Wall clock time and date at job start Sat Mar 6 2021 21:13:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42902 * 114.00321 * 2 1 4 4 H 1.09004 * 112.84450 * 341.20002 * 3 2 1 5 5 C 1.53778 * 113.61095 * 112.50268 * 3 2 1 6 6 C 1.53784 * 87.07731 * 139.98555 * 5 3 2 7 7 H 1.09000 * 113.68807 * 220.00491 * 6 5 3 8 8 N 1.46499 * 113.61633 * 89.11577 * 6 5 3 9 9 C 1.34784 * 119.99971 * 107.50076 * 8 6 5 10 10 O 1.21274 * 119.99897 * 359.72827 * 9 8 6 11 11 C 1.50695 * 119.99635 * 179.97438 * 9 8 6 12 12 N 1.46506 * 109.46874 * 180.02562 * 11 9 8 13 13 C 1.36828 * 125.05794 * 264.69612 * 12 11 9 14 14 C 1.34241 * 109.93527 * 179.81206 * 13 12 11 15 15 C 1.50703 * 126.50121 * 180.16613 * 14 13 12 16 16 O 1.42894 * 109.47454 * 255.32228 * 15 14 13 17 17 Si 1.86299 * 109.47111 * 15.32004 * 15 14 13 18 18 C 1.46484 * 107.00018 * 0.43599 * 14 13 12 19 19 C 1.39591 * 134.03993 * 179.75579 * 18 14 13 20 20 C 1.36658 * 119.76576 * 179.97438 * 19 18 14 21 21 C 1.38788 * 120.53108 * 0.02562 * 20 19 18 22 22 C 1.37789 * 120.66159 * 359.97438 * 21 20 19 23 23 C 1.37686 * 125.06420 * 84.99756 * 12 11 9 24 24 C 1.53776 * 87.08228 * 334.56321 * 6 5 3 25 25 H 1.09004 * 109.47228 * 59.99766 * 1 2 3 26 26 H 1.09001 * 109.47113 * 179.97438 * 1 2 3 27 27 H 1.09006 * 109.46764 * 299.99665 * 1 2 3 28 28 H 1.08996 * 113.61870 * 25.43454 * 5 3 2 29 29 H 1.09003 * 113.61168 * 254.52825 * 5 3 2 30 30 H 0.96999 * 119.99984 * 287.49924 * 8 6 5 31 31 H 1.09005 * 109.47403 * 300.00056 * 11 9 8 32 32 H 1.09002 * 109.47422 * 60.00295 * 11 9 8 33 33 H 1.08006 * 125.03726 * 359.96533 * 13 12 11 34 34 H 1.08994 * 109.47220 * 135.31673 * 15 14 13 35 35 H 0.96705 * 114.00418 * 59.99564 * 16 15 14 36 36 H 1.48506 * 110.00142 * 58.68015 * 17 15 14 37 37 H 1.48497 * 110.00431 * 179.97438 * 17 15 14 38 38 H 1.08005 * 120.11054 * 359.97438 * 19 18 14 39 39 H 1.08002 * 119.73754 * 179.97438 * 20 19 18 40 40 H 1.08001 * 119.66973 * 180.02562 * 21 20 19 41 41 H 1.08002 * 120.10725 * 179.97438 * 22 21 20 42 42 H 1.09001 * 113.61142 * 139.97784 * 24 6 5 43 43 H 1.08997 * 113.61750 * 270.88948 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0789 -0.3237 5 6 2.7535 1.6487 1.3018 6 6 3.8227 2.3180 0.4222 7 1 4.8431 2.1408 0.7620 8 7 3.5533 3.7309 0.1436 9 6 4.2936 4.6879 0.7375 10 8 5.1795 4.3796 1.5062 11 6 4.0168 6.1412 0.4505 12 7 4.9500 6.9756 1.2116 13 6 4.6861 7.5389 2.4304 14 6 5.7521 8.2374 2.8521 15 6 5.8678 9.0029 4.1451 16 8 5.7571 10.4029 3.8814 17 14 4.5040 8.4791 5.3011 18 6 6.7791 8.1199 1.8142 19 6 8.0760 8.6162 1.6718 20 6 8.7977 8.3168 0.5506 21 6 8.2514 7.5233 -0.4485 22 6 6.9732 7.0230 -0.3283 23 6 6.2208 7.3145 0.8045 24 6 3.3756 1.3718 -0.7045 25 1 -0.3634 0.5139 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8901 28 1 3.1166 0.7739 1.8410 29 1 2.2141 2.3476 1.9412 30 1 2.8422 3.9775 -0.4682 31 1 4.1453 6.3320 -0.6150 32 1 2.9941 6.3807 0.7418 33 1 3.7586 7.4348 2.9739 34 1 6.8338 8.7951 4.6051 35 1 4.9204 10.6610 3.4709 36 1 4.5889 7.0189 5.5582 37 1 4.6073 9.2263 6.5802 38 1 8.5074 9.2347 2.4450 39 1 9.8009 8.7013 0.4407 40 1 8.8343 7.2950 -1.3285 41 1 6.5568 6.4067 -1.1115 42 1 3.3384 1.8471 -1.6848 43 1 3.9088 0.4212 -0.7138 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:13:36 Heat of formation + Delta-G solvation = -6.862382 kcal Electronic energy + Delta-G solvation = -26241.525709 eV Core-core repulsion = 22448.475319 eV Total energy + Delta-G solvation = -3793.050390 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.50977 -41.37469 -39.83224 -38.01034 -37.63350 -37.28373 -34.41160 -33.78111 -31.35549 -30.12780 -29.06635 -27.89446 -26.92550 -25.96942 -24.98273 -23.65001 -22.76286 -21.90750 -20.81191 -20.55605 -18.85640 -18.47704 -17.87806 -17.64209 -17.26922 -16.86012 -16.60824 -16.38448 -16.32775 -16.06933 -15.90329 -15.40363 -15.31532 -14.78148 -14.60417 -14.45968 -14.28015 -13.96918 -13.87028 -13.69787 -13.57879 -13.50749 -13.26679 -12.59598 -12.47341 -12.33341 -12.12490 -12.11669 -12.01470 -11.69292 -11.68111 -11.15693 -10.60172 -10.43364 -10.29518 -10.22833 -9.03415 -8.53926 -5.03256 0.26827 0.78107 1.32405 1.36039 1.41395 1.65482 1.77487 2.03974 2.06713 2.70550 3.10311 3.26392 3.35133 3.40549 3.46737 3.63682 3.68226 3.71679 3.74941 3.78143 3.84757 4.05987 4.21908 4.30645 4.30858 4.33460 4.36026 4.57431 4.59097 4.63070 4.65010 4.70722 4.73990 4.78735 4.79861 4.85728 4.89472 4.97868 5.24568 5.30627 5.63766 5.79787 5.85238 5.89092 6.09867 6.11597 6.28598 6.35204 6.75274 6.94770 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.061 3.939 4 H 0.086 0.914 5 C -0.166 4.166 6 C 0.121 3.879 7 H 0.111 0.889 8 N -0.713 5.713 9 C 0.493 3.507 10 O -0.510 6.510 11 C 0.092 3.908 12 N -0.467 5.467 13 C 0.068 3.932 14 C -0.197 4.197 15 C -0.028 4.028 16 O -0.542 6.542 17 Si 0.682 3.318 18 C -0.087 4.087 19 C -0.066 4.066 20 C -0.145 4.145 21 C -0.096 4.096 22 C -0.128 4.128 23 C 0.108 3.892 24 C -0.142 4.142 25 H 0.042 0.958 26 H 0.087 0.913 27 H 0.042 0.958 28 H 0.101 0.899 29 H 0.073 0.927 30 H 0.402 0.598 31 H 0.119 0.881 32 H 0.124 0.876 33 H 0.171 0.829 34 H 0.111 0.889 35 H 0.376 0.624 36 H -0.256 1.256 37 H -0.254 1.254 38 H 0.122 0.878 39 H 0.123 0.877 40 H 0.125 0.875 41 H 0.115 0.885 42 H 0.080 0.920 43 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.495 0.019 -4.702 8.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.003 3.997 4 H 0.104 0.896 5 C -0.205 4.205 6 C 0.015 3.985 7 H 0.129 0.871 8 N -0.366 5.366 9 C 0.277 3.723 10 O -0.383 6.383 11 C -0.034 4.034 12 N -0.150 5.150 13 C -0.056 4.056 14 C -0.204 4.204 15 C -0.140 4.140 16 O -0.347 6.347 17 Si 0.583 3.417 18 C -0.091 4.091 19 C -0.084 4.084 20 C -0.164 4.164 21 C -0.116 4.116 22 C -0.149 4.149 23 C 0.004 3.996 24 C -0.180 4.180 25 H 0.061 0.939 26 H 0.106 0.894 27 H 0.061 0.939 28 H 0.120 0.880 29 H 0.092 0.908 30 H 0.236 0.764 31 H 0.137 0.863 32 H 0.142 0.858 33 H 0.188 0.812 34 H 0.128 0.872 35 H 0.223 0.777 36 H -0.181 1.181 37 H -0.179 1.179 38 H 0.140 0.860 39 H 0.141 0.859 40 H 0.143 0.857 41 H 0.133 0.867 42 H 0.098 0.902 43 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -6.561 -0.912 -3.227 7.368 hybrid contribution -0.118 -0.010 -0.597 0.608 sum -6.679 -0.922 -3.824 7.751 Atomic orbital electron populations 1.22828 0.80805 1.03171 0.99983 1.87968 1.19947 1.26947 1.94523 1.23821 0.93778 0.85626 0.96525 0.89579 1.23978 0.97655 1.01353 0.97473 1.21653 1.00592 0.79394 0.96857 0.87058 1.45656 1.37244 1.05544 1.48202 1.21062 0.82194 0.88002 0.81031 1.90825 1.30639 1.82756 1.34062 1.21580 0.95117 0.87676 0.99009 1.43187 1.11891 1.42623 1.17298 1.21505 0.99669 0.97878 0.86579 1.20636 0.94219 1.07066 0.98517 1.24327 1.08606 0.83265 0.97797 1.86503 1.42938 1.21221 1.84014 0.95441 0.85611 0.80391 0.80240 1.18947 0.94733 1.01058 0.94346 1.20311 0.92139 0.98300 0.97681 1.20673 1.00357 1.00855 0.94564 1.20829 0.94244 0.97414 0.99084 1.19954 0.94873 1.03804 0.96224 1.18162 0.85095 0.99575 0.96748 1.23620 0.95811 1.00528 0.98033 0.93895 0.89402 0.93918 0.88009 0.90805 0.76366 0.86333 0.85773 0.81207 0.87160 0.77727 1.18059 1.17893 0.85964 0.85919 0.85705 0.86730 0.90183 0.87458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.85 101.05 1.10 1.05 16 2 O -0.38 -0.24 10.71 -35.23 -0.38 -0.62 16 3 C 0.06 -0.11 4.19 -25.92 -0.11 -0.21 16 4 H 0.09 -0.32 7.87 -51.93 -0.41 -0.72 16 5 C -0.17 0.18 7.71 -25.92 -0.20 -0.02 16 6 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 7 H 0.11 0.11 7.47 -51.93 -0.39 -0.28 16 8 N -0.71 2.05 5.26 -53.02 -0.28 1.77 16 9 C 0.49 -0.10 7.90 -10.98 -0.09 -0.18 16 10 O -0.51 -2.69 16.03 5.56 0.09 -2.60 16 11 C 0.09 -0.27 6.48 -5.19 -0.03 -0.31 16 12 N -0.47 -0.44 2.27 -115.70 -0.26 -0.71 16 13 C 0.07 0.04 9.89 -16.73 -0.17 -0.13 16 14 C -0.20 -0.47 5.57 -102.71 -0.57 -1.04 16 15 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 16 O -0.54 -0.84 12.88 -35.23 -0.45 -1.30 16 17 Si 0.68 -0.13 30.76 -169.99 -5.23 -5.35 16 18 C -0.09 -0.37 6.35 -105.14 -0.67 -1.04 16 19 C -0.07 -0.25 10.05 -39.65 -0.40 -0.65 16 20 C -0.15 -0.41 9.97 -39.95 -0.40 -0.80 16 21 C -0.10 -0.22 10.01 -39.54 -0.40 -0.62 16 22 C -0.13 -0.33 10.00 -39.43 -0.39 -0.72 16 23 C 0.11 0.37 6.80 -83.99 -0.57 -0.21 16 24 C -0.14 0.31 7.66 -25.92 -0.20 0.11 16 25 H 0.04 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 27 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.40 -2.47 8.70 -40.82 -0.36 -2.83 16 31 H 0.12 -0.61 8.14 -51.93 -0.42 -1.03 16 32 H 0.12 -0.82 8.12 -51.93 -0.42 -1.24 16 33 H 0.17 -0.53 6.35 -52.48 -0.33 -0.87 16 34 H 0.11 0.28 7.96 -51.93 -0.41 -0.13 16 35 H 0.38 -0.98 8.70 45.56 0.40 -0.58 16 36 H -0.26 -0.75 7.11 56.52 0.40 -0.35 16 37 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 38 H 0.12 0.37 8.06 -52.48 -0.42 -0.06 16 39 H 0.12 0.11 8.06 -52.49 -0.42 -0.32 16 40 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 41 H 0.11 0.06 8.06 -52.49 -0.42 -0.36 16 42 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 43 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 LS Contribution 365.47 15.07 5.51 5.51 Total: 0.00 -11.40 365.47 -10.47 -21.87 By element: Atomic # 1 Polarization: -7.22 SS G_CDS: -6.19 Total: -13.42 kcal Atomic # 6 Polarization: -1.88 SS G_CDS: -3.28 Total: -5.15 kcal Atomic # 7 Polarization: 1.61 SS G_CDS: -0.54 Total: 1.06 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: -0.74 Total: -4.52 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: -5.23 Total: -5.35 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -11.40 -10.47 -21.87 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.011 kcal (2) G-P(sol) polarization free energy of solvation -11.399 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.612 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.873 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds