Wall clock time and date at job start Sat Mar 6 2021 18:27:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42901 * 113.99879 * 2 1 4 4 H 1.08999 * 112.85092 * 341.19476 * 3 2 1 5 5 C 1.53778 * 113.61197 * 112.50550 * 3 2 1 6 6 C 1.53781 * 87.08481 * 139.97881 * 5 3 2 7 7 H 1.09002 * 113.68902 * 89.11768 * 6 5 3 8 8 C 1.52992 * 113.61802 * 220.01739 * 6 5 3 9 9 N 1.46498 * 109.47162 * 272.49626 * 8 6 5 10 10 C 1.34777 * 120.00408 * 179.97438 * 9 8 6 11 11 O 1.21723 * 119.99556 * 359.97438 * 10 9 8 12 12 C 1.46559 * 120.00230 * 179.97438 * 10 9 8 13 13 C 1.40853 * 126.58007 * 179.97438 * 12 10 9 14 14 C 1.40096 * 132.86422 * 0.33005 * 13 12 10 15 15 C 1.36456 * 119.25172 * 180.17161 * 14 13 12 16 16 C 1.50696 * 120.29197 * 179.78360 * 15 14 13 17 17 O 1.42903 * 109.47131 * 239.71860 * 16 15 14 18 18 Si 1.86305 * 109.47185 * 119.72401 * 16 15 14 19 19 C 1.40162 * 119.40903 * 359.51015 * 15 14 13 20 20 C 1.35188 * 120.31758 * 0.25001 * 19 15 14 21 21 N 1.36238 * 120.70777 * 0.02562 * 20 19 15 22 22 N 1.40017 * 132.01448 * 179.97438 * 21 20 19 23 23 C 1.30732 * 109.60933 * 179.97438 * 22 21 20 24 24 C 1.53782 * 87.07946 * 334.56674 * 6 5 3 25 25 H 1.08992 * 109.47163 * 300.00174 * 1 2 3 26 26 H 1.09002 * 109.46701 * 60.00056 * 1 2 3 27 27 H 1.09005 * 109.46985 * 179.97438 * 1 2 3 28 28 H 1.08995 * 113.61735 * 25.43059 * 5 3 2 29 29 H 1.09002 * 113.61072 * 254.52265 * 5 3 2 30 30 H 1.08996 * 109.47348 * 152.49260 * 8 6 5 31 31 H 1.09000 * 109.47082 * 32.49314 * 8 6 5 32 32 H 0.97000 * 120.00073 * 359.97438 * 9 8 6 33 33 H 1.07996 * 120.37411 * 359.95414 * 14 13 12 34 34 H 1.08999 * 109.47358 * 359.72220 * 16 15 14 35 35 H 0.96700 * 114.00311 * 300.00591 * 17 16 15 36 36 H 1.48499 * 109.99670 * 58.67633 * 18 16 15 37 37 H 1.48497 * 110.00233 * 179.97438 * 18 16 15 38 38 H 1.08000 * 119.83824 * 180.27076 * 19 15 14 39 39 H 1.07996 * 119.64199 * 179.97438 * 20 19 15 40 40 H 1.07998 * 125.63084 * 179.97438 * 23 22 21 41 41 H 1.09000 * 113.61915 * 139.97758 * 24 6 5 42 42 H 1.09004 * 113.61593 * 270.80040 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0789 -0.3238 5 6 2.7535 1.6488 1.3017 6 6 3.8228 2.3181 0.4223 7 1 3.6236 3.3694 0.2143 8 6 5.2543 2.0680 0.9007 9 7 5.6261 3.0886 1.8837 10 6 6.8505 3.0679 2.4465 11 8 7.6473 2.2009 2.1383 12 6 7.2226 4.0893 3.4295 13 6 8.4563 4.1988 4.1002 14 6 9.6359 3.4445 4.0550 15 6 10.6884 3.8046 4.8452 16 6 11.9667 3.0070 4.8188 17 8 12.2342 2.4924 6.1249 18 14 13.3733 4.1055 4.2842 19 6 10.5720 4.9264 5.6775 20 6 9.4257 5.6425 5.7011 21 7 8.3674 5.2876 4.9200 22 7 7.0932 5.8451 4.7585 23 6 6.4161 5.1466 3.8851 24 6 3.3756 1.3719 -0.7045 25 1 -0.3633 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 3.1167 0.7740 1.8409 29 1 2.2141 2.3477 1.9411 30 1 5.9352 2.1168 0.0509 31 1 5.3167 1.0814 1.3600 32 1 4.9909 3.7793 2.1295 33 1 9.7102 2.5855 3.4046 34 1 11.8644 2.1798 4.1163 35 1 12.3372 3.1742 6.8028 36 1 13.5027 5.2544 5.2161 37 1 14.6398 3.3308 4.2547 38 1 11.4023 5.2202 6.3025 39 1 9.3477 6.5047 6.3468 40 1 5.4041 5.3483 3.5665 41 1 3.3384 1.8471 -1.6848 42 1 3.9099 0.4218 -0.7147 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_11618758.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:27:31 Heat of formation + Delta-G solvation = 22.308244 kcal Electronic energy + Delta-G solvation = -25692.914938 eV Core-core repulsion = 21835.703571 eV Total energy + Delta-G solvation = -3857.211368 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -43.29345 -40.84592 -39.94457 -39.32067 -37.39622 -37.32564 -35.06546 -34.20940 -32.11263 -30.76104 -28.98116 -27.56450 -27.03528 -26.68280 -25.03111 -23.89364 -23.21144 -22.75973 -21.35269 -20.50963 -19.05965 -18.67392 -18.04740 -17.86455 -17.29200 -16.96495 -16.75852 -16.62058 -16.44953 -16.22404 -15.90214 -15.79911 -15.50840 -15.26493 -14.83136 -14.53470 -14.28689 -14.04486 -13.84526 -13.57628 -13.51165 -13.44869 -13.25828 -12.88861 -12.51389 -12.46837 -12.11512 -11.98320 -11.90773 -11.73195 -11.56200 -11.43988 -10.90884 -10.71954 -10.43637 -10.36522 -9.95321 -8.75629 -5.05607 -0.55511 -0.15978 0.99362 1.08129 1.12396 1.47925 1.80744 2.06712 2.29065 2.64027 2.84238 3.05478 3.14442 3.27727 3.41738 3.46849 3.56153 3.62990 3.76484 3.77642 3.84883 3.97838 4.06722 4.13874 4.24707 4.25628 4.39057 4.40924 4.45262 4.50602 4.68232 4.71004 4.72954 4.76807 4.81779 4.88336 4.98356 5.07623 5.11475 5.16090 5.26173 5.28603 5.57339 5.63730 6.21889 6.26950 6.31176 6.65222 7.44045 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.059 3.941 4 H 0.088 0.912 5 C -0.151 4.151 6 C -0.124 4.124 7 H 0.100 0.900 8 C 0.136 3.864 9 N -0.728 5.728 10 C 0.600 3.400 11 O -0.549 6.549 12 C -0.314 4.314 13 C 0.169 3.831 14 C -0.089 4.089 15 C -0.066 4.066 16 C -0.076 4.076 17 O -0.521 6.521 18 Si 0.696 3.304 19 C -0.162 4.162 20 C 0.123 3.877 21 N -0.267 5.267 22 N -0.314 5.314 23 C 0.120 3.880 24 C -0.127 4.127 25 H 0.041 0.959 26 H 0.042 0.958 27 H 0.086 0.914 28 H 0.093 0.907 29 H 0.070 0.930 30 H 0.072 0.928 31 H 0.072 0.928 32 H 0.398 0.602 33 H 0.165 0.835 34 H 0.127 0.873 35 H 0.375 0.625 36 H -0.253 1.253 37 H -0.247 1.247 38 H 0.156 0.844 39 H 0.177 0.823 40 H 0.198 0.802 41 H 0.077 0.923 42 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.630 4.277 -0.887 4.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.001 3.999 4 H 0.106 0.894 5 C -0.189 4.189 6 C -0.143 4.143 7 H 0.118 0.882 8 C 0.012 3.988 9 N -0.380 5.380 10 C 0.389 3.611 11 O -0.428 6.428 12 C -0.329 4.329 13 C 0.048 3.952 14 C -0.109 4.109 15 C -0.072 4.072 16 C -0.184 4.184 17 O -0.327 6.327 18 Si 0.594 3.406 19 C -0.183 4.183 20 C -0.003 4.003 21 N -0.031 5.031 22 N -0.134 5.134 23 C -0.061 4.061 24 C -0.165 4.165 25 H 0.060 0.940 26 H 0.061 0.939 27 H 0.104 0.896 28 H 0.112 0.888 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.232 0.768 33 H 0.183 0.817 34 H 0.144 0.856 35 H 0.223 0.777 36 H -0.177 1.177 37 H -0.171 1.171 38 H 0.174 0.826 39 H 0.194 0.806 40 H 0.215 0.785 41 H 0.095 0.905 42 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.388 4.326 -0.440 4.365 hybrid contribution -0.969 0.006 0.849 1.288 sum -1.357 4.332 0.408 4.558 Atomic orbital electron populations 1.22810 0.80991 1.02993 0.99958 1.87965 1.19799 1.27224 1.94557 1.23708 0.93915 0.85485 0.96748 0.89401 1.23626 0.97085 1.01066 0.97081 1.22571 0.93871 1.00017 0.97838 0.88231 1.21294 0.94169 0.91660 0.91633 1.45675 1.15321 1.32337 1.44628 1.16813 0.81433 0.83318 0.79562 1.90792 1.50560 1.38048 1.63372 1.19634 0.95154 1.05738 1.12374 1.19297 0.95482 0.88609 0.91792 1.20706 0.88890 1.00525 1.00773 1.20414 0.96654 0.95018 0.95125 1.25082 0.99691 1.04685 0.88984 1.86710 1.92947 1.36132 1.16952 0.94407 0.76947 0.78595 0.90606 1.20703 0.97934 0.96697 1.03016 1.21508 0.84056 1.00546 0.94208 1.46072 1.11040 1.19027 1.26960 1.77633 0.88440 1.22613 1.24706 1.24062 0.99418 0.90903 0.91735 1.23211 0.95292 1.00274 0.97685 0.93985 0.93940 0.89553 0.88802 0.91099 0.91020 0.91003 0.76832 0.81708 0.85558 0.77725 1.17701 1.17133 0.82615 0.80587 0.78509 0.90465 0.88552 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.69 10.71 -35.23 -0.38 -1.07 16 3 C 0.06 -0.03 4.31 -25.92 -0.11 -0.14 16 4 H 0.09 -0.17 7.87 -51.93 -0.41 -0.58 16 5 C -0.15 0.19 7.46 -25.92 -0.19 0.00 16 6 C -0.12 0.26 3.75 -89.81 -0.34 -0.08 16 7 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 8 C 0.14 -0.02 5.51 -4.05 -0.02 -0.05 16 9 N -0.73 0.10 5.55 -61.66 -0.34 -0.24 16 10 C 0.60 1.88 7.78 -12.91 -0.10 1.77 16 11 O -0.55 -3.52 15.71 5.17 0.08 -3.44 16 12 C -0.31 -0.77 6.17 -104.68 -0.65 -1.42 16 13 C 0.17 0.47 6.76 -84.07 -0.57 -0.10 16 14 C -0.09 -0.14 9.35 -39.53 -0.37 -0.51 16 15 C -0.07 0.04 4.53 -104.55 -0.47 -0.44 16 16 C -0.08 0.09 2.84 36.00 0.10 0.19 16 17 O -0.52 -0.04 12.88 -35.23 -0.45 -0.50 16 18 Si 0.70 -1.51 31.97 -169.99 -5.43 -6.94 16 19 C -0.16 0.33 8.38 -39.95 -0.33 -0.01 16 20 C 0.12 -0.11 11.17 -16.68 -0.19 -0.30 16 21 N -0.27 -0.54 3.86 -10.55 -0.04 -0.58 16 22 N -0.31 -0.80 12.57 30.75 0.39 -0.41 16 23 C 0.12 0.07 11.44 -17.15 -0.20 -0.12 16 24 C -0.13 0.14 7.47 -25.92 -0.19 -0.05 16 25 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 27 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 29 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 30 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 31 H 0.07 0.09 7.84 -51.93 -0.41 -0.32 16 32 H 0.40 -1.18 7.39 -40.82 -0.30 -1.48 16 33 H 0.17 0.30 7.01 -52.49 -0.37 -0.07 16 34 H 0.13 -0.19 7.71 -51.93 -0.40 -0.60 16 35 H 0.37 -1.33 8.08 45.56 0.37 -0.96 16 36 H -0.25 0.28 7.05 56.52 0.40 0.68 16 37 H -0.25 -0.27 7.11 56.52 0.40 0.14 16 38 H 0.16 -0.75 7.26 -52.49 -0.38 -1.13 16 39 H 0.18 -0.65 8.06 -52.49 -0.42 -1.07 16 40 H 0.20 -0.73 7.46 -52.49 -0.39 -1.12 16 41 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 42 H 0.10 -0.02 8.10 -51.93 -0.42 -0.44 16 LS Contribution 356.85 15.07 5.38 5.38 Total: 0.00 -10.03 356.85 -9.04 -19.07 By element: Atomic # 1 Polarization: -5.41 SS G_CDS: -5.70 Total: -11.11 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -2.53 Total: -0.16 kcal Atomic # 7 Polarization: -1.23 SS G_CDS: 0.00 Total: -1.23 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -0.75 Total: -5.00 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.43 Total: -6.94 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -10.03 -9.04 -19.07 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_11618758.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.378 kcal (2) G-P(sol) polarization free energy of solvation -10.029 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.349 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.070 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds