Wall clock time and date at job start Sat Mar 6 2021 21:13:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42900 * 113.99557 * 2 1 4 4 H 1.08997 * 112.91414 * 18.74302 * 3 2 1 5 5 C 1.53783 * 113.61284 * 149.99867 * 3 2 1 6 6 C 1.53787 * 87.17399 * 139.93412 * 5 3 2 7 7 H 1.08998 * 113.61617 * 220.06064 * 6 5 3 8 8 N 1.46502 * 113.61234 * 89.15827 * 6 5 3 9 9 C 1.34777 * 119.99994 * 155.00583 * 8 6 5 10 10 O 1.21554 * 119.99925 * 359.97438 * 9 8 6 11 11 C 1.47843 * 119.99808 * 179.97438 * 9 8 6 12 12 C 1.39554 * 120.14602 * 353.74781 * 11 9 8 13 13 C 1.37978 * 119.85172 * 179.97438 * 12 11 9 14 14 C 1.50700 * 119.92848 * 180.02562 * 13 12 11 15 15 O 1.42899 * 109.47394 * 105.00269 * 14 13 12 16 16 Si 1.86296 * 109.46978 * 345.00139 * 14 13 12 17 17 C 1.38342 * 120.14529 * 359.97438 * 13 12 11 18 18 C 1.50701 * 119.85450 * 179.97438 * 17 13 12 19 19 C 1.38382 * 120.28961 * 0.02562 * 17 13 12 20 20 C 1.37928 * 120.14829 * 359.74534 * 19 17 13 21 21 C 1.50698 * 120.07741 * 180.28032 * 20 19 17 22 22 C 1.53786 * 113.61093 * 247.49274 * 3 2 1 23 23 H 1.08999 * 109.46857 * 179.97438 * 1 2 3 24 24 H 1.08999 * 109.47354 * 300.00326 * 1 2 3 25 25 H 1.09003 * 109.47091 * 60.00528 * 1 2 3 26 26 H 1.09002 * 113.61449 * 254.52277 * 5 3 2 27 27 H 1.08996 * 113.61258 * 25.34419 * 5 3 2 28 28 H 0.97005 * 119.99956 * 334.99618 * 8 6 5 29 29 H 1.07993 * 120.07340 * 0.02562 * 12 11 9 30 30 H 1.09002 * 109.47051 * 225.00799 * 14 13 12 31 31 H 0.96692 * 113.99741 * 300.00837 * 15 14 13 32 32 H 1.48501 * 110.00373 * 180.02562 * 16 14 13 33 33 H 1.48495 * 110.00322 * 301.32304 * 16 14 13 34 34 H 1.09004 * 109.46971 * 89.99872 * 18 17 13 35 35 H 1.08993 * 109.47302 * 210.00201 * 18 17 13 36 36 H 1.08997 * 109.46857 * 330.00096 * 18 17 13 37 37 H 1.08008 * 119.92233 * 179.97438 * 19 17 13 38 38 H 1.09004 * 109.46930 * 263.62473 * 21 20 19 39 39 H 1.09004 * 109.47378 * 23.61401 * 21 20 19 40 40 H 1.08994 * 109.47796 * 143.62199 * 21 20 19 41 41 H 1.08999 * 113.61361 * 334.56981 * 22 3 2 42 42 H 1.08999 * 113.61344 * 105.38562 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0798 0.3226 5 6 3.3755 1.3720 0.7046 6 6 3.8253 2.3175 -0.4218 7 1 4.8451 2.1376 -0.7618 8 7 3.5580 3.7308 -0.1434 9 6 4.3003 4.6866 -0.7366 10 8 5.1918 4.3760 -1.5023 11 6 4.0302 6.1128 -0.4561 12 6 2.9278 6.4783 0.3177 13 6 2.6817 7.8111 0.5762 14 6 1.4922 8.2077 1.4121 15 8 1.9333 8.5955 2.7148 16 14 0.3250 6.7628 1.5562 17 6 3.5252 8.7841 0.0707 18 6 3.2499 10.2380 0.3566 19 6 4.6200 8.4284 -0.6973 20 6 4.8800 7.0994 -0.9592 21 6 6.0763 6.7134 -1.7905 22 6 2.7534 1.6489 -1.3018 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8901 26 1 3.3383 1.8473 1.6848 27 1 3.9081 0.4211 0.7151 28 1 2.8467 3.9786 0.4678 29 1 2.2693 5.7196 0.7140 30 1 0.9780 9.0442 0.9386 31 1 2.4002 7.8984 3.1955 32 1 -0.8528 7.1412 2.3777 33 1 -0.1162 6.3296 0.2061 34 1 3.7594 10.5305 1.2748 35 1 3.6145 10.8464 -0.4709 36 1 2.1767 10.3884 0.4729 37 1 5.2744 9.1930 -1.0894 38 1 5.7672 6.5655 -2.8253 39 1 6.8222 7.5069 -1.7442 40 1 6.5047 5.7890 -1.4036 41 1 3.1167 0.7740 -1.8409 42 1 2.2134 2.3464 -1.9419 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_9599494.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:13:33 Heat of formation + Delta-G solvation = -57.175311 kcal Electronic energy + Delta-G solvation = -23834.364175 eV Core-core repulsion = 20361.010245 eV Total energy + Delta-G solvation = -3473.353930 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 292.151 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.82917 -40.78116 -39.53124 -37.75736 -37.25480 -34.58220 -34.40857 -32.92006 -29.36425 -28.66983 -27.80159 -26.81973 -25.74695 -25.09999 -23.75726 -22.67008 -21.10693 -20.53982 -19.17074 -18.01441 -17.50994 -17.31575 -16.75562 -16.60835 -16.32885 -16.26178 -16.12639 -15.85125 -15.64235 -14.95881 -14.66335 -14.61330 -14.23122 -14.14478 -13.93110 -13.71181 -13.52777 -13.47444 -13.28324 -13.12449 -12.82619 -12.65155 -12.56198 -12.24750 -12.14941 -12.01112 -11.90307 -11.57785 -10.65782 -10.53286 -10.51221 -10.16013 -9.93324 -9.63035 -5.24207 -0.25819 0.13122 1.13332 1.48372 1.76633 1.84191 1.97335 2.63863 2.78510 3.32018 3.36281 3.41974 3.47655 3.53116 3.63146 3.76320 3.79138 3.81971 4.08321 4.12442 4.29837 4.35801 4.40204 4.40328 4.47403 4.49354 4.67236 4.68005 4.69497 4.70855 4.73803 4.82635 4.84425 4.90449 4.93359 4.96755 5.01781 5.05058 5.27146 5.43334 5.47265 5.55595 5.77767 6.18923 6.37891 6.45297 7.15313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.375 6.375 3 C 0.059 3.941 4 H 0.086 0.914 5 C -0.142 4.142 6 C 0.122 3.878 7 H 0.114 0.886 8 N -0.713 5.713 9 C 0.564 3.436 10 O -0.523 6.523 11 C -0.146 4.146 12 C -0.071 4.071 13 C -0.138 4.138 14 C -0.063 4.063 15 O -0.536 6.536 16 Si 0.670 3.330 17 C -0.024 4.024 18 C -0.121 4.121 19 C -0.132 4.132 20 C -0.007 4.007 21 C -0.124 4.124 22 C -0.167 4.167 23 H 0.087 0.913 24 H 0.043 0.957 25 H 0.042 0.958 26 H 0.081 0.919 27 H 0.107 0.893 28 H 0.398 0.602 29 H 0.126 0.874 30 H 0.116 0.884 31 H 0.379 0.621 32 H -0.250 1.250 33 H -0.253 1.253 34 H 0.082 0.918 35 H 0.069 0.931 36 H 0.071 0.929 37 H 0.133 0.867 38 H 0.078 0.922 39 H 0.060 0.940 40 H 0.097 0.903 41 H 0.102 0.898 42 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.503 -0.043 2.646 3.043 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.000 4.000 4 H 0.104 0.896 5 C -0.180 4.180 6 C 0.016 3.984 7 H 0.132 0.868 8 N -0.365 5.365 9 C 0.353 3.647 10 O -0.400 6.400 11 C -0.149 4.149 12 C -0.089 4.089 13 C -0.139 4.139 14 C -0.174 4.174 15 O -0.341 6.341 16 Si 0.571 3.429 17 C -0.024 4.024 18 C -0.177 4.177 19 C -0.150 4.150 20 C -0.008 4.008 21 C -0.180 4.180 22 C -0.206 4.206 23 H 0.105 0.895 24 H 0.061 0.939 25 H 0.060 0.940 26 H 0.099 0.901 27 H 0.126 0.874 28 H 0.234 0.766 29 H 0.143 0.857 30 H 0.134 0.866 31 H 0.226 0.774 32 H -0.174 1.174 33 H -0.178 1.178 34 H 0.101 0.899 35 H 0.088 0.912 36 H 0.090 0.910 37 H 0.151 0.849 38 H 0.097 0.903 39 H 0.079 0.921 40 H 0.115 0.885 41 H 0.120 0.880 42 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -1.849 -0.194 1.756 2.557 hybrid contribution -0.593 0.877 -0.045 1.060 sum -2.442 0.683 1.711 3.059 Atomic orbital electron populations 1.22826 0.80906 1.03098 1.00006 1.87963 1.19855 1.26968 1.94540 1.23837 0.93857 0.85575 0.96688 0.89608 1.23625 0.95694 1.00558 0.98146 1.21681 1.00621 0.79345 0.96736 0.86758 1.45631 1.37130 1.05554 1.48201 1.18218 0.81310 0.85155 0.80061 1.90760 1.30910 1.82950 1.35345 1.19595 0.98422 0.92851 1.04039 1.20966 0.96005 0.95200 0.96756 1.20046 0.99013 0.92829 1.01974 1.24991 0.99098 1.08767 0.84585 1.86521 1.78230 1.43011 1.26349 0.95273 0.80751 0.83304 0.83527 1.20005 0.92954 0.96135 0.93313 1.20927 1.02964 0.91130 1.02707 1.21050 0.98140 0.95564 1.00247 1.20100 0.94989 0.91994 0.93724 1.21132 0.94192 1.03230 0.99487 1.24026 0.97748 1.01365 0.97493 0.89458 0.93854 0.93980 0.90085 0.87432 0.76633 0.85713 0.86642 0.77409 1.17426 1.17785 0.89922 0.91244 0.91021 0.84872 0.90343 0.92060 0.88484 0.87992 0.90809 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.36 10.71 -35.23 -0.38 -0.74 16 3 C 0.06 -0.07 4.19 -25.92 -0.11 -0.18 16 4 H 0.09 -0.25 7.87 -51.93 -0.41 -0.66 16 5 C -0.14 0.27 7.65 -25.91 -0.20 0.07 16 6 C 0.12 -0.09 4.33 -67.02 -0.29 -0.38 16 7 H 0.11 0.07 7.47 -51.93 -0.39 -0.31 16 8 N -0.71 0.75 5.21 -53.87 -0.28 0.47 16 9 C 0.56 0.96 7.70 -12.33 -0.09 0.87 16 10 O -0.52 -2.45 12.96 5.32 0.07 -2.38 16 11 C -0.15 -0.14 5.87 -104.97 -0.62 -0.75 16 12 C -0.07 0.08 8.13 -39.19 -0.32 -0.24 16 13 C -0.14 0.07 5.26 -104.68 -0.55 -0.48 16 14 C -0.06 0.08 2.04 36.01 0.07 0.15 16 15 O -0.54 0.55 12.80 -35.23 -0.45 0.10 16 16 Si 0.67 -1.42 29.91 -169.99 -5.08 -6.51 16 17 C -0.02 0.00 5.89 -104.53 -0.62 -0.62 16 18 C -0.12 0.11 9.53 36.01 0.34 0.46 16 19 C -0.13 -0.05 9.31 -39.64 -0.37 -0.42 16 20 C -0.01 -0.01 5.91 -104.23 -0.62 -0.63 16 21 C -0.12 -0.18 8.73 36.00 0.31 0.14 16 22 C -0.17 0.08 7.72 -25.82 -0.20 -0.12 16 23 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 24 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 25 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 27 H 0.11 -0.16 8.14 -51.93 -0.42 -0.59 16 28 H 0.40 -1.48 6.78 -40.82 -0.28 -1.76 16 29 H 0.13 -0.49 3.52 -52.49 -0.18 -0.67 16 30 H 0.12 -0.10 6.48 -51.93 -0.34 -0.43 16 31 H 0.38 -1.78 8.70 45.56 0.40 -1.39 16 32 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 33 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 34 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.07 -0.12 8.08 -51.93 -0.42 -0.54 16 36 H 0.07 -0.06 6.22 -51.93 -0.32 -0.39 16 37 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 38 H 0.08 0.15 8.14 -51.93 -0.42 -0.28 16 39 H 0.06 0.00 8.04 -51.93 -0.42 -0.42 16 40 H 0.10 0.28 5.87 -51.93 -0.30 -0.02 16 41 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 42 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 339.27 15.07 5.11 5.11 Total: 0.00 -7.00 339.27 -9.25 -16.25 By element: Atomic # 1 Polarization: -5.16 SS G_CDS: -6.09 Total: -11.25 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -2.15 Total: -1.06 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -0.28 Total: 0.47 kcal Atomic # 8 Polarization: -2.26 SS G_CDS: -0.76 Total: -3.02 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.08 Total: -6.51 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -7.00 -9.25 -16.25 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_9599494.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.921 kcal (2) G-P(sol) polarization free energy of solvation -7.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.924 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.251 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.254 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds