Wall clock time and date at job start Sat Mar 6 2021 21:13:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42904 * 114.00061 * 2 1 4 4 H 1.08997 * 112.84928 * 341.19844 * 3 2 1 5 5 C 1.54051 * 113.69808 * 112.47237 * 3 2 1 6 6 C 1.53775 * 86.98846 * 139.98965 * 5 3 2 7 7 H 1.08998 * 113.61683 * 219.97909 * 6 5 3 8 8 N 1.46505 * 113.61553 * 89.15979 * 6 5 3 9 9 C 1.34773 * 120.00095 * 105.86612 * 8 6 5 10 10 O 1.21703 * 119.99823 * 359.97438 * 9 8 6 11 11 C 1.46674 * 120.00015 * 179.72493 * 9 8 6 12 12 C 1.37880 * 126.22953 * 180.29833 * 11 9 8 13 13 C 1.39839 * 107.08138 * 179.97438 * 12 11 9 14 14 C 1.35455 * 107.86464 * 359.97438 * 13 12 11 15 15 C 1.50697 * 125.56014 * 180.02562 * 14 13 12 16 16 O 1.42902 * 109.47417 * 244.97336 * 15 14 13 17 17 Si 1.86293 * 109.47489 * 4.98046 * 15 14 13 18 18 N 1.35538 * 108.87172 * 359.77169 * 14 13 12 19 19 C 1.53778 * 113.61312 * 210.00555 * 3 2 1 20 20 H 1.08996 * 109.46953 * 180.02562 * 1 2 3 21 21 H 1.09011 * 109.46619 * 300.00030 * 1 2 3 22 22 H 1.08996 * 109.47477 * 59.99579 * 1 2 3 23 23 H 1.08997 * 113.61099 * 25.48026 * 5 3 2 24 24 H 1.09002 * 113.68920 * 254.50490 * 5 3 2 25 25 H 0.97000 * 119.99792 * 285.86177 * 8 6 5 26 26 H 1.07992 * 126.45997 * 359.92773 * 12 11 9 27 27 H 1.08000 * 126.06735 * 180.02562 * 13 12 11 28 28 H 1.09001 * 109.47003 * 124.98015 * 15 14 13 29 29 H 0.96705 * 113.99463 * 59.99970 * 16 15 14 30 30 H 1.48496 * 110.00350 * 179.97438 * 17 15 14 31 31 H 1.48505 * 109.99964 * 301.31716 * 17 15 14 32 32 H 0.96997 * 125.67189 * 180.23810 * 18 14 13 33 33 H 1.09003 * 113.61934 * 105.38420 * 19 3 2 34 34 H 1.08996 * 113.61634 * 334.47739 * 19 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0789 -0.3237 5 6 2.7546 1.6518 1.3035 6 6 3.8220 2.3199 0.4209 7 1 4.8425 2.1438 0.7610 8 7 3.5516 3.7322 0.1405 9 6 4.2707 4.6913 0.7564 10 8 5.1444 4.3841 1.5460 11 6 4.0041 6.1051 0.4711 12 6 4.6618 7.1854 1.0202 13 6 4.0897 8.3371 0.4709 14 6 3.1146 7.9489 -0.3854 15 6 2.2415 8.8718 -1.1960 16 8 0.8849 8.7446 -0.7653 17 14 2.8068 10.6307 -0.9569 18 7 3.0561 6.5948 -0.3985 19 6 3.3755 1.3719 -0.7046 20 1 -0.3633 -1.0276 0.0005 21 1 -0.3633 0.5139 0.8901 22 1 -0.3634 0.5139 -0.8899 23 1 3.1190 0.7779 1.8435 24 1 2.2162 2.3515 1.9427 25 1 2.8551 3.9770 -0.4886 26 1 5.4665 7.1490 1.7394 27 1 4.3752 9.3554 0.6899 28 1 2.3140 8.6071 -2.2509 29 1 0.7457 8.9649 0.1660 30 1 1.9541 11.5508 -1.7516 31 1 2.7429 10.9936 0.4817 32 1 2.4461 6.0601 -0.9302 33 1 3.3381 1.8458 -1.6855 34 1 3.9094 0.4217 -0.7126 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_6580494.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:13:18 Heat of formation + Delta-G solvation = -36.584548 kcal Electronic energy + Delta-G solvation = -18480.116011 eV Core-core repulsion = 15381.530430 eV Total energy + Delta-G solvation = -3098.585580 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.57845 -41.17908 -39.63483 -37.84049 -37.36778 -34.29150 -32.13373 -31.34350 -27.97303 -27.04077 -26.80283 -25.14001 -23.42682 -21.67701 -21.24465 -20.65451 -19.95549 -18.35887 -17.85985 -16.96853 -16.76606 -16.72855 -16.23605 -16.15179 -15.90840 -15.32179 -15.17947 -14.58720 -14.44020 -14.18596 -14.01473 -13.79580 -13.60004 -13.51236 -13.38111 -12.34668 -12.24652 -12.03271 -11.90715 -11.62899 -11.42967 -10.84206 -10.53695 -10.34166 -10.09475 -9.32004 -4.82546 0.25428 1.22273 1.52212 1.69712 1.82923 1.93897 2.19655 2.21539 2.81268 3.34026 3.35660 3.46011 3.58105 3.70255 3.77380 3.86367 4.23770 4.29127 4.32993 4.43231 4.49504 4.50091 4.68303 4.69211 4.78187 4.83873 4.87880 4.92728 4.94900 5.09784 5.33921 5.55959 5.76727 6.20844 6.23313 6.39412 6.40727 6.96756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.398 6.398 3 C 0.061 3.939 4 H 0.103 0.897 5 C -0.168 4.168 6 C 0.120 3.880 7 H 0.096 0.904 8 N -0.700 5.700 9 C 0.592 3.408 10 O -0.568 6.568 11 C -0.064 4.064 12 C -0.115 4.115 13 C -0.205 4.205 14 C 0.034 3.966 15 C -0.063 4.063 16 O -0.549 6.549 17 Si 0.793 3.207 18 N -0.512 5.512 19 C -0.131 4.131 20 H 0.091 0.909 21 H 0.045 0.955 22 H 0.054 0.946 23 H 0.095 0.905 24 H 0.068 0.932 25 H 0.410 0.590 26 H 0.146 0.854 27 H 0.167 0.833 28 H 0.136 0.864 29 H 0.390 0.610 30 H -0.299 1.299 31 H -0.282 1.282 32 H 0.428 0.572 33 H 0.096 0.904 34 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.703 1.879 -4.334 5.442 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.317 6.317 3 C 0.003 3.997 4 H 0.121 0.879 5 C -0.207 4.207 6 C 0.014 3.986 7 H 0.114 0.886 8 N -0.351 5.351 9 C 0.381 3.619 10 O -0.446 6.446 11 C -0.178 4.178 12 C -0.142 4.142 13 C -0.229 4.229 14 C -0.085 4.085 15 C -0.171 4.171 16 O -0.357 6.357 17 Si 0.697 3.303 18 N -0.109 5.109 19 C -0.169 4.169 20 H 0.110 0.890 21 H 0.064 0.936 22 H 0.073 0.927 23 H 0.113 0.887 24 H 0.087 0.913 25 H 0.246 0.754 26 H 0.164 0.836 27 H 0.184 0.816 28 H 0.154 0.846 29 H 0.239 0.761 30 H -0.227 1.227 31 H -0.208 1.208 32 H 0.268 0.732 33 H 0.114 0.886 34 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -2.374 1.931 -4.201 5.197 hybrid contribution -1.601 -0.514 0.555 1.770 sum -3.975 1.417 -3.645 5.576 Atomic orbital electron populations 1.22957 0.79859 1.03737 1.00745 1.87929 1.21163 1.28029 1.94612 1.23973 0.94250 0.85470 0.95980 0.87877 1.24012 0.97857 1.00966 0.97822 1.21609 0.99813 0.79463 0.97693 0.88578 1.45425 1.38545 1.05260 1.45905 1.17240 0.80779 0.83989 0.79882 1.90857 1.34121 1.82763 1.36895 1.20232 1.00665 0.92704 1.04183 1.21501 1.00743 0.90829 1.01146 1.20955 1.00113 0.99783 1.02082 1.21269 1.01184 0.83391 1.02630 1.25062 0.82304 1.08663 1.01105 1.86581 1.25215 1.90512 1.33343 0.93273 0.88053 0.70089 0.78905 1.41888 1.28662 1.06642 1.33720 1.23551 0.95159 1.00017 0.98221 0.89018 0.93592 0.92703 0.88667 0.91304 0.75388 0.83627 0.81608 0.84638 0.76066 1.22654 1.20839 0.73235 0.88593 0.87632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 2 O -0.40 -0.94 10.72 -148.98 -1.60 -2.54 16 3 C 0.06 -0.13 4.20 31.21 0.13 0.01 16 4 H 0.10 -0.64 7.87 -2.39 -0.02 -0.66 16 5 C -0.17 -0.07 7.73 31.21 0.24 0.17 16 6 C 0.12 0.01 4.30 45.52 0.20 0.21 16 7 H 0.10 0.41 7.50 -2.39 -0.02 0.40 16 8 N -0.70 1.00 5.26 -443.99 -2.34 -1.34 16 9 C 0.59 3.29 7.79 86.45 0.67 3.97 16 10 O -0.57 -8.22 16.50 -4.36 -0.07 -8.29 16 11 C -0.06 -0.16 7.06 40.35 0.28 0.13 16 12 C -0.12 -0.39 10.65 22.57 0.24 -0.15 16 13 C -0.21 0.24 9.32 22.01 0.21 0.45 16 14 C 0.03 -0.11 6.47 41.34 0.27 0.15 16 15 C -0.06 0.36 3.08 71.24 0.22 0.58 16 16 O -0.55 1.58 12.88 -148.98 -1.92 -0.34 16 17 Si 0.79 -4.51 30.56 68.60 2.10 -2.41 16 18 N -0.51 1.86 5.99 -171.93 -1.03 0.83 16 19 C -0.13 0.43 7.65 31.12 0.24 0.67 16 20 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 21 H 0.05 -0.16 8.14 -2.38 -0.02 -0.17 16 22 H 0.05 -0.28 8.14 -2.39 -0.02 -0.30 16 23 H 0.09 0.19 8.14 -2.39 -0.02 0.17 16 24 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 25 H 0.41 -3.26 7.83 -92.71 -0.73 -3.99 16 26 H 0.15 0.61 8.06 -2.91 -0.02 0.58 16 27 H 0.17 -0.83 6.19 -2.91 -0.02 -0.85 16 28 H 0.14 -1.17 7.96 -2.39 -0.02 -1.19 16 29 H 0.39 -2.85 8.70 -74.05 -0.64 -3.50 16 30 H -0.30 -0.53 7.11 99.48 0.71 0.18 16 31 H -0.28 0.29 7.11 99.48 0.71 0.99 16 32 H 0.43 -3.88 8.19 -92.71 -0.76 -4.64 16 33 H 0.10 -0.63 8.14 -2.39 -0.02 -0.64 16 34 H 0.11 -0.23 8.14 -2.39 -0.02 -0.25 16 Total: 0.00 -19.01 294.50 -1.88 -20.89 By element: Atomic # 1 Polarization: -13.20 SS G_CDS: -0.95 Total: -14.15 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: 3.93 Total: 7.35 kcal Atomic # 7 Polarization: 2.86 SS G_CDS: -3.37 Total: -0.51 kcal Atomic # 8 Polarization: -7.58 SS G_CDS: -3.59 Total: -11.16 kcal Atomic # 14 Polarization: -4.51 SS G_CDS: 2.10 Total: -2.41 kcal Total: -19.01 -1.88 -20.89 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_6580494.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.696 kcal (2) G-P(sol) polarization free energy of solvation -19.009 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.704 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.889 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds