Wall clock time and date at job start Sat Mar 6 2021 21:12:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.42896 * 114.00386 * 2 1 4 4 H 1.09004 * 112.84222 * 341.19811 * 3 2 1 5 5 C 1.53783 * 113.69136 * 112.45800 * 3 2 1 6 6 C 1.53783 * 87.07593 * 139.99543 * 5 3 2 7 7 H 1.09003 * 113.68746 * 220.00863 * 6 5 3 8 8 N 1.46499 * 113.61254 * 89.12213 * 6 5 3 9 9 C 1.34777 * 120.00199 * 107.50239 * 8 6 5 10 10 O 1.21553 * 119.99924 * 359.97438 * 9 8 6 11 11 C 1.47850 * 119.99831 * 180.27510 * 9 8 6 12 12 C 1.39556 * 120.14147 * 179.45029 * 11 9 8 13 13 C 1.50704 * 120.07473 * 359.97438 * 12 11 9 14 14 O 1.42902 * 109.46834 * 179.97438 * 13 12 11 15 15 C 1.35900 * 116.99665 * 180.02562 * 14 13 12 16 16 C 1.38713 * 120.05674 * 179.73319 * 15 14 13 17 17 C 1.38160 * 119.94474 * 179.76699 * 16 15 14 18 18 C 1.50702 * 119.97585 * 180.22778 * 17 16 15 19 19 O 1.42900 * 109.46939 * 65.24919 * 18 17 16 20 20 Si 1.86296 * 109.47487 * 185.25367 * 18 17 16 21 21 C 1.38247 * 120.05732 * 0.47821 * 17 16 15 22 22 C 1.38291 * 120.10885 * 359.77112 * 21 17 16 23 23 C 1.38120 * 120.05765 * 0.02562 * 22 21 17 24 24 C 1.37982 * 119.84866 * 179.71670 * 12 11 9 25 25 C 1.38330 * 120.14450 * 0.57809 * 24 12 11 26 26 C 1.38384 * 120.29572 * 359.67504 * 25 24 12 27 27 C 1.37939 * 120.14119 * 0.04338 * 26 25 24 28 28 C 1.53770 * 113.61616 * 210.00044 * 3 2 1 29 29 H 1.08997 * 109.47015 * 299.99979 * 1 2 3 30 30 H 1.09002 * 109.46797 * 60.00316 * 1 2 3 31 31 H 1.08997 * 109.46812 * 179.97438 * 1 2 3 32 32 H 1.08995 * 113.61226 * 25.45080 * 5 3 2 33 33 H 1.08996 * 113.61645 * 254.54421 * 5 3 2 34 34 H 0.97001 * 120.00074 * 287.49342 * 8 6 5 35 35 H 1.08994 * 109.46827 * 300.00486 * 13 12 11 36 36 H 1.08996 * 109.46780 * 60.00262 * 13 12 11 37 37 H 1.08004 * 120.02466 * 359.97438 * 16 15 14 38 38 H 1.09006 * 109.46531 * 305.25414 * 18 17 16 39 39 H 0.96703 * 114.00132 * 180.02562 * 19 18 17 40 40 H 1.48499 * 109.99839 * 299.99822 * 20 18 17 41 41 H 1.48504 * 110.00201 * 61.31668 * 20 18 17 42 42 H 1.08002 * 119.94914 * 179.74697 * 21 17 16 43 43 H 1.07998 * 119.97149 * 179.97438 * 22 21 17 44 44 H 1.07998 * 120.03130 * 180.02562 * 23 22 21 45 45 H 1.08001 * 119.92665 * 180.29366 * 24 12 11 46 46 H 1.08009 * 119.85376 * 179.69545 * 25 24 12 47 47 H 1.07998 * 119.92777 * 180.02562 * 26 25 24 48 48 H 1.07994 * 120.06830 * 179.97438 * 27 26 25 49 49 H 1.08997 * 113.61786 * 105.38433 * 28 3 2 50 50 H 1.08995 * 113.61505 * 334.47896 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0104 1.3054 0.0000 4 1 1.3138 2.0788 -0.3238 5 6 2.7531 1.6510 1.3014 6 6 3.8221 2.3198 0.4210 7 1 4.8425 2.1436 0.7612 8 7 3.5517 3.7320 0.1406 9 6 4.2913 4.6904 0.7332 10 8 5.1823 4.3829 1.5006 11 6 4.0144 6.1158 0.4548 12 6 4.7709 7.1108 1.0756 13 6 5.8727 6.7353 2.0327 14 8 6.4948 7.9211 2.5317 15 6 7.5164 7.7577 3.4130 16 6 8.1690 8.8657 3.9331 17 6 9.2041 8.6971 4.8326 18 6 9.9103 9.9004 5.4021 19 8 8.9987 10.6510 6.2069 20 14 11.3464 9.3404 6.4483 21 6 9.5961 7.4252 5.2067 22 6 8.9504 6.3189 4.6855 23 6 7.9123 6.4822 3.7893 24 6 4.5112 8.4391 0.8069 25 6 3.4958 8.7855 -0.0663 26 6 2.7385 7.8039 -0.6812 27 6 2.9916 6.4722 -0.4257 28 6 3.3756 1.3718 -0.7045 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1169 0.7771 1.8418 33 1 2.2133 2.3503 1.9398 34 1 2.8405 3.9775 -0.4717 35 1 5.4543 6.1668 2.8632 36 1 6.6137 6.1277 1.5133 37 1 7.8660 9.8594 3.6378 38 1 10.2761 10.5260 4.5878 39 1 9.3859 11.4419 6.6063 40 1 10.8608 8.4865 7.5620 41 1 12.3175 8.5857 5.6159 42 1 10.4082 7.2953 5.9068 43 1 9.2587 5.3263 4.9790 44 1 7.4081 5.6179 3.3829 45 1 5.0989 9.2100 1.2829 46 1 3.2933 9.8269 -0.2695 47 1 1.9475 8.0811 -1.3622 48 1 2.3996 5.7072 -0.9059 49 1 3.3383 1.8456 -1.6853 50 1 3.9095 0.4216 -0.7124 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_4557126.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:12:55 Heat of formation + Delta-G solvation = -54.006519 kcal Electronic energy + Delta-G solvation = -32585.080329 eV Core-core repulsion = 28124.739435 eV Total energy + Delta-G solvation = -4460.340894 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.87557 -41.15478 -40.46382 -39.23994 -38.77563 -37.37052 -37.22323 -34.43596 -33.30492 -32.49703 -32.01939 -30.93923 -28.08113 -27.72368 -26.87920 -26.56096 -25.61143 -24.58599 -23.55877 -23.11557 -21.84584 -21.65003 -20.64328 -19.10743 -18.73281 -18.36382 -18.03903 -17.37718 -17.37081 -17.03687 -17.00124 -16.77046 -16.45018 -16.25664 -16.00355 -15.85531 -15.79588 -15.48340 -15.29116 -14.69691 -14.50756 -14.41961 -14.23783 -14.14919 -14.02628 -13.68508 -13.58489 -13.52317 -13.41181 -13.36153 -13.10533 -12.76591 -12.31566 -12.28517 -12.23538 -12.09390 -12.04615 -11.99255 -11.69838 -11.62902 -10.88264 -10.55940 -10.32079 -10.30972 -10.06124 -9.88190 -9.78078 -9.12869 -4.92986 -0.30521 0.20022 0.31708 0.50229 1.31037 1.69078 1.74390 1.89035 2.02107 2.14318 2.67836 2.74290 2.74657 3.30927 3.41976 3.44360 3.49096 3.56776 3.67328 3.73140 3.77085 3.88005 3.92150 3.96054 4.09462 4.24816 4.25853 4.27387 4.31669 4.34761 4.35530 4.37298 4.43104 4.45136 4.59677 4.62965 4.65552 4.68356 4.70093 4.72241 4.78612 4.85026 4.86710 4.90730 5.04760 5.10570 5.27599 5.32237 5.38554 5.39433 5.48319 5.54583 5.72622 5.78338 6.14891 6.28659 6.48550 6.65869 7.02417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.375 6.375 3 C 0.060 3.940 4 H 0.085 0.915 5 C -0.166 4.166 6 C 0.121 3.879 7 H 0.114 0.886 8 N -0.709 5.709 9 C 0.563 3.437 10 O -0.532 6.532 11 C -0.136 4.136 12 C -0.028 4.028 13 C 0.106 3.894 14 O -0.318 6.318 15 C 0.136 3.864 16 C -0.123 4.123 17 C -0.039 4.039 18 C -0.072 4.072 19 O -0.544 6.544 20 Si 0.686 3.314 21 C -0.162 4.162 22 C -0.072 4.072 23 C -0.201 4.201 24 C -0.107 4.107 25 C -0.087 4.087 26 C -0.125 4.125 27 C -0.083 4.083 28 C -0.142 4.142 29 H 0.042 0.958 30 H 0.042 0.958 31 H 0.087 0.913 32 H 0.102 0.898 33 H 0.074 0.926 34 H 0.400 0.600 35 H 0.090 0.910 36 H 0.090 0.910 37 H 0.135 0.865 38 H 0.076 0.924 39 H 0.382 0.618 40 H -0.250 1.250 41 H -0.255 1.255 42 H 0.119 0.881 43 H 0.130 0.870 44 H 0.137 0.863 45 H 0.142 0.858 46 H 0.133 0.867 47 H 0.133 0.867 48 H 0.128 0.872 49 H 0.079 0.921 50 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.248 2.568 -2.867 4.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.002 3.998 4 H 0.103 0.897 5 C -0.205 4.205 6 C 0.015 3.985 7 H 0.132 0.868 8 N -0.361 5.361 9 C 0.352 3.648 10 O -0.410 6.410 11 C -0.139 4.139 12 C -0.029 4.029 13 C 0.032 3.968 14 O -0.232 6.232 15 C 0.091 3.909 16 C -0.141 4.141 17 C -0.039 4.039 18 C -0.183 4.183 19 O -0.350 6.350 20 Si 0.588 3.412 21 C -0.180 4.180 22 C -0.090 4.090 23 C -0.219 4.219 24 C -0.125 4.125 25 C -0.106 4.106 26 C -0.143 4.143 27 C -0.102 4.102 28 C -0.181 4.181 29 H 0.061 0.939 30 H 0.061 0.939 31 H 0.106 0.894 32 H 0.121 0.879 33 H 0.093 0.907 34 H 0.236 0.764 35 H 0.108 0.892 36 H 0.108 0.892 37 H 0.153 0.847 38 H 0.094 0.906 39 H 0.230 0.770 40 H -0.175 1.175 41 H -0.180 1.180 42 H 0.136 0.864 43 H 0.148 0.852 44 H 0.155 0.845 45 H 0.159 0.841 46 H 0.150 0.850 47 H 0.150 0.850 48 H 0.145 0.855 49 H 0.098 0.902 50 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -1.539 1.161 -2.282 2.987 hybrid contribution -1.165 -0.085 -0.824 1.429 sum -2.703 1.076 -3.106 4.256 Atomic orbital electron populations 1.22827 0.80830 1.03140 1.00002 1.87961 1.19926 1.26946 1.94533 1.23822 0.93805 0.85588 0.96621 0.89670 1.23985 0.97689 1.01343 0.97481 1.21666 1.00665 0.79318 0.96825 0.86799 1.45587 1.37077 1.05511 1.47915 1.18271 0.81320 0.85246 0.79980 1.90763 1.31497 1.83212 1.35520 1.19559 0.99965 0.92136 1.02219 1.19624 0.94777 0.93236 0.95308 1.21695 0.93545 0.85019 0.96581 1.85938 1.45760 1.34162 1.57326 1.18904 0.88147 0.93676 0.90166 1.20198 0.96839 0.97789 0.99316 1.19084 0.95840 0.93005 0.95955 1.24720 1.00074 0.94335 0.99155 1.86508 1.39138 1.42017 1.67383 0.95454 0.78162 0.86383 0.81248 1.20796 1.01991 0.92510 1.02716 1.20872 0.94343 0.98678 0.95094 1.21437 1.01239 0.96526 1.02728 1.21090 0.97815 0.95668 0.97924 1.21484 0.94089 1.00200 0.94782 1.21187 1.00298 0.92448 1.00401 1.21201 0.95755 0.97041 0.96210 1.23626 0.95808 1.00526 0.98091 0.93913 0.93914 0.89400 0.87933 0.90747 0.76370 0.89236 0.89201 0.84749 0.90639 0.77025 1.17531 1.17964 0.86361 0.85244 0.84489 0.84065 0.84954 0.84956 0.85452 0.90212 0.87380 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.46 10.72 -35.23 -0.38 -0.84 16 3 C 0.06 -0.05 4.18 -25.92 -0.11 -0.16 16 4 H 0.09 -0.21 7.87 -51.93 -0.41 -0.62 16 5 C -0.17 0.06 7.71 -25.92 -0.20 -0.14 16 6 C 0.12 -0.06 4.32 -67.12 -0.29 -0.35 16 7 H 0.11 0.10 7.46 -51.93 -0.39 -0.29 16 8 N -0.71 0.64 5.21 -53.96 -0.28 0.36 16 9 C 0.56 0.99 7.75 -12.33 -0.10 0.90 16 10 O -0.53 -2.38 13.01 5.32 0.07 -2.31 16 11 C -0.14 -0.15 5.87 -104.97 -0.62 -0.76 16 12 C -0.03 -0.06 5.91 -104.22 -0.62 -0.68 16 13 C 0.11 0.33 3.38 36.01 0.12 0.45 16 14 O -0.32 -1.26 8.62 -19.43 -0.17 -1.43 16 15 C 0.14 0.61 6.69 -39.21 -0.26 0.35 16 16 C -0.12 -0.52 9.63 -39.43 -0.38 -0.90 16 17 C -0.04 -0.15 5.38 -104.65 -0.56 -0.72 16 18 C -0.07 -0.08 2.79 36.01 0.10 0.02 16 19 O -0.54 -0.68 12.81 -35.23 -0.45 -1.13 16 20 Si 0.69 -0.10 29.85 -169.99 -5.07 -5.17 16 21 C -0.16 -0.65 8.67 -39.56 -0.34 -0.99 16 22 C -0.07 -0.25 10.04 -39.61 -0.40 -0.65 16 23 C -0.20 -0.78 9.04 -39.43 -0.36 -1.14 16 24 C -0.11 -0.13 9.37 -39.64 -0.37 -0.50 16 25 C -0.09 0.05 10.04 -39.49 -0.40 -0.35 16 26 C -0.13 0.18 10.03 -39.64 -0.40 -0.22 16 27 C -0.08 0.10 9.54 -39.19 -0.37 -0.27 16 28 C -0.14 0.21 7.66 -25.92 -0.20 0.01 16 29 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 32 H 0.10 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.40 -1.37 6.74 -40.82 -0.27 -1.64 16 35 H 0.09 0.33 6.87 -51.93 -0.36 -0.02 16 36 H 0.09 0.32 6.85 -51.93 -0.36 -0.04 16 37 H 0.13 0.44 8.06 -52.48 -0.42 0.01 16 38 H 0.08 -0.05 7.96 -51.93 -0.41 -0.46 16 39 H 0.38 -1.55 8.74 45.56 0.40 -1.15 16 40 H -0.25 -0.76 7.05 56.52 0.40 -0.36 16 41 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 42 H 0.12 0.38 4.86 -52.49 -0.26 0.13 16 43 H 0.13 0.17 8.06 -52.49 -0.42 -0.25 16 44 H 0.14 0.43 6.30 -52.49 -0.33 0.10 16 45 H 0.14 0.15 7.00 -52.49 -0.37 -0.21 16 46 H 0.13 -0.34 8.06 -52.48 -0.42 -0.77 16 47 H 0.13 -0.48 8.06 -52.49 -0.42 -0.90 16 48 H 0.13 -0.53 6.41 -52.49 -0.34 -0.87 16 49 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 50 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 LS Contribution 409.52 15.07 6.17 6.17 Total: 0.00 -8.82 409.52 -11.70 -20.52 By element: Atomic # 1 Polarization: -4.18 SS G_CDS: -6.94 Total: -11.12 kcal Atomic # 6 Polarization: -0.39 SS G_CDS: -4.65 Total: -5.04 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.28 Total: 0.36 kcal Atomic # 8 Polarization: -4.79 SS G_CDS: -0.93 Total: -5.72 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.07 Total: -5.17 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -8.82 -11.70 -20.52 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_4557126.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.490 kcal (2) G-P(sol) polarization free energy of solvation -8.817 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.307 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.700 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.517 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.007 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds