Wall clock time and date at job start Sat Mar 6 2021 21:13:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42899 * 113.99975 * 2 1 4 4 H 1.08998 * 112.90515 * 341.24611 * 3 2 1 5 5 C 1.54049 * 113.61986 * 112.50322 * 3 2 1 6 6 C 1.53783 * 86.98347 * 139.97935 * 5 3 2 7 7 H 1.08999 * 113.61304 * 219.97897 * 6 5 3 8 8 N 1.46502 * 113.61588 * 89.16587 * 6 5 3 9 9 C 1.34773 * 120.00416 * 105.85950 * 8 6 5 10 10 O 1.21589 * 119.99941 * 359.97438 * 9 8 6 11 11 C 1.47531 * 119.99936 * 179.97438 * 9 8 6 12 12 C 1.36595 * 125.76852 * 179.97438 * 11 9 8 13 13 N 1.34808 * 106.83754 * 179.73649 * 12 11 9 14 14 C 1.46501 * 126.59347 * 179.97438 * 13 12 11 15 15 C 1.53004 * 109.46805 * 125.00337 * 14 13 12 16 16 O 1.42903 * 109.47179 * 180.02562 * 15 14 13 17 17 C 1.35923 * 117.00213 * 179.97438 * 16 15 14 18 18 C 1.38813 * 120.06140 * 179.97438 * 17 16 15 19 19 Cl 1.73605 * 120.03544 * 0.02729 * 18 17 16 20 20 C 1.38250 * 119.92697 * 180.02562 * 18 17 16 21 21 C 1.38247 * 120.04112 * 0.02562 * 20 18 17 22 22 C 1.50697 * 119.94225 * 180.02562 * 21 20 18 23 23 O 1.42902 * 109.47342 * 64.99856 * 22 21 20 24 24 Si 1.86302 * 109.47111 * 184.99797 * 22 21 20 25 25 C 1.38278 * 120.11893 * 359.97438 * 21 20 18 26 26 C 1.38155 * 120.07591 * 359.72701 * 25 21 20 27 27 N 1.40209 * 106.81192 * 0.02562 * 13 12 11 28 28 N 1.28757 * 108.36977 * 359.97438 * 27 13 12 29 29 C 1.53774 * 113.61462 * 210.00092 * 3 2 1 30 30 H 1.08997 * 109.47195 * 60.00495 * 1 2 3 31 31 H 1.09003 * 109.47141 * 179.97438 * 1 2 3 32 32 H 1.08997 * 109.47420 * 300.00208 * 1 2 3 33 33 H 1.08995 * 113.61305 * 25.47302 * 5 3 2 34 34 H 1.09001 * 113.69380 * 254.49539 * 5 3 2 35 35 H 0.97005 * 119.99487 * 285.86153 * 8 6 5 36 36 H 1.07995 * 126.57922 * 359.73674 * 12 11 9 37 37 H 1.08998 * 109.47386 * 245.00386 * 14 13 12 38 38 H 1.09002 * 109.47249 * 5.00572 * 14 13 12 39 39 H 1.08998 * 109.47188 * 300.00170 * 15 14 13 40 40 H 1.08996 * 109.47210 * 60.00477 * 15 14 13 41 41 H 1.08002 * 119.98087 * 179.97438 * 20 18 17 42 42 H 1.08996 * 109.47313 * 304.99476 * 22 21 20 43 43 H 0.96695 * 113.99878 * 59.99861 * 23 22 21 44 44 H 1.48501 * 109.99932 * 180.02562 * 24 22 21 45 45 H 1.48505 * 109.99830 * 301.31676 * 24 22 21 46 46 H 1.08003 * 119.96643 * 180.02562 * 25 21 20 47 47 H 1.08007 * 120.02103 * 180.30025 * 26 25 21 48 48 H 1.09002 * 113.61959 * 105.47049 * 29 3 2 49 49 H 1.09007 * 113.61548 * 334.56455 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3142 2.0797 -0.3228 5 6 2.7548 1.6496 1.3040 6 6 3.8226 2.3182 0.4222 7 1 4.8430 2.1409 0.7620 8 7 3.5532 3.7310 0.1436 9 6 4.2730 4.6888 0.7608 10 8 5.1456 4.3803 1.5493 11 6 4.0019 6.1115 0.4798 12 6 4.6559 7.1739 1.0361 13 7 4.1097 8.2881 0.5092 14 6 4.4881 9.6715 0.8079 15 6 4.8346 10.3977 -0.4935 16 8 5.2043 11.7470 -0.2022 17 6 5.5447 12.5348 -1.2562 18 6 5.9138 13.8564 -1.0458 19 17 5.9420 14.5050 0.5643 20 6 6.2590 14.6554 -2.1199 21 6 6.2360 14.1391 -3.4022 22 6 6.6132 15.0119 -4.5713 23 8 7.9907 15.3780 -4.4677 24 14 6.3369 14.0770 -6.1589 25 6 5.8686 12.8230 -3.6138 26 6 5.5287 12.0184 -2.5434 27 7 3.1090 7.8683 -0.3787 28 7 3.0735 6.5812 -0.3710 29 6 3.3755 1.3719 -0.7045 30 1 -0.3633 0.5137 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3634 0.5138 0.8899 33 1 3.1186 0.7748 1.8429 34 1 2.2168 2.3488 1.9441 35 1 2.8568 3.9771 -0.4852 36 1 5.4568 7.1297 1.7592 37 1 3.6559 10.1784 1.2963 38 1 5.3549 9.6765 1.4687 39 1 5.6668 9.8907 -0.9819 40 1 3.9679 10.3927 -1.1543 41 1 6.5459 15.6838 -1.9573 42 1 5.9971 15.9110 -4.5673 43 1 8.5984 14.6258 -4.4654 44 1 6.7058 14.9268 -7.3195 45 1 7.1473 12.8326 -6.1632 46 1 5.8520 12.4220 -4.6165 47 1 5.2466 10.9891 -2.7092 48 1 3.3384 1.8471 -1.6848 49 1 3.9088 0.4213 -0.7137 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_7143556.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:13:28 Heat of formation + Delta-G solvation = 11.108600 kcal Electronic energy + Delta-G solvation = -34365.657229 eV Core-core repulsion = 29324.750935 eV Total energy + Delta-G solvation = -5040.906295 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.128 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -43.38055 -41.52952 -41.24109 -39.67601 -39.47427 -37.80780 -37.30865 -37.18232 -36.16763 -34.02771 -32.55652 -32.04133 -31.91576 -30.63235 -27.83731 -26.79872 -26.74307 -25.84429 -25.67616 -24.29212 -23.92329 -22.85572 -22.48115 -21.70008 -20.61119 -19.85298 -19.06859 -18.55526 -17.95292 -17.72422 -17.42982 -17.22433 -17.00798 -16.95188 -16.73379 -16.55714 -16.21758 -16.12289 -15.91575 -15.69512 -15.61914 -15.37308 -15.04133 -14.91056 -14.81806 -14.57795 -14.12956 -13.83120 -13.67055 -13.63547 -13.50854 -13.48687 -13.32930 -13.19259 -12.61278 -12.58771 -12.35348 -12.28624 -12.18304 -12.08182 -11.98877 -11.96100 -11.65341 -11.55638 -11.49583 -11.35473 -10.66114 -10.53718 -10.46289 -10.12872 -10.03713 -9.36527 -4.93081 -0.04162 0.00371 0.06405 0.50331 0.70616 1.05467 1.32262 1.57371 1.91841 1.96195 1.99916 2.11926 2.36457 2.87369 3.05973 3.20460 3.38458 3.42805 3.46988 3.54010 3.57277 3.65996 3.71723 3.75223 3.81970 3.86139 3.95316 3.97239 4.04559 4.08652 4.28098 4.37636 4.42459 4.43738 4.49885 4.54598 4.57198 4.62376 4.65344 4.76034 4.79553 4.82463 4.84598 4.91559 4.95392 4.97615 5.00286 5.20212 5.23891 5.43253 5.44519 6.00304 6.26876 6.29737 6.47273 6.77593 7.02914 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.398 6.398 3 C 0.058 3.942 4 H 0.100 0.900 5 C -0.165 4.165 6 C 0.121 3.879 7 H 0.103 0.897 8 N -0.692 5.692 9 C 0.610 3.390 10 O -0.564 6.564 11 C -0.123 4.123 12 C 0.120 3.880 13 N -0.350 5.350 14 C 0.123 3.877 15 C 0.046 3.954 16 O -0.306 6.306 17 C 0.138 3.862 18 C -0.082 4.082 19 Cl -0.062 7.062 20 C -0.052 4.052 21 C -0.140 4.140 22 C -0.079 4.079 23 O -0.548 6.548 24 Si 0.767 3.233 25 C -0.070 4.070 26 C -0.189 4.189 27 N -0.079 5.079 28 N -0.215 5.215 29 C -0.133 4.133 30 H 0.052 0.948 31 H 0.092 0.908 32 H 0.046 0.954 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.416 0.584 36 H 0.237 0.763 37 H 0.123 0.877 38 H 0.149 0.851 39 H 0.083 0.917 40 H 0.085 0.915 41 H 0.143 0.857 42 H 0.127 0.873 43 H 0.387 0.613 44 H -0.305 1.305 45 H -0.277 1.277 46 H 0.155 0.845 47 H 0.160 0.840 48 H 0.091 0.909 49 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.413 -0.013 -2.024 3.150 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.317 6.317 3 C 0.000 4.000 4 H 0.118 0.882 5 C -0.204 4.204 6 C 0.016 3.984 7 H 0.121 0.879 8 N -0.342 5.342 9 C 0.396 3.604 10 O -0.442 6.442 11 C -0.263 4.263 12 C -0.037 4.037 13 N -0.135 5.135 14 C 0.003 3.997 15 C -0.030 4.030 16 O -0.218 6.218 17 C 0.091 3.909 18 C -0.109 4.109 19 Cl -0.034 7.034 20 C -0.071 4.071 21 C -0.141 4.141 22 C -0.187 4.187 23 O -0.356 6.356 24 Si 0.673 3.327 25 C -0.088 4.088 26 C -0.207 4.207 27 N -0.060 5.060 28 N -0.089 5.089 29 C -0.171 4.171 30 H 0.071 0.929 31 H 0.110 0.890 32 H 0.065 0.935 33 H 0.116 0.884 34 H 0.088 0.912 35 H 0.253 0.747 36 H 0.254 0.746 37 H 0.141 0.859 38 H 0.166 0.834 39 H 0.101 0.899 40 H 0.103 0.897 41 H 0.161 0.839 42 H 0.145 0.855 43 H 0.236 0.764 44 H -0.233 1.233 45 H -0.204 1.204 46 H 0.172 0.828 47 H 0.177 0.823 48 H 0.110 0.890 49 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -2.667 0.473 -2.786 3.886 hybrid contribution 1.291 0.112 1.034 1.658 sum -1.376 0.586 -1.752 2.304 Atomic orbital electron populations 1.22949 0.79941 1.03682 1.00716 1.87916 1.21102 1.28055 1.94649 1.23989 0.94320 0.85352 0.96330 0.88239 1.24002 0.97753 1.01015 0.97642 1.21639 1.00013 0.79256 0.97530 0.87908 1.45424 1.38285 1.05047 1.45459 1.16859 0.80624 0.83279 0.79684 1.90826 1.33867 1.82801 1.36665 1.21396 1.03097 0.95623 1.06163 1.23902 0.98227 0.84040 0.97567 1.50340 1.25043 1.08067 1.30070 1.21923 1.05854 0.74653 0.97314 1.22989 1.02099 0.80086 0.97845 1.86002 1.81616 1.22834 1.31360 1.18685 0.95703 0.89131 0.87344 1.20363 1.10570 0.92247 0.87734 1.98386 1.97250 1.85933 1.21790 1.20881 0.96019 1.00067 0.90147 1.20202 1.03848 0.95278 0.94776 1.25201 0.84581 1.05028 1.03925 1.86595 1.16008 1.37631 1.95398 0.94099 0.90464 0.75697 0.72489 1.21201 0.95327 0.92432 0.99823 1.21410 1.06551 1.02419 0.90336 1.81989 1.07945 1.04430 1.11618 1.74614 1.16207 1.03505 1.14556 1.23558 0.95191 1.00104 0.98275 0.92918 0.88954 0.93548 0.88362 0.91196 0.74726 0.74642 0.85863 0.83363 0.89920 0.89704 0.83877 0.85515 0.76405 1.23315 1.20358 0.82755 0.82276 0.89000 0.87414 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 10.85 113.37 1.23 1.20 16 2 O -0.40 -1.31 10.72 -148.98 -1.60 -2.91 16 3 C 0.06 -0.04 4.20 31.21 0.13 0.09 16 4 H 0.10 -0.34 7.87 -2.39 -0.02 -0.36 16 5 C -0.17 -0.08 7.73 31.21 0.24 0.16 16 6 C 0.12 0.02 4.30 45.52 0.20 0.21 16 7 H 0.10 0.27 7.50 -2.39 -0.02 0.26 16 8 N -0.69 -0.23 5.26 -443.21 -2.33 -2.56 16 9 C 0.61 2.46 7.82 86.69 0.68 3.14 16 10 O -0.56 -5.41 16.48 -4.00 -0.07 -5.48 16 11 C -0.12 -0.17 6.99 40.82 0.29 0.12 16 12 C 0.12 -0.51 11.27 83.85 0.95 0.44 16 13 N -0.35 1.70 3.69 -347.10 -1.28 0.41 16 14 C 0.12 -1.27 6.91 86.38 0.60 -0.67 16 15 C 0.05 -0.37 4.95 71.98 0.36 -0.01 16 16 O -0.31 0.91 9.60 -92.69 -0.89 0.02 16 17 C 0.14 -0.15 6.68 22.52 0.15 0.00 16 18 C -0.08 -0.10 6.33 22.41 0.14 0.04 16 19 Cl -0.06 -0.18 28.50 -2.72 -0.08 -0.26 16 20 C -0.05 0.01 9.46 22.27 0.21 0.22 16 21 C -0.14 0.39 5.35 -19.85 -0.11 0.29 16 22 C -0.08 0.26 2.80 71.23 0.20 0.46 16 23 O -0.55 -0.20 12.83 -148.98 -1.91 -2.11 16 24 Si 0.77 -3.57 29.88 68.60 2.05 -1.52 16 25 C -0.07 0.35 8.66 22.26 0.19 0.54 16 26 C -0.19 0.85 9.04 22.36 0.20 1.05 16 27 N -0.08 -0.12 13.65 37.02 0.51 0.39 16 28 N -0.21 -0.64 12.04 -49.99 -0.60 -1.25 16 29 C -0.13 0.29 7.65 31.12 0.24 0.53 16 30 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 31 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 32 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 33 H 0.10 0.12 8.14 -2.39 -0.02 0.10 16 34 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 35 H 0.42 -1.01 8.39 -92.70 -0.78 -1.79 16 36 H 0.24 -2.52 8.06 -2.91 -0.02 -2.54 16 37 H 0.12 -1.37 8.14 -2.39 -0.02 -1.39 16 38 H 0.15 -2.28 8.08 -2.39 -0.02 -2.30 16 39 H 0.08 -0.77 7.65 -2.39 -0.02 -0.79 16 40 H 0.08 -0.63 7.68 -2.39 -0.02 -0.65 16 41 H 0.14 -0.07 8.06 -2.91 -0.02 -0.09 16 42 H 0.13 -0.59 7.96 -2.39 -0.02 -0.61 16 43 H 0.39 -2.04 8.70 -74.06 -0.64 -2.68 16 44 H -0.30 -1.19 7.11 99.48 0.71 -0.49 16 45 H -0.28 0.48 7.01 99.48 0.70 1.18 16 46 H 0.16 -1.38 4.83 -2.91 -0.01 -1.40 16 47 H 0.16 -1.38 6.30 -2.91 -0.02 -1.39 16 48 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 49 H 0.11 -0.20 8.14 -2.38 -0.02 -0.22 16 Total: 0.00 -22.92 433.96 -0.68 -23.60 By element: Atomic # 1 Polarization: -15.76 SS G_CDS: -0.36 Total: -16.13 kcal Atomic # 6 Polarization: 1.91 SS G_CDS: 5.89 Total: 7.80 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -3.71 Total: -3.01 kcal Atomic # 8 Polarization: -6.02 SS G_CDS: -4.46 Total: -10.48 kcal Atomic # 14 Polarization: -3.57 SS G_CDS: 2.05 Total: -1.52 kcal Atomic # 17 Polarization: -0.18 SS G_CDS: -0.08 Total: -0.26 kcal Total: -22.92 -0.68 -23.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_7143556.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.707 kcal (2) G-P(sol) polarization free energy of solvation -22.921 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.599 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.109 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds