Wall clock time and date at job start Sat Mar 6 2021 21:13:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42901 * 113.99605 * 2 1 4 4 H 1.08997 * 112.91312 * 18.74766 * 3 2 1 5 5 C 1.53781 * 113.61346 * 150.00029 * 3 2 1 6 6 C 1.53786 * 87.17350 * 139.93765 * 5 3 2 7 7 H 1.09000 * 113.61138 * 220.06261 * 6 5 3 8 8 N 1.46496 * 113.61518 * 89.15486 * 6 5 3 9 9 C 1.34779 * 119.99390 * 154.99856 * 8 6 5 10 10 O 1.21624 * 120.00530 * 0.02562 * 9 8 6 11 11 C 1.47264 * 119.99433 * 180.02562 * 9 8 6 12 12 C 1.36774 * 126.94275 * 180.02562 * 11 9 8 13 13 C 1.50696 * 125.79829 * 359.97438 * 12 11 9 14 14 N 1.34655 * 108.39751 * 179.97438 * 12 11 9 15 15 C 1.36448 * 110.30044 * 359.97438 * 14 12 11 16 16 C 1.50696 * 125.57103 * 180.02562 * 15 14 12 17 17 O 1.42900 * 109.47816 * 244.98070 * 16 15 14 18 18 Si 1.86297 * 109.47313 * 4.98732 * 16 15 14 19 19 C 1.34483 * 108.85470 * 359.76088 * 15 14 12 20 20 C 1.53782 * 113.61110 * 247.49723 * 3 2 1 21 21 H 1.08997 * 109.47251 * 299.99907 * 1 2 3 22 22 H 1.08994 * 109.47197 * 60.00307 * 1 2 3 23 23 H 1.09007 * 109.46829 * 180.02562 * 1 2 3 24 24 H 1.09002 * 113.61445 * 254.52764 * 5 3 2 25 25 H 1.09002 * 113.61408 * 25.34495 * 5 3 2 26 26 H 0.97001 * 120.00117 * 335.00621 * 8 6 5 27 27 H 1.09002 * 109.47292 * 90.00196 * 13 12 11 28 28 H 1.09004 * 109.47454 * 210.00307 * 13 12 11 29 29 H 1.08998 * 109.47243 * 330.00135 * 13 12 11 30 30 H 0.97001 * 124.84621 * 180.02562 * 14 12 11 31 31 H 1.09009 * 109.46483 * 124.98323 * 16 15 14 32 32 H 0.96704 * 113.99448 * 60.00247 * 17 16 15 33 33 H 1.48506 * 109.99767 * 58.67614 * 18 16 15 34 34 H 1.48496 * 110.00191 * 179.97438 * 18 16 15 35 35 H 1.07999 * 126.83548 * 180.24581 * 19 15 14 36 36 H 1.08997 * 113.61668 * 334.56520 * 20 3 2 37 37 H 1.08998 * 113.61674 * 105.39029 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0798 0.3227 5 6 3.3755 1.3720 0.7045 6 6 3.8252 2.3176 -0.4218 7 1 4.8451 2.1376 -0.7618 8 7 3.5579 3.7308 -0.1434 9 6 4.3003 4.6865 -0.7366 10 8 5.1919 4.3758 -1.5033 11 6 4.0319 6.1071 -0.4563 12 6 4.6921 7.1865 -0.9758 13 6 5.8402 7.1322 -1.9504 14 7 4.1417 8.3058 -0.4685 15 6 3.1230 7.9889 0.3821 16 6 2.2725 8.9770 1.1380 17 8 2.4989 8.8255 2.5407 18 14 2.7233 10.7087 0.6196 19 6 2.9981 6.6507 0.4312 20 6 2.7534 1.6489 -1.3018 21 1 -0.3633 0.5138 0.8900 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 3.3383 1.8472 1.6848 25 1 3.9082 0.4211 0.7151 26 1 2.8466 3.9786 0.4679 27 1 5.4530 7.1480 -2.9692 28 1 6.4897 7.9937 -1.7952 29 1 6.4084 6.2157 -1.7918 30 1 4.4281 9.2085 -0.6783 31 1 1.2206 8.7940 0.9178 32 1 3.4159 8.9742 2.8094 33 1 2.5223 10.8695 -0.8430 34 1 1.8911 11.6926 1.3574 35 1 2.2811 6.0882 1.0106 36 1 3.1166 0.7741 -1.8410 37 1 2.2133 2.3465 -1.9419 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_9865296.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:13:38 Heat of formation + Delta-G solvation = -40.590101 kcal Electronic energy + Delta-G solvation = -20347.932854 eV Core-core repulsion = 17093.635961 eV Total energy + Delta-G solvation = -3254.296893 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.50948 -41.09040 -39.48846 -37.74078 -37.24496 -34.08449 -32.80468 -31.93757 -28.93738 -27.83121 -26.76850 -26.00848 -24.90015 -23.38226 -21.60951 -20.83979 -20.43039 -18.69862 -18.12725 -17.53610 -17.04088 -16.72857 -16.53012 -16.45681 -16.11788 -15.75421 -15.39332 -14.98397 -14.72099 -14.47980 -14.13219 -14.05137 -13.88759 -13.57223 -13.45818 -13.36483 -13.29515 -12.68781 -12.55471 -12.24836 -12.17166 -11.95445 -11.52604 -11.01391 -10.48663 -10.47518 -10.16929 -9.84052 -9.17842 -5.15483 0.67071 1.14278 1.23288 1.51052 1.83831 2.00003 2.34184 2.47775 2.86459 3.43388 3.45653 3.54675 3.70407 3.83082 3.86932 3.93919 4.06195 4.22406 4.40122 4.44305 4.48288 4.50835 4.53246 4.71626 4.74307 4.74538 4.80342 4.83682 4.93938 4.94446 4.99317 5.04938 5.25903 5.55937 5.67081 5.84392 6.26410 6.41605 6.60331 6.71572 7.30402 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.399 6.399 3 C 0.062 3.938 4 H 0.102 0.898 5 C -0.134 4.134 6 C 0.122 3.878 7 H 0.094 0.906 8 N -0.700 5.700 9 C 0.590 3.410 10 O -0.584 6.584 11 C -0.267 4.267 12 C 0.121 3.879 13 C -0.098 4.098 14 N -0.533 5.533 15 C -0.023 4.023 16 C -0.038 4.038 17 O -0.549 6.549 18 Si 0.765 3.235 19 C -0.139 4.139 20 C -0.167 4.167 21 H 0.053 0.947 22 H 0.045 0.955 23 H 0.092 0.908 24 H 0.092 0.908 25 H 0.103 0.897 26 H 0.411 0.589 27 H 0.081 0.919 28 H 0.095 0.905 29 H 0.082 0.918 30 H 0.427 0.573 31 H 0.123 0.877 32 H 0.396 0.604 33 H -0.279 1.279 34 H -0.291 1.291 35 H 0.157 0.843 36 H 0.093 0.907 37 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.460 4.453 2.362 5.062 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.318 6.318 3 C 0.004 3.996 4 H 0.120 0.880 5 C -0.172 4.172 6 C 0.016 3.984 7 H 0.112 0.888 8 N -0.351 5.351 9 C 0.381 3.619 10 O -0.465 6.465 11 C -0.277 4.277 12 C 0.001 3.999 13 C -0.155 4.155 14 N -0.134 5.134 15 C -0.132 4.132 16 C -0.149 4.149 17 O -0.356 6.356 18 Si 0.670 3.330 19 C -0.163 4.163 20 C -0.206 4.206 21 H 0.072 0.928 22 H 0.064 0.936 23 H 0.110 0.890 24 H 0.110 0.890 25 H 0.122 0.878 26 H 0.248 0.752 27 H 0.100 0.900 28 H 0.113 0.887 29 H 0.101 0.899 30 H 0.269 0.731 31 H 0.141 0.859 32 H 0.246 0.754 33 H -0.205 1.205 34 H -0.217 1.217 35 H 0.174 0.826 36 H 0.112 0.888 37 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -0.635 4.828 1.489 5.092 hybrid contribution -0.973 0.013 -0.039 0.974 sum -1.608 4.841 1.450 5.303 Atomic orbital electron populations 1.22951 0.79921 1.03683 1.00727 1.87922 1.21135 1.28094 1.94648 1.23892 0.94217 0.85333 0.96138 0.88020 1.23552 0.95227 1.00050 0.98351 1.21560 0.99474 0.80083 0.97241 0.88812 1.45353 1.37102 1.04714 1.47946 1.17627 0.80300 0.85143 0.78833 1.90731 1.33806 1.83758 1.38246 1.20150 1.05682 0.91534 1.10300 1.20561 0.96826 0.85201 0.97286 1.20630 0.93710 1.04888 0.96261 1.41674 1.27192 1.08673 1.35811 1.20686 0.95831 0.95985 1.00657 1.24591 1.00262 1.06519 0.83511 1.86520 1.35154 1.94017 1.19897 0.94336 0.89134 0.72466 0.77104 1.21965 1.00102 0.92965 1.01236 1.23985 0.97963 1.00875 0.97753 0.92804 0.93585 0.88985 0.88957 0.87839 0.75227 0.90048 0.88653 0.89937 0.73097 0.85947 0.75356 1.20517 1.21738 0.82583 0.88845 0.91405 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 10.85 113.37 1.23 1.21 16 2 O -0.40 -1.72 10.71 -148.98 -1.60 -3.32 16 3 C 0.06 0.03 4.19 31.12 0.13 0.16 16 4 H 0.10 -0.31 7.87 -2.39 -0.02 -0.33 16 5 C -0.13 0.06 7.65 31.12 0.24 0.29 16 6 C 0.12 0.34 4.33 45.58 0.20 0.54 16 7 H 0.09 0.63 7.47 -2.39 -0.02 0.61 16 8 N -0.70 -1.60 5.26 -443.16 -2.33 -3.93 16 9 C 0.59 4.64 7.81 86.62 0.68 5.32 16 10 O -0.58 -8.49 14.41 -4.11 -0.06 -8.55 16 11 C -0.27 -1.15 6.29 -19.04 -0.12 -1.27 16 12 C 0.12 0.16 7.17 41.78 0.30 0.46 16 13 C -0.10 0.04 9.88 71.23 0.70 0.74 16 14 N -0.53 2.05 5.41 -171.08 -0.93 1.12 16 15 C -0.02 0.06 6.09 40.98 0.25 0.31 16 16 C -0.04 0.17 2.98 71.23 0.21 0.39 16 17 O -0.55 1.97 12.88 -148.98 -1.92 0.05 16 18 Si 0.77 -5.09 30.96 68.60 2.12 -2.97 16 19 C -0.14 -0.04 10.45 23.62 0.25 0.21 16 20 C -0.17 -0.44 7.72 31.18 0.24 -0.20 16 21 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 22 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 23 H 0.09 -0.21 8.14 -2.38 -0.02 -0.23 16 24 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 25 H 0.10 0.03 8.14 -2.39 -0.02 0.01 16 26 H 0.41 -1.09 7.83 -92.71 -0.73 -1.82 16 27 H 0.08 -0.05 8.14 -2.39 -0.02 -0.06 16 28 H 0.09 -0.61 8.14 -2.38 -0.02 -0.63 16 29 H 0.08 0.40 6.47 -2.39 -0.02 0.38 16 30 H 0.43 -4.17 6.72 -92.71 -0.62 -4.79 16 31 H 0.12 -0.49 7.96 -2.38 -0.02 -0.51 16 32 H 0.40 -4.41 8.70 -74.05 -0.64 -5.05 16 33 H -0.28 0.56 7.11 99.48 0.71 1.27 16 34 H -0.29 -0.40 7.11 99.48 0.71 0.31 16 35 H 0.16 -0.45 7.70 -2.91 -0.02 -0.47 16 36 H 0.09 0.36 8.14 -2.39 -0.02 0.34 16 37 H 0.07 0.25 8.14 -2.39 -0.02 0.23 16 Total: 0.00 -19.51 313.25 -1.25 -20.76 By element: Atomic # 1 Polarization: -10.50 SS G_CDS: -0.85 Total: -11.34 kcal Atomic # 6 Polarization: 3.86 SS G_CDS: 4.31 Total: 8.16 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -3.26 Total: -2.81 kcal Atomic # 8 Polarization: -8.24 SS G_CDS: -3.57 Total: -11.81 kcal Atomic # 14 Polarization: -5.09 SS G_CDS: 2.12 Total: -2.97 kcal Total: -19.51 -1.25 -20.76 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_9865296.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.827 kcal (2) G-P(sol) polarization free energy of solvation -19.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.249 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.764 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.590 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds