44588 * 22 18 17 24 24 O 1.33651 * 108.39877 * 179.73348 * 12 11 9 25 25 C 1.34223 * 110.90451 * 0.26264 * 24 12 11 26 26 C 1.34170 * 109.12643 * 0.02562 * 25 24 12 27 27 C 1.53772 * 87.08317 * 25.43280 * 6 5 3 28 28 H 1.09006 * 109.47049 * 299.99737 * 1 2 3 29 29 H 1.09001 * 109.47612 * 59.99958 * 1 2 3 30 30 H 1.09000 * 109.47029 * 180.02562 * 1 2 3 31 31 H 1.08998 * 113.61457 * 334.56547 * 5 3 2 32 32 H 1.09004 * 113.68838 * 203.67976 * 5 3 2 33 33 H 0.96995 * 120.00622 * 335.00341 * 8 6 5 34 34 H 1.08998 * 109.46945 * 329.71843 * 13 12 11 35 35 H 1.09003 * 109.47249 * 209.71960 * 13 12 11 36 36 H 1.07991 * 120.03247 * 359.97438 * 16 15 14 37 37 H 1.08003 * 119.97033 * 180.02562 * 17 16 15 38 38 H 1.08997 * 109.47214 * 60.00282 * 19 18 17 39 39 H 0.96700 * 114.00022 * 180.02562 * 20 19 18 40 40 H 1.48506 * 110.00048 * 298.68478 * 21 19 18 41 41 H 1.48502 * 109.99996 * 59.99803 * 21 19 18 42 42 H 1.07999 * 119.97015 * 179.72707 * 22 18 17 43 43 H 1.08003 * 120.02568 * 180.27470 * 23 22 18 44 44 H 1.08001 * 125.43677 * 180.02562 * 25 24 12 45 45 H 1.08003 * 127.02576 * 180.02562 * 26 25 24 46 46 H 1.09001 * 113.61771 * 89.11305 * 27 6 5 47 47 H 1.08995 * 113.61730 * 220.01892 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3056 0.0000 4 1 1.3137 2.0790 0.3238 5 6 3.3755 1.3720 0.7045 6 6 4.0060 1.0332 -0.6565 7 1 4.1098 -0.0370 -0.8354 8 7 5.2362 1.7785 -0.9351 9 6 6.1521 1.2735 -1.7852 10 8 5.9576 0.1991 -2.3207 11 6 7.3899 2.0229 -2.0650 12 6 8.4080 1.6533 -2.8943 13 6 8.4698 0.3827 -3.7023 14 8 7.8734 0.6026 -4.9821 15 6 7.8467 -0.4513 -5.8398 16 6 7.2831 -0.3080 -7.0993 17 6 7.2578 -1.3808 -7.9694 18 6 7.7939 -2.5962 -7.5861 19 6 7.7655 -3.7645 -8.5374 20 8 6.4109 -4.0739 -8.8715 21 14 8.5582 -5.2437 -7.7285 22 6 8.3516 -2.7430 -6.3294 23 6 8.3845 -1.6717 -5.4577 24 8 9.3390 2.6119 -2.8725 25 6 8.9796 3.6100 -2.0502 26 6 7.7872 3.3234 -1.5059 27 6 2.7534 1.6490 -1.3017 28 1 -0.3633 0.5138 0.8901 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 3.5170 0.5959 1.4566 32 1 3.6321 2.3667 1.0693 33 1 5.3916 2.6352 -0.5077 34 1 7.9290 -0.4066 -3.1802 35 1 9.5103 0.0852 -3.8327 36 1 6.8645 0.6412 -7.3993 37 1 6.8195 -1.2697 -8.9502 38 1 8.3138 -3.5084 -9.4439 39 1 6.3164 -4.8181 -9.4817 40 1 9.9766 -4.9460 -7.4045 41 1 7.8194 -5.6029 -6.4914 42 1 8.7658 -3.6946 -6.0307 43 1 8.8241 -1.7856 -4.4778 44 1 9.5579 4.5015 -1.8574 45 1 7.2304 3.9271 -0.8046 46 1 2.8388 2.7199 -1.4862 47 1 2.3926 1.0965 -2.1692 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:12:42 Heat of formation + Delta-G solvation = -61.870535 kcal Electronic energy + Delta-G solvation = -31498.002208 eV Core-core repulsion = 27002.401872 eV Total energy + Delta-G solvation = -4495.600336 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.73028 -41.18284 -41.11153 -39.67958 -39.01512 -37.18920 -37.08306 -34.52017 -33.59418 -32.80749 -31.90964 -31.39534 -28.12938 -27.62858 -26.80601 -26.14591 -25.73509 -24.02157 -23.71470 -22.28573 -21.98197 -21.29596 -20.53354 -19.38727 -19.10356 -18.32177 -18.05965 -17.56787 -17.19994 -16.96751 -16.82928 -16.67344 -16.59543 -16.24640 -16.10778 -15.73218 -15.56470 -15.51151 -15.26987 -14.72930 -14.60351 -14.43028 -14.17983 -13.95828 -13.87890 -13.70222 -13.56398 -13.42077 -13.28701 -13.19322 -13.02901 -12.46004 -12.35849 -12.01930 -12.00412 -11.87655 -11.73892 -11.46334 -10.95715 -10.92531 -10.55363 -10.24855 -10.06073 -9.93699 -9.84038 -9.08081 -4.92250 0.05200 0.37972 0.41788 0.93359 1.35269 1.50421 1.69094 2.04045 2.15217 2.21778 2.54904 2.60726 2.73680 3.30110 3.42704 3.48846 3.54641 3.62969 3.67925 3.75814 3.81392 3.89241 3.93067 4.01549 4.03785 4.16815 4.25910 4.32232 4.34326 4.40739 4.43346 4.46538 4.53943 4.55092 4.56579 4.72926 4.74452 4.75717 4.76124 4.91817 5.01372 5.02013 5.06656 5.11108 5.25730 5.34858 5.50414 5.59127 5.77659 5.85768 6.18700 6.38073 6.49203 6.70108 7.22444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.368 6.368 3 C 0.066 3.934 4 H 0.082 0.918 5 C -0.148 4.148 6 C 0.131 3.869 7 H 0.122 0.878 8 N -0.713 5.713 9 C 0.589 3.411 10 O -0.531 6.531 11 C -0.210 4.210 12 C 0.064 3.936 13 C 0.135 3.865 14 O -0.303 6.303 15 C 0.143 3.857 16 C -0.147 4.147 17 C -0.048 4.048 18 C -0.114 4.114 19 C -0.065 4.065 20 O -0.546 6.546 21 Si 0.680 3.320 22 C -0.082 4.082 23 C -0.200 4.200 24 O -0.165 6.165 25 C -0.015 4.015 26 C -0.196 4.196 27 C -0.172 4.172 28 H 0.044 0.956 29 H 0.044 0.956 30 H 0.089 0.911 31 H 0.086 0.914 32 H 0.098 0.902 33 H 0.401 0.599 34 H 0.116 0.884 35 H 0.083 0.917 36 H 0.135 0.865 37 H 0.136 0.864 38 H 0.073 0.927 39 H 0.381 0.619 40 H -0.256 1.256 41 H -0.251 1.251 42 H 0.120 0.880 43 H 0.132 0.868 44 H 0.215 0.785 45 H 0.162 0.838 46 H 0.093 0.907 47 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.108 2.422 1.218 2.713 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.287 6.287 3 C 0.007 3.993 4 H 0.100 0.900 5 C -0.186 4.186 6 C 0.027 3.973 7 H 0.140 0.860 8 N -0.363 5.363 9 C 0.377 3.623 10 O -0.409 6.409 11 C -0.214 4.214 12 C 0.011 3.989 13 C 0.060 3.940 14 O -0.216 6.216 15 C 0.098 3.902 16 C -0.165 4.165 17 C -0.066 4.066 18 C -0.114 4.114 19 C -0.176 4.176 20 O -0.352 6.352 21 Si 0.581 3.419 22 C -0.099 4.099 23 C -0.219 4.219 24 O -0.060 6.060 25 C -0.081 4.081 26 C -0.215 4.215 27 C -0.211 4.211 28 H 0.063 0.937 29 H 0.062 0.938 30 H 0.107 0.893 31 H 0.105 0.895 32 H 0.116 0.884 33 H 0.236 0.764 34 H 0.133 0.867 35 H 0.101 0.899 36 H 0.153 0.847 37 H 0.154 0.846 38 H 0.091 0.909 39 H 0.229 0.771 40 H -0.181 1.181 41 H -0.175 1.175 42 H 0.138 0.862 43 H 0.149 0.851 44 H 0.231 0.769 45 H 0.179 0.821 46 H 0.111 0.889 47 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.559 1.850 1.782 2.629 hybrid contribution -0.207 1.411 0.582 1.541 sum 0.352 3.262 2.364 4.043 Atomic orbital electron populations 1.22858 0.80356 1.03221 1.00183 1.87907 1.20192 1.26053 1.94531 1.22849 0.94212 0.85810 0.96468 0.90011 1.23627 0.94432 1.03269 0.97267 1.22540 0.81508 0.98165 0.95117 0.86037 1.45774 1.19982 1.24028 1.46559 1.17225 0.81882 0.84574 0.78652 1.90812 1.77945 1.21620 1.50496 1.21254 0.97174 0.97891 1.05125 1.21934 0.87900 0.90871 0.98170 1.21108 0.99722 0.90787 0.82339 1.86081 1.76286 1.35002 1.24260 1.18916 0.95318 0.86100 0.89914 1.20496 1.03730 1.00610 0.91686 1.20802 0.95620 0.90805 0.99378 1.19240 1.02874 0.94793 0.94542 1.24597 0.88874 1.02880 1.01255 1.86505 1.23988 1.55624 1.69095 0.95485 0.78766 0.83833 0.83768 1.20629 0.98660 0.97726 0.92908 1.21120 1.06440 0.92944 1.01354 1.83799 1.42917 1.25669 1.53655 1.24061 0.97560 0.92540 0.93981 1.22885 0.97689 0.96244 1.04690 1.23991 0.96439 1.01885 0.98760 0.93745 0.93757 0.89253 0.89548 0.88406 0.76442 0.86679 0.89896 0.84670 0.84645 0.90876 0.77142 1.18085 1.17532 0.86249 0.85051 0.76901 0.82070 0.88868 0.90077 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.08 16 2 O -0.37 -0.81 10.63 -35.23 -0.37 -1.18 16 3 C 0.07 0.00 4.38 -25.92 -0.11 -0.11 16 4 H 0.08 -0.14 7.87 -51.93 -0.41 -0.54 16 5 C -0.15 0.13 7.66 -25.92 -0.20 -0.07 16 6 C 0.13 0.17 4.17 -67.12 -0.28 -0.11 16 7 H 0.12 0.48 7.46 -51.93 -0.39 0.09 16 8 N -0.71 -0.53 5.35 -54.11 -0.29 -0.82 16 9 C 0.59 2.26 7.81 -12.54 -0.10 2.17 16 10 O -0.53 -3.87 14.45 5.27 0.08 -3.79 16 11 C -0.21 -0.54 6.31 -103.28 -0.65 -1.19 16 12 C 0.06 0.20 7.00 -34.96 -0.24 -0.04 16 13 C 0.14 0.42 4.73 36.01 0.17 0.59 16 14 O -0.30 -1.57 10.12 -19.43 -0.20 -1.77 16 15 C 0.14 0.70 6.69 -39.22 -0.26 0.44 16 16 C -0.15 -0.61 9.99 -39.43 -0.39 -1.01 16 17 C -0.05 -0.17 9.60 -39.60 -0.38 -0.55 16 18 C -0.11 -0.44 5.42 -104.60 -0.57 -1.01 16 19 C -0.07 -0.08 2.81 36.00 0.10 0.02 16 20 O -0.55 -0.74 12.74 -35.23 -0.45 -1.19 16 21 Si 0.68 0.05 29.78 -169.99 -5.06 -5.01 16 22 C -0.08 -0.34 8.66 -39.60 -0.34 -0.69 16 23 C -0.20 -0.82 9.04 -39.43 -0.36 -1.18 16 24 O -0.17 -0.34 10.52 7.64 0.08 -0.26 16 25 C -0.01 0.01 12.03 29.30 0.35 0.37 16 26 C -0.20 0.13 10.60 -37.46 -0.40 -0.27 16 27 C -0.17 -0.09 7.71 -25.92 -0.20 -0.29 16 28 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.04 -0.04 8.14 -51.93 -0.42 -0.47 16 30 H 0.09 -0.09 8.14 -51.93 -0.42 -0.52 16 31 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.10 -0.30 8.12 -51.93 -0.42 -0.72 16 33 H 0.40 -0.88 7.90 -40.82 -0.32 -1.20 16 34 H 0.12 0.42 6.02 -51.93 -0.31 0.11 16 35 H 0.08 0.07 7.66 -51.93 -0.40 -0.33 16 36 H 0.14 0.38 8.06 -52.49 -0.42 -0.05 16 37 H 0.14 0.26 8.06 -52.48 -0.42 -0.17 16 38 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 39 H 0.38 -1.47 8.74 45.56 0.40 -1.07 16 40 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 41 H -0.25 -0.88 7.11 56.52 0.40 -0.48 16 42 H 0.12 0.40 4.87 -52.49 -0.26 0.14 16 43 H 0.13 0.27 6.30 -52.48 -0.33 -0.06 16 44 H 0.21 -1.06 8.06 -52.49 -0.42 -1.48 16 45 H 0.16 -0.62 7.74 -52.48 -0.41 -1.02 16 46 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 47 H 0.08 0.18 8.14 -51.93 -0.42 -0.24 16 LS Contribution 396.96 15.07 5.98 5.98 Total: 0.00 -10.72 396.96 -9.26 -19.99 By element: Atomic # 1 Polarization: -3.83 SS G_CDS: -6.26 Total: -10.09 kcal Atomic # 6 Polarization: 0.91 SS G_CDS: -2.77 Total: -1.85 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.29 Total: -0.82 kcal Atomic # 8 Polarization: -7.33 SS G_CDS: -0.86 Total: -8.19 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.06 Total: -5.01 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -10.72 -9.26 -19.99 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.884 kcal (2) G-P(sol) polarization free energy of solvation -10.724 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.609 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.262 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.986 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.871 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds