Wall clock time and date at job start Sat Mar 6 2021 18:27:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42907 * 114.00164 * 2 1 4 4 H 1.08995 * 112.84671 * 18.81099 * 3 2 1 5 5 C 1.53781 * 113.61285 * 150.00049 * 3 2 1 6 6 C 1.53777 * 87.07800 * 140.06661 * 5 3 2 7 7 H 1.09007 * 113.61559 * 89.11956 * 6 5 3 8 8 C 1.53005 * 113.61350 * 219.93251 * 6 5 3 9 9 N 1.46503 * 109.46784 * 183.47221 * 8 6 5 10 10 C 1.34781 * 119.99751 * 179.97438 * 9 8 6 11 11 O 1.21283 * 119.99602 * 0.02562 * 10 9 8 12 12 C 1.50699 * 120.00024 * 180.02562 * 10 9 8 13 13 C 1.52999 * 109.46938 * 65.00220 * 12 10 9 14 14 O 1.42897 * 109.46993 * 185.00440 * 12 10 9 15 15 C 1.35906 * 116.99917 * 155.32349 * 14 12 10 16 16 C 1.38728 * 120.05532 * 5.08486 * 15 14 12 17 17 C 1.38147 * 119.94416 * 179.74415 * 16 15 14 18 18 C 1.38270 * 120.05006 * 0.50538 * 17 16 15 19 19 C 1.50702 * 119.93818 * 179.74304 * 18 17 16 20 20 O 1.42893 * 109.47484 * 245.02010 * 19 18 17 21 21 Si 1.86295 * 109.47262 * 5.02773 * 19 18 17 22 22 C 1.38263 * 120.11569 * 359.76982 * 18 17 16 23 23 C 1.38143 * 120.05436 * 359.97438 * 22 18 17 24 24 C 1.53773 * 87.08572 * 334.56696 * 6 5 3 25 25 H 1.09001 * 109.47436 * 59.99108 * 1 2 3 26 26 H 1.08999 * 109.47445 * 180.02562 * 1 2 3 27 27 H 1.08999 * 109.47151 * 299.99910 * 1 2 3 28 28 H 1.09003 * 113.61455 * 25.51988 * 5 3 2 29 29 H 1.08999 * 113.69045 * 254.63029 * 5 3 2 30 30 H 1.09000 * 109.47084 * 303.47173 * 8 6 5 31 31 H 1.08998 * 109.47053 * 63.47762 * 8 6 5 32 32 H 0.96996 * 120.00390 * 0.02562 * 9 8 6 33 33 H 1.09005 * 109.47061 * 305.00195 * 12 10 9 34 34 H 1.08999 * 109.46974 * 299.99667 * 13 12 10 35 35 H 1.08991 * 109.46878 * 60.00467 * 13 12 10 36 36 H 1.09002 * 109.46981 * 180.02562 * 13 12 10 37 37 H 1.08001 * 120.02899 * 359.97438 * 16 15 14 38 38 H 1.07999 * 119.97423 * 180.23271 * 17 16 15 39 39 H 1.09006 * 109.46581 * 125.02391 * 19 18 17 40 40 H 0.96695 * 114.00295 * 180.02562 * 20 19 18 41 41 H 1.48505 * 109.99914 * 178.67801 * 21 19 18 42 42 H 1.48498 * 109.99916 * 299.99357 * 21 19 18 43 43 H 1.07997 * 119.97155 * 180.02562 * 22 18 17 44 44 H 1.08002 * 120.02858 * 179.97438 * 23 22 18 45 45 H 1.08999 * 113.61693 * 139.97816 * 24 6 5 46 46 H 1.09000 * 113.61473 * 270.88440 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0788 0.3239 5 6 3.3755 1.3719 0.7045 6 6 3.8219 2.3199 -0.4210 7 1 3.6208 3.3707 -0.2123 8 6 5.2544 2.0726 -0.8985 9 7 5.6124 3.0730 -1.9071 10 6 6.8355 3.0517 -2.4729 11 8 7.6395 2.2040 -2.1474 12 6 7.2040 4.0811 -3.5100 13 6 7.2254 5.4688 -2.8660 14 8 8.4969 3.7818 -4.0398 15 6 8.7755 4.2460 -5.2864 16 6 7.8664 5.0627 -5.9429 17 6 8.1542 5.5375 -7.2079 18 6 9.3427 5.1909 -7.8237 19 6 9.6515 5.7057 -9.2060 20 8 9.7079 4.6096 -10.1210 21 14 8.3177 6.8919 -9.7393 22 6 10.2479 4.3725 -7.1738 23 6 9.9670 3.8993 -5.9067 24 6 2.7531 1.6511 -1.3013 25 1 -0.3634 0.5140 -0.8899 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 3.9094 0.4216 0.7124 29 1 3.3395 1.8453 1.6857 30 1 5.9376 2.1488 -0.0526 31 1 5.3252 1.0760 -1.3342 32 1 4.9695 3.7512 -2.1671 33 1 6.4690 4.0653 -4.3148 34 1 6.2391 5.6971 -2.4620 35 1 7.9604 5.4845 -2.0613 36 1 7.4915 6.2134 -3.6162 37 1 6.9360 5.3300 -5.4640 38 1 7.4485 6.1764 -7.7179 39 1 10.6125 6.2202 -9.1958 40 1 9.9035 4.8674 -11.0322 41 1 8.6272 7.4311 -11.0880 42 1 7.0026 6.2026 -9.7574 43 1 11.1756 4.1036 -7.6568 44 1 10.6743 3.2597 -5.3995 45 1 2.2132 2.3504 -1.9397 46 1 3.1168 0.7772 -1.8418 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_10157680.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:27:22 Heat of formation + Delta-G solvation = -89.271793 kcal Electronic energy + Delta-G solvation = -26520.383601 eV Core-core repulsion = 22571.418052 eV Total energy + Delta-G solvation = -3948.965549 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.73178 -40.89921 -40.19468 -38.92621 -37.50872 -37.26570 -35.36743 -33.41593 -31.88222 -31.63821 -29.25000 -27.53282 -26.82583 -26.63589 -25.32867 -24.11296 -23.27028 -22.22858 -21.49145 -20.59689 -19.46720 -18.71376 -18.49839 -17.65481 -17.25759 -16.92522 -16.76914 -16.65404 -16.57954 -16.24205 -15.92715 -15.64107 -15.46038 -15.23017 -14.98135 -14.56994 -14.27345 -14.18175 -13.95059 -13.69030 -13.67117 -13.56654 -13.53051 -13.42099 -12.98207 -12.88752 -12.58632 -12.34959 -12.18786 -12.06475 -11.86729 -11.82201 -11.63603 -11.54486 -10.77144 -10.50374 -10.47244 -10.16312 -9.97654 -9.14409 -4.99404 0.33766 0.36053 1.27144 1.50579 1.52629 1.56850 1.93012 2.48263 2.66416 2.77341 3.30861 3.37761 3.40429 3.51142 3.61188 3.67036 3.69744 3.75076 3.80638 3.83813 3.94326 3.97294 4.14735 4.25090 4.30572 4.34829 4.38109 4.40337 4.46976 4.55215 4.59051 4.60932 4.70019 4.70815 4.73132 4.76953 4.87825 4.91819 5.00506 5.02048 5.15924 5.22542 5.30896 5.33475 5.56903 5.73068 6.20829 6.26183 6.41363 6.45390 7.11695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.089 0.911 5 C -0.127 4.127 6 C -0.124 4.124 7 H 0.100 0.900 8 C 0.133 3.867 9 N -0.725 5.725 10 C 0.517 3.483 11 O -0.512 6.512 12 C 0.066 3.934 13 C -0.177 4.177 14 O -0.283 6.283 15 C 0.135 3.865 16 C -0.208 4.208 17 C -0.074 4.074 18 C -0.111 4.111 19 C -0.071 4.071 20 O -0.536 6.536 21 Si 0.681 3.319 22 C -0.050 4.050 23 C -0.146 4.146 24 C -0.152 4.152 25 H 0.042 0.958 26 H 0.086 0.914 27 H 0.042 0.958 28 H 0.096 0.904 29 H 0.078 0.922 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.401 0.599 33 H 0.100 0.900 34 H 0.079 0.921 35 H 0.077 0.923 36 H 0.080 0.920 37 H 0.134 0.866 38 H 0.130 0.870 39 H 0.075 0.925 40 H 0.379 0.621 41 H -0.262 1.262 42 H -0.256 1.256 43 H 0.133 0.867 44 H 0.136 0.864 45 H 0.071 0.929 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.656 6.518 0.741 8.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.107 0.893 5 C -0.165 4.165 6 C -0.143 4.143 7 H 0.119 0.881 8 C 0.010 3.990 9 N -0.380 5.380 10 C 0.301 3.699 11 O -0.385 6.385 12 C 0.006 3.994 13 C -0.234 4.234 14 O -0.196 6.196 15 C 0.090 3.910 16 C -0.226 4.226 17 C -0.091 4.091 18 C -0.111 4.111 19 C -0.181 4.181 20 O -0.344 6.344 21 Si 0.583 3.417 22 C -0.068 4.068 23 C -0.164 4.164 24 C -0.189 4.189 25 H 0.060 0.940 26 H 0.105 0.895 27 H 0.061 0.939 28 H 0.115 0.885 29 H 0.096 0.904 30 H 0.092 0.908 31 H 0.092 0.908 32 H 0.236 0.764 33 H 0.117 0.883 34 H 0.098 0.902 35 H 0.096 0.904 36 H 0.099 0.901 37 H 0.151 0.849 38 H 0.147 0.853 39 H 0.093 0.907 40 H 0.227 0.773 41 H -0.187 1.187 42 H -0.181 1.181 43 H 0.150 0.850 44 H 0.154 0.846 45 H 0.090 0.910 46 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -4.582 5.437 1.079 7.192 hybrid contribution -0.285 0.027 -1.141 1.176 sum -4.867 5.463 -0.062 7.317 Atomic orbital electron populations 1.22815 0.80911 1.03056 0.99980 1.87966 1.19868 1.27138 1.94541 1.23688 0.93918 0.85571 0.96614 0.89347 1.23210 0.95340 1.00228 0.97686 1.22570 0.93581 1.00138 0.98013 0.88136 1.21373 0.94604 0.91999 0.91015 1.45834 1.14863 1.34194 1.43063 1.20084 0.82126 0.85318 0.82331 1.90785 1.49176 1.37207 1.61346 1.22193 0.86078 0.94915 0.96232 1.22354 1.04035 0.94245 1.02814 1.86232 1.32100 1.73008 1.28221 1.19074 0.94576 0.93397 0.83955 1.21170 1.00858 1.03336 0.97280 1.20756 0.95500 0.98312 0.94555 1.19144 0.95639 1.01701 0.94636 1.24735 1.08554 0.95209 0.89605 1.86602 1.93781 1.32593 1.21382 0.95149 0.78081 0.83747 0.84737 1.20834 0.99049 0.94111 0.92808 1.20517 0.96524 1.03828 0.95580 1.23631 0.97075 1.01072 0.97160 0.93970 0.89499 0.93902 0.88521 0.90354 0.90798 0.90795 0.76425 0.88262 0.90243 0.90410 0.90135 0.84876 0.85299 0.90669 0.77335 1.18706 1.18085 0.84952 0.84622 0.91038 0.88789 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.56 10.72 -35.23 -0.38 -0.94 16 3 C 0.06 -0.06 4.31 -25.92 -0.11 -0.17 16 4 H 0.09 -0.21 7.87 -51.93 -0.41 -0.62 16 5 C -0.13 0.20 7.47 -25.92 -0.19 0.01 16 6 C -0.12 0.34 3.75 -89.81 -0.34 0.01 16 7 H 0.10 -0.42 8.14 -51.92 -0.42 -0.85 16 8 C 0.13 -0.11 5.50 -4.04 -0.02 -0.13 16 9 N -0.73 1.01 5.52 -60.29 -0.33 0.68 16 10 C 0.52 1.07 7.18 -10.98 -0.08 0.99 16 11 O -0.51 -3.66 16.51 -14.30 -0.24 -3.90 16 12 C 0.07 0.00 2.64 -27.88 -0.07 -0.07 16 13 C -0.18 0.43 9.12 37.16 0.34 0.77 16 14 O -0.28 -0.99 9.34 -39.30 -0.37 -1.35 16 15 C 0.14 0.34 6.60 -39.22 -0.26 0.08 16 16 C -0.21 -0.11 8.24 -39.43 -0.32 -0.43 16 17 C -0.07 -0.04 8.66 -39.60 -0.34 -0.39 16 18 C -0.11 -0.17 5.39 -104.60 -0.56 -0.73 16 19 C -0.07 -0.01 2.79 36.01 0.10 0.09 16 20 O -0.54 -0.81 12.81 -35.23 -0.45 -1.26 16 21 Si 0.68 -0.65 29.85 -169.99 -5.07 -5.72 16 22 C -0.05 -0.10 9.68 -39.61 -0.38 -0.48 16 23 C -0.15 -0.37 9.99 -39.43 -0.39 -0.77 16 24 C -0.15 0.28 7.47 -25.92 -0.19 0.09 16 25 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 27 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 29 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 31 H 0.07 0.05 7.88 -51.93 -0.41 -0.36 16 32 H 0.40 -1.84 8.25 -40.82 -0.34 -2.17 16 33 H 0.10 -0.22 6.31 -51.93 -0.33 -0.55 16 34 H 0.08 -0.39 7.92 -51.93 -0.41 -0.80 16 35 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 36 H 0.08 -0.24 6.91 -51.93 -0.36 -0.59 16 37 H 0.13 -0.29 5.43 -52.49 -0.29 -0.58 16 38 H 0.13 -0.17 4.86 -52.49 -0.26 -0.43 16 39 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 40 H 0.38 -0.94 8.74 45.56 0.40 -0.54 16 41 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 42 H -0.26 -0.52 7.05 56.52 0.40 -0.12 16 43 H 0.13 0.10 8.06 -52.49 -0.42 -0.33 16 44 H 0.14 0.27 8.06 -52.49 -0.42 -0.16 16 45 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 46 H 0.09 -0.04 7.92 -51.93 -0.41 -0.45 16 LS Contribution 377.92 15.07 5.70 5.70 Total: 0.00 -10.04 377.92 -9.95 -20.00 By element: Atomic # 1 Polarization: -6.06 SS G_CDS: -7.07 Total: -13.13 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -1.74 Total: -0.07 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -0.33 Total: 0.68 kcal Atomic # 8 Polarization: -6.02 SS G_CDS: -1.43 Total: -7.45 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.07 Total: -5.72 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -10.04 -9.95 -20.00 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_10157680.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.276 kcal (2) G-P(sol) polarization free energy of solvation -10.042 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.953 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.272 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds