Wall clock time and date at job start Sat Mar 6 2021 21:13:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42904 * 114.00061 * 2 1 4 4 H 1.08997 * 112.84928 * 341.19844 * 3 2 1 5 5 C 1.54051 * 113.69808 * 112.47237 * 3 2 1 6 6 C 1.53775 * 86.98846 * 139.98965 * 5 3 2 7 7 H 1.08998 * 113.61683 * 219.97909 * 6 5 3 8 8 N 1.46505 * 113.61553 * 89.15979 * 6 5 3 9 9 C 1.34773 * 120.00095 * 105.86612 * 8 6 5 10 10 O 1.21703 * 119.99823 * 359.97438 * 9 8 6 11 11 C 1.46674 * 120.00015 * 179.72493 * 9 8 6 12 12 C 1.37880 * 126.22953 * 180.29833 * 11 9 8 13 13 C 1.39839 * 107.08138 * 179.97438 * 12 11 9 14 14 C 1.35455 * 107.86464 * 359.97438 * 13 12 11 15 15 C 1.50697 * 125.56014 * 180.02562 * 14 13 12 16 16 O 1.42902 * 109.47417 * 244.97336 * 15 14 13 17 17 Si 1.86293 * 109.47489 * 4.98046 * 15 14 13 18 18 N 1.35538 * 108.87172 * 359.77169 * 14 13 12 19 19 C 1.53778 * 113.61312 * 210.00555 * 3 2 1 20 20 H 1.08996 * 109.46953 * 180.02562 * 1 2 3 21 21 H 1.09011 * 109.46619 * 300.00030 * 1 2 3 22 22 H 1.08996 * 109.47477 * 59.99579 * 1 2 3 23 23 H 1.08997 * 113.61099 * 25.48026 * 5 3 2 24 24 H 1.09002 * 113.68920 * 254.50490 * 5 3 2 25 25 H 0.97000 * 119.99792 * 285.86177 * 8 6 5 26 26 H 1.07992 * 126.45997 * 359.92773 * 12 11 9 27 27 H 1.08000 * 126.06735 * 180.02562 * 13 12 11 28 28 H 1.09001 * 109.47003 * 124.98015 * 15 14 13 29 29 H 0.96705 * 113.99463 * 59.99970 * 16 15 14 30 30 H 1.48496 * 110.00350 * 179.97438 * 17 15 14 31 31 H 1.48505 * 109.99964 * 301.31716 * 17 15 14 32 32 H 0.96997 * 125.67189 * 180.23810 * 18 14 13 33 33 H 1.09003 * 113.61934 * 105.38420 * 19 3 2 34 34 H 1.08996 * 113.61634 * 334.47739 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0789 -0.3237 5 6 2.7546 1.6518 1.3035 6 6 3.8220 2.3199 0.4209 7 1 4.8425 2.1438 0.7610 8 7 3.5516 3.7322 0.1405 9 6 4.2707 4.6913 0.7564 10 8 5.1444 4.3841 1.5460 11 6 4.0041 6.1051 0.4711 12 6 4.6618 7.1854 1.0202 13 6 4.0897 8.3371 0.4709 14 6 3.1146 7.9489 -0.3854 15 6 2.2415 8.8718 -1.1960 16 8 0.8849 8.7446 -0.7653 17 14 2.8068 10.6307 -0.9569 18 7 3.0561 6.5948 -0.3985 19 6 3.3755 1.3719 -0.7046 20 1 -0.3633 -1.0276 0.0005 21 1 -0.3633 0.5139 0.8901 22 1 -0.3634 0.5139 -0.8899 23 1 3.1190 0.7779 1.8435 24 1 2.2162 2.3515 1.9427 25 1 2.8551 3.9770 -0.4886 26 1 5.4665 7.1490 1.7394 27 1 4.3752 9.3554 0.6899 28 1 2.3140 8.6071 -2.2509 29 1 0.7457 8.9649 0.1660 30 1 1.9541 11.5508 -1.7516 31 1 2.7429 10.9936 0.4817 32 1 2.4461 6.0601 -0.9302 33 1 3.3381 1.8458 -1.6855 34 1 3.9094 0.4217 -0.7126 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_6580494.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:13:19 Heat of formation + Delta-G solvation = -34.324880 kcal Electronic energy + Delta-G solvation = -18480.018024 eV Core-core repulsion = 15381.530430 eV Total energy + Delta-G solvation = -3098.487594 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -42.58488 -41.16376 -39.53391 -37.94053 -37.33121 -34.21405 -32.15542 -31.37522 -28.04551 -27.07841 -26.85573 -25.17791 -23.40271 -21.72289 -21.20407 -20.65970 -19.97518 -18.39926 -17.88778 -16.94369 -16.78530 -16.77006 -16.27929 -16.18760 -15.88089 -15.28014 -15.21085 -14.62142 -14.47269 -14.20865 -14.03288 -13.82918 -13.58676 -13.55237 -13.40687 -12.40699 -12.30419 -12.07757 -11.94616 -11.66241 -11.27490 -10.92057 -10.56749 -10.26340 -10.12320 -9.32387 -5.01310 0.30692 1.06627 1.51154 1.55798 1.78218 1.89217 2.09243 2.32072 2.73406 3.14946 3.29951 3.41940 3.48517 3.66629 3.73645 3.76857 4.17102 4.22615 4.25246 4.34495 4.36011 4.36871 4.63519 4.66603 4.68657 4.76955 4.84387 4.90588 4.96345 5.05068 5.34767 5.54758 5.78036 6.12957 6.14092 6.18036 6.34559 7.05602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.060 3.940 4 H 0.084 0.916 5 C -0.166 4.166 6 C 0.122 3.878 7 H 0.115 0.885 8 N -0.717 5.717 9 C 0.593 3.407 10 O -0.519 6.519 11 C -0.052 4.052 12 C -0.096 4.096 13 C -0.199 4.199 14 C 0.024 3.976 15 C -0.062 4.062 16 O -0.534 6.534 17 Si 0.719 3.281 18 N -0.524 5.524 19 C -0.142 4.142 20 H 0.088 0.912 21 H 0.042 0.958 22 H 0.042 0.958 23 H 0.103 0.897 24 H 0.074 0.926 25 H 0.394 0.606 26 H 0.154 0.846 27 H 0.152 0.848 28 H 0.119 0.881 29 H 0.380 0.620 30 H -0.255 1.255 31 H -0.254 1.254 32 H 0.416 0.584 33 H 0.078 0.922 34 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.787 1.548 -3.094 3.894 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.001 3.999 4 H 0.102 0.898 5 C -0.205 4.205 6 C 0.017 3.983 7 H 0.133 0.867 8 N -0.368 5.368 9 C 0.381 3.619 10 O -0.394 6.394 11 C -0.165 4.165 12 C -0.122 4.122 13 C -0.224 4.224 14 C -0.094 4.094 15 C -0.171 4.171 16 O -0.341 6.341 17 Si 0.617 3.383 18 N -0.121 5.121 19 C -0.180 4.180 20 H 0.106 0.894 21 H 0.061 0.939 22 H 0.060 0.940 23 H 0.122 0.878 24 H 0.092 0.908 25 H 0.228 0.772 26 H 0.171 0.829 27 H 0.169 0.831 28 H 0.137 0.863 29 H 0.229 0.771 30 H -0.180 1.180 31 H -0.179 1.179 32 H 0.253 0.747 33 H 0.097 0.903 34 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -1.424 1.632 -2.928 3.642 hybrid contribution -1.829 -0.452 0.163 1.891 sum -3.253 1.181 -2.765 4.429 Atomic orbital electron populations 1.22826 0.80846 1.03156 0.99970 1.87962 1.19904 1.26906 1.94525 1.23874 0.93765 0.85550 0.96677 0.89839 1.24033 0.97668 1.01378 0.97409 1.21659 1.00745 0.79117 0.96798 0.86694 1.45593 1.38918 1.05848 1.46478 1.17042 0.81246 0.83169 0.80412 1.90886 1.31907 1.82015 1.34614 1.20433 0.99590 0.93401 1.03072 1.21351 1.00370 0.89805 1.00701 1.20751 1.00004 0.99496 1.02100 1.21100 1.01693 0.83304 1.03263 1.24910 0.82959 1.08874 1.00379 1.86599 1.24712 1.90417 1.32362 0.94197 0.89623 0.72220 0.82228 1.41949 1.29204 1.06558 1.34361 1.23621 0.95793 1.00578 0.97971 0.89362 0.93936 0.93957 0.87829 0.90776 0.77249 0.82858 0.83098 0.86282 0.77122 1.18021 1.17861 0.74698 0.90308 0.87264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.37 -0.50 10.72 -35.23 -0.38 -0.87 16 3 C 0.06 -0.04 4.20 -25.78 -0.11 -0.15 16 4 H 0.08 -0.19 7.87 -51.93 -0.41 -0.60 16 5 C -0.17 0.03 7.73 -25.78 -0.20 -0.17 16 6 C 0.12 -0.03 4.30 -67.11 -0.29 -0.32 16 7 H 0.12 0.14 7.50 -51.93 -0.39 -0.25 16 8 N -0.72 0.54 5.26 -54.32 -0.29 0.25 16 9 C 0.59 1.35 7.79 -12.86 -0.10 1.25 16 10 O -0.52 -3.19 16.50 5.19 0.09 -3.10 16 11 C -0.05 -0.05 7.06 -81.98 -0.58 -0.63 16 12 C -0.10 -0.13 10.65 -39.11 -0.42 -0.54 16 13 C -0.20 0.08 9.32 -39.98 -0.37 -0.30 16 14 C 0.02 -0.03 6.47 -81.95 -0.53 -0.56 16 15 C -0.06 0.13 3.08 36.00 0.11 0.24 16 16 O -0.53 0.40 12.88 -35.23 -0.45 -0.05 16 17 Si 0.72 -1.81 30.56 -169.99 -5.19 -7.00 16 18 N -0.52 0.70 5.99 -5.70 -0.03 0.67 16 19 C -0.14 0.20 7.65 -25.92 -0.20 0.00 16 20 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 21 H 0.04 -0.06 8.14 -51.92 -0.42 -0.48 16 22 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 23 H 0.10 0.02 8.14 -51.93 -0.42 -0.40 16 24 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 25 H 0.39 -1.36 7.83 -40.82 -0.32 -1.68 16 26 H 0.15 0.17 8.06 -52.49 -0.42 -0.25 16 27 H 0.15 -0.33 6.19 -52.49 -0.32 -0.65 16 28 H 0.12 -0.37 7.96 -51.93 -0.41 -0.79 16 29 H 0.38 -1.19 8.70 45.56 0.40 -0.79 16 30 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 31 H -0.25 0.10 7.11 56.52 0.40 0.50 16 32 H 0.42 -1.54 8.19 -40.82 -0.33 -1.88 16 33 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 34 H 0.11 -0.12 8.14 -51.93 -0.42 -0.55 16 LS Contribution 294.50 15.07 4.44 4.44 Total: 0.00 -7.69 294.50 -7.78 -15.47 By element: Atomic # 1 Polarization: -5.31 SS G_CDS: -4.37 Total: -9.69 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: -1.58 Total: -0.11 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -0.32 Total: 0.92 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: -0.75 Total: -4.03 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: -5.19 Total: -7.00 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -7.69 -7.78 -15.47 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_6580494.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.859 kcal (2) G-P(sol) polarization free energy of solvation -7.685 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.544 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.466 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.325 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds