Wall clock time and date at job start Sat Mar 6 2021 21:13:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42901 * 113.99605 * 2 1 4 4 H 1.08997 * 112.91312 * 18.74766 * 3 2 1 5 5 C 1.53781 * 113.61346 * 150.00029 * 3 2 1 6 6 C 1.53786 * 87.17350 * 139.93765 * 5 3 2 7 7 H 1.09000 * 113.61138 * 220.06261 * 6 5 3 8 8 N 1.46496 * 113.61518 * 89.15486 * 6 5 3 9 9 C 1.34779 * 119.99390 * 154.99856 * 8 6 5 10 10 O 1.21624 * 120.00530 * 0.02562 * 9 8 6 11 11 C 1.47264 * 119.99433 * 180.02562 * 9 8 6 12 12 C 1.36774 * 126.94275 * 180.02562 * 11 9 8 13 13 C 1.50696 * 125.79829 * 359.97438 * 12 11 9 14 14 N 1.34655 * 108.39751 * 179.97438 * 12 11 9 15 15 C 1.36448 * 110.30044 * 359.97438 * 14 12 11 16 16 C 1.50696 * 125.57103 * 180.02562 * 15 14 12 17 17 O 1.42900 * 109.47816 * 244.98070 * 16 15 14 18 18 Si 1.86297 * 109.47313 * 4.98732 * 16 15 14 19 19 C 1.34483 * 108.85470 * 359.76088 * 15 14 12 20 20 C 1.53782 * 113.61110 * 247.49723 * 3 2 1 21 21 H 1.08997 * 109.47251 * 299.99907 * 1 2 3 22 22 H 1.08994 * 109.47197 * 60.00307 * 1 2 3 23 23 H 1.09007 * 109.46829 * 180.02562 * 1 2 3 24 24 H 1.09002 * 113.61445 * 254.52764 * 5 3 2 25 25 H 1.09002 * 113.61408 * 25.34495 * 5 3 2 26 26 H 0.97001 * 120.00117 * 335.00621 * 8 6 5 27 27 H 1.09002 * 109.47292 * 90.00196 * 13 12 11 28 28 H 1.09004 * 109.47454 * 210.00307 * 13 12 11 29 29 H 1.08998 * 109.47243 * 330.00135 * 13 12 11 30 30 H 0.97001 * 124.84621 * 180.02562 * 14 12 11 31 31 H 1.09009 * 109.46483 * 124.98323 * 16 15 14 32 32 H 0.96704 * 113.99448 * 60.00247 * 17 16 15 33 33 H 1.48506 * 109.99767 * 58.67614 * 18 16 15 34 34 H 1.48496 * 110.00191 * 179.97438 * 18 16 15 35 35 H 1.07999 * 126.83548 * 180.24581 * 19 15 14 36 36 H 1.08997 * 113.61668 * 334.56520 * 20 3 2 37 37 H 1.08998 * 113.61674 * 105.39029 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0798 0.3227 5 6 3.3755 1.3720 0.7045 6 6 3.8252 2.3176 -0.4218 7 1 4.8451 2.1376 -0.7618 8 7 3.5579 3.7308 -0.1434 9 6 4.3003 4.6865 -0.7366 10 8 5.1919 4.3758 -1.5033 11 6 4.0319 6.1071 -0.4563 12 6 4.6921 7.1865 -0.9758 13 6 5.8402 7.1322 -1.9504 14 7 4.1417 8.3058 -0.4685 15 6 3.1230 7.9889 0.3821 16 6 2.2725 8.9770 1.1380 17 8 2.4989 8.8255 2.5407 18 14 2.7233 10.7087 0.6196 19 6 2.9981 6.6507 0.4312 20 6 2.7534 1.6489 -1.3018 21 1 -0.3633 0.5138 0.8900 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 3.3383 1.8472 1.6848 25 1 3.9082 0.4211 0.7151 26 1 2.8466 3.9786 0.4679 27 1 5.4530 7.1480 -2.9692 28 1 6.4897 7.9937 -1.7952 29 1 6.4084 6.2157 -1.7918 30 1 4.4281 9.2085 -0.6783 31 1 1.2206 8.7940 0.9178 32 1 3.4159 8.9742 2.8094 33 1 2.5223 10.8695 -0.8430 34 1 1.8911 11.6926 1.3574 35 1 2.2811 6.0882 1.0106 36 1 3.1166 0.7741 -1.8410 37 1 2.2133 2.3465 -1.9419 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_9865296.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:13:38 Heat of formation + Delta-G solvation = -39.157064 kcal Electronic energy + Delta-G solvation = -20347.870713 eV Core-core repulsion = 17093.635961 eV Total energy + Delta-G solvation = -3254.234752 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -42.52418 -41.00028 -39.33576 -37.86206 -37.14658 -33.94990 -32.83109 -31.93895 -29.01079 -27.84352 -26.71864 -25.98310 -24.89381 -23.33331 -21.65510 -20.72433 -20.37671 -18.76740 -18.08449 -17.55441 -17.01965 -16.70590 -16.48669 -16.44162 -16.09235 -15.70314 -15.41384 -14.95111 -14.66043 -14.51765 -14.17154 -14.02949 -13.89868 -13.51381 -13.42250 -13.40831 -13.25428 -12.74819 -12.63116 -12.29296 -12.15724 -11.91660 -11.47520 -10.85807 -10.53607 -10.42952 -10.03297 -9.82817 -9.18136 -5.36734 0.75209 0.98008 1.17950 1.35342 1.69871 1.94313 2.38308 2.62413 2.86632 3.25402 3.50277 3.57773 3.59288 3.80030 3.88779 3.92029 4.09413 4.16776 4.30477 4.38129 4.45891 4.46468 4.51773 4.67614 4.72172 4.76835 4.79546 4.84543 4.96163 4.98868 5.01827 5.07738 5.25090 5.63598 5.69032 5.83526 6.26949 6.28473 6.38784 6.67837 7.45891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.060 3.940 4 H 0.085 0.915 5 C -0.143 4.143 6 C 0.124 3.876 7 H 0.112 0.888 8 N -0.712 5.712 9 C 0.597 3.403 10 O -0.545 6.545 11 C -0.242 4.242 12 C 0.126 3.874 13 C -0.100 4.100 14 N -0.545 5.545 15 C -0.029 4.029 16 C -0.033 4.033 17 O -0.534 6.534 18 Si 0.672 3.328 19 C -0.129 4.129 20 C -0.167 4.167 21 H 0.042 0.958 22 H 0.042 0.958 23 H 0.086 0.914 24 H 0.078 0.922 25 H 0.106 0.894 26 H 0.400 0.600 27 H 0.081 0.919 28 H 0.068 0.932 29 H 0.104 0.896 30 H 0.414 0.586 31 H 0.126 0.874 32 H 0.381 0.619 33 H -0.251 1.251 34 H -0.244 1.244 35 H 0.146 0.854 36 H 0.100 0.900 37 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.057 3.554 1.610 3.902 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.103 0.897 5 C -0.181 4.181 6 C 0.018 3.982 7 H 0.130 0.870 8 N -0.363 5.363 9 C 0.387 3.613 10 O -0.424 6.424 11 C -0.252 4.252 12 C 0.007 3.993 13 C -0.157 4.157 14 N -0.144 5.144 15 C -0.137 4.137 16 C -0.145 4.145 17 O -0.339 6.339 18 Si 0.572 3.428 19 C -0.153 4.153 20 C -0.206 4.206 21 H 0.060 0.940 22 H 0.060 0.940 23 H 0.105 0.895 24 H 0.097 0.903 25 H 0.124 0.876 26 H 0.234 0.766 27 H 0.099 0.901 28 H 0.087 0.913 29 H 0.123 0.877 30 H 0.253 0.747 31 H 0.143 0.857 32 H 0.228 0.772 33 H -0.176 1.176 34 H -0.167 1.167 35 H 0.163 0.837 36 H 0.118 0.882 37 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -0.227 3.940 0.706 4.009 hybrid contribution -1.052 0.272 0.181 1.101 sum -1.279 4.212 0.886 4.490 Atomic orbital electron populations 1.22811 0.80988 1.03000 0.99968 1.87956 1.19800 1.27136 1.94561 1.23825 0.93827 0.85405 0.96777 0.89673 1.23622 0.95713 1.00543 0.98236 1.21615 1.00371 0.79782 0.96388 0.86990 1.45454 1.37343 1.05094 1.48383 1.17303 0.80643 0.84179 0.79225 1.90756 1.32087 1.83108 1.36417 1.20078 1.04307 0.91971 1.08829 1.20412 0.96732 0.84827 0.97315 1.20665 0.93753 1.04826 0.96490 1.41711 1.27767 1.08387 1.36559 1.20524 0.96026 0.96066 1.01071 1.24423 1.00473 1.05967 0.83660 1.86550 1.33520 1.93945 1.19872 0.95449 0.90791 0.75896 0.80652 1.21785 1.00060 0.92356 1.01105 1.24016 0.97866 1.01277 0.97426 0.93959 0.93981 0.89512 0.90286 0.87606 0.76568 0.90063 0.91339 0.87696 0.74723 0.85715 0.77172 1.17588 1.16718 0.83654 0.88175 0.90862 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 2 O -0.38 -0.80 10.71 -35.23 -0.38 -1.18 16 3 C 0.06 0.02 4.19 -25.92 -0.11 -0.09 16 4 H 0.09 -0.10 7.87 -51.93 -0.41 -0.50 16 5 C -0.14 0.04 7.65 -25.92 -0.20 -0.15 16 6 C 0.12 0.10 4.33 -67.02 -0.29 -0.19 16 7 H 0.11 0.25 7.47 -51.93 -0.39 -0.14 16 8 N -0.71 -0.52 5.26 -54.05 -0.28 -0.81 16 9 C 0.60 1.93 7.81 -12.59 -0.10 1.83 16 10 O -0.55 -3.34 14.41 5.26 0.08 -3.27 16 11 C -0.24 -0.45 6.29 -103.35 -0.65 -1.10 16 12 C 0.13 0.08 7.17 -81.89 -0.59 -0.51 16 13 C -0.10 0.04 9.88 36.00 0.36 0.40 16 14 N -0.54 0.80 5.41 -5.43 -0.03 0.78 16 15 C -0.03 0.02 6.09 -81.87 -0.50 -0.48 16 16 C -0.03 0.06 2.98 36.00 0.11 0.17 16 17 O -0.53 0.66 12.88 -35.23 -0.45 0.20 16 18 Si 0.67 -1.95 30.96 -169.99 -5.26 -7.21 16 19 C -0.13 -0.04 10.45 -37.50 -0.39 -0.43 16 20 C -0.17 -0.13 7.72 -25.82 -0.20 -0.33 16 21 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 22 H 0.04 -0.03 8.14 -51.93 -0.42 -0.46 16 23 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 24 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 25 H 0.11 -0.01 8.14 -51.93 -0.42 -0.44 16 26 H 0.40 -0.54 7.83 -40.82 -0.32 -0.86 16 27 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 29 H 0.10 0.17 6.47 -51.93 -0.34 -0.17 16 30 H 0.41 -1.71 6.72 -40.82 -0.27 -1.98 16 31 H 0.13 -0.20 7.96 -51.92 -0.41 -0.61 16 32 H 0.38 -1.84 8.70 45.56 0.40 -1.44 16 33 H -0.25 0.15 7.11 56.52 0.40 0.55 16 34 H -0.24 -0.13 7.11 56.52 0.40 0.27 16 35 H 0.15 -0.17 7.70 -52.49 -0.40 -0.57 16 36 H 0.10 0.11 8.14 -51.93 -0.42 -0.31 16 37 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 LS Contribution 313.25 15.07 4.72 4.72 Total: 0.00 -7.92 313.25 -8.22 -16.15 By element: Atomic # 1 Polarization: -4.43 SS G_CDS: -5.15 Total: -9.58 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -1.46 Total: 0.20 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.31 Total: -0.03 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.76 Total: -4.25 kcal Atomic # 14 Polarization: -1.95 SS G_CDS: -5.26 Total: -7.21 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -7.92 -8.22 -16.15 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_9865296.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.011 kcal (2) G-P(sol) polarization free energy of solvation -7.922 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.933 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.146 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.157 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds