Wall clock time and date at job start Sat Mar 6 2021 18:27:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42901 * 114.00258 * 2 1 4 4 H 1.09002 * 112.84974 * 339.66626 * 3 2 1 5 5 C 1.53785 * 113.69063 * 110.93650 * 3 2 1 6 6 C 1.53779 * 87.08093 * 139.99216 * 5 3 2 7 7 H 1.09003 * 113.61186 * 89.11185 * 6 5 3 8 8 C 1.52999 * 113.61451 * 220.01770 * 6 5 3 9 9 N 1.46504 * 109.47047 * 272.49902 * 8 6 5 10 10 C 1.34776 * 120.00093 * 179.97438 * 9 8 6 11 11 O 1.21578 * 119.99603 * 0.02562 * 10 9 8 12 12 C 1.47684 * 120.00270 * 179.97438 * 10 9 8 13 13 C 1.39817 * 120.16962 * 180.02562 * 12 10 9 14 14 F 1.35098 * 120.10846 * 0.02562 * 13 12 10 15 15 C 1.38321 * 119.78180 * 180.02562 * 13 12 10 16 16 C 1.38201 * 120.11975 * 359.97438 * 15 13 12 17 17 C 1.38464 * 120.33459 * 0.02562 * 16 15 13 18 18 C 1.50707 * 119.88803 * 180.02562 * 17 16 15 19 19 O 1.42902 * 109.47055 * 245.00143 * 18 17 16 20 20 Si 1.86303 * 109.46934 * 5.00016 * 18 17 16 21 21 C 1.37856 * 120.21961 * 359.72205 * 17 16 15 22 22 C 1.53781 * 113.61413 * 208.47320 * 3 2 1 23 23 H 1.09002 * 109.46781 * 300.00325 * 1 2 3 24 24 H 1.09002 * 109.46817 * 60.00169 * 1 2 3 25 25 H 1.08995 * 109.47317 * 179.97438 * 1 2 3 26 26 H 1.09003 * 113.60734 * 254.54335 * 5 3 2 27 27 H 1.08996 * 113.61146 * 25.43833 * 5 3 2 28 28 H 1.09003 * 109.47100 * 32.49589 * 8 6 5 29 29 H 1.08995 * 109.47213 * 152.50009 * 8 6 5 30 30 H 0.97002 * 119.99937 * 359.97438 * 9 8 6 31 31 H 1.08008 * 119.94323 * 179.97438 * 15 13 12 32 32 H 1.07999 * 119.83515 * 180.02562 * 16 15 13 33 33 H 1.08997 * 109.47193 * 124.99948 * 18 17 16 34 34 H 0.96702 * 113.99984 * 59.99492 * 19 18 17 35 35 H 1.48497 * 110.00120 * 58.68241 * 20 18 17 36 36 H 1.48506 * 109.99498 * 180.02562 * 20 18 17 37 37 H 1.08004 * 120.06116 * 180.28046 * 21 17 16 38 38 H 1.09005 * 113.61302 * 334.47944 * 22 3 2 39 39 H 1.08996 * 113.61527 * 105.30108 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3220 2.0752 -0.3490 5 6 2.7213 1.6652 1.3153 6 6 3.8114 2.3246 0.4540 7 1 3.6155 3.3730 0.2291 8 6 5.2310 2.0813 0.9703 9 7 5.5781 3.1142 1.9496 10 6 6.7885 3.1013 2.5424 11 8 7.5924 2.2327 2.2640 12 6 7.1386 4.1427 3.5292 13 6 8.3934 4.1330 4.1458 14 9 9.2910 3.1705 3.8407 15 6 8.7127 5.1120 5.0693 16 6 7.7949 6.0970 5.3812 17 6 6.5508 6.1114 4.7735 18 6 5.5578 7.1905 5.1207 19 8 4.4235 6.6053 5.7633 20 14 6.3552 8.4221 6.2688 21 6 6.2199 5.1454 3.8473 22 6 3.3923 1.3643 -0.6718 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 -1.0276 -0.0005 26 1 2.1660 2.3713 1.9327 27 1 3.0715 0.7972 1.8738 28 1 5.2826 1.1005 1.4430 29 1 5.9324 2.1205 0.1369 30 1 4.9368 3.8074 2.1714 31 1 9.6812 5.1068 5.5475 32 1 8.0492 6.8594 6.1026 33 1 5.2383 7.6969 4.2099 34 1 4.6340 6.1367 6.5826 35 1 7.5547 9.0146 5.6244 36 1 5.3859 9.4912 6.6192 37 1 5.2504 5.1616 3.3715 38 1 3.9262 0.4141 -0.6564 39 1 3.3787 1.8262 -1.6589 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:27:40 Heat of formation + Delta-G solvation = -99.186087 kcal Electronic energy + Delta-G solvation = -23472.616231 eV Core-core repulsion = 19683.524220 eV Total energy + Delta-G solvation = -3789.092011 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -49.85231 -41.37765 -40.62866 -39.74647 -37.64629 -37.41774 -35.32968 -32.88264 -32.38593 -29.24368 -27.50343 -26.78152 -26.74089 -25.34899 -23.69313 -22.72028 -21.66132 -20.64045 -19.32601 -18.37261 -18.28569 -17.88704 -17.26651 -16.91750 -16.72404 -16.58098 -16.38908 -16.23011 -15.96312 -15.83587 -15.67637 -15.27657 -14.77458 -14.39714 -14.34604 -14.19602 -13.82245 -13.61795 -13.50137 -13.25400 -12.92223 -12.88111 -12.55567 -12.29536 -12.05003 -11.98504 -11.81011 -11.51152 -11.02011 -10.60320 -10.47855 -10.43533 -10.10445 -9.85569 -5.19019 -0.52125 -0.12040 1.10448 1.48471 1.66790 1.83799 1.98958 2.48458 2.79486 3.00913 3.20855 3.32923 3.37499 3.43746 3.47902 3.56336 3.69833 3.72924 3.87210 3.98911 4.00957 4.18201 4.25137 4.37207 4.42730 4.43227 4.61469 4.63175 4.64823 4.73327 4.73668 4.76257 4.81641 4.84247 4.91636 5.02044 5.04923 5.19089 5.37486 5.52193 6.23284 6.37349 6.37845 7.14062 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.088 0.912 5 C -0.152 4.152 6 C -0.125 4.125 7 H 0.100 0.900 8 C 0.133 3.867 9 N -0.724 5.724 10 C 0.557 3.443 11 O -0.520 6.520 12 C -0.174 4.174 13 C 0.167 3.833 14 F -0.110 7.110 15 C -0.156 4.156 16 C -0.059 4.059 17 C -0.141 4.141 18 C -0.066 4.066 19 O -0.538 6.538 20 Si 0.686 3.314 21 C -0.031 4.031 22 C -0.126 4.126 23 H 0.042 0.958 24 H 0.042 0.958 25 H 0.086 0.914 26 H 0.071 0.929 27 H 0.094 0.906 28 H 0.075 0.925 29 H 0.074 0.926 30 H 0.400 0.600 31 H 0.150 0.850 32 H 0.142 0.858 33 H 0.117 0.883 34 H 0.381 0.619 35 H -0.255 1.255 36 H -0.252 1.252 37 H 0.138 0.862 38 H 0.096 0.904 39 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.430 3.861 2.695 5.825 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.106 0.894 5 C -0.190 4.190 6 C -0.144 4.144 7 H 0.118 0.882 8 C 0.010 3.990 9 N -0.376 5.376 10 C 0.343 3.657 11 O -0.396 6.396 12 C -0.178 4.178 13 C 0.146 3.854 14 F -0.088 7.088 15 C -0.175 4.175 16 C -0.077 4.077 17 C -0.142 4.142 18 C -0.177 4.177 19 O -0.344 6.344 20 Si 0.587 3.413 21 C -0.050 4.050 22 C -0.164 4.164 23 H 0.060 0.940 24 H 0.061 0.939 25 H 0.105 0.895 26 H 0.090 0.910 27 H 0.112 0.888 28 H 0.093 0.907 29 H 0.092 0.908 30 H 0.236 0.764 31 H 0.168 0.832 32 H 0.159 0.841 33 H 0.135 0.865 34 H 0.229 0.771 35 H -0.179 1.179 36 H -0.176 1.176 37 H 0.156 0.844 38 H 0.115 0.885 39 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -2.781 4.099 2.064 5.366 hybrid contribution -0.520 0.247 -0.560 0.803 sum -3.301 4.346 1.504 5.661 Atomic orbital electron populations 1.22812 0.80927 1.03030 0.99989 1.87962 1.19855 1.27137 1.94554 1.23689 0.93930 0.85540 0.96629 0.89381 1.23644 0.97047 1.01075 0.97197 1.22575 0.93720 1.00095 0.97987 0.88222 1.21379 0.94803 0.91334 0.91528 1.45860 1.16115 1.31673 1.43992 1.17969 0.82111 0.84679 0.80900 1.90883 1.48897 1.37121 1.62736 1.20082 0.95282 0.99744 1.02683 1.17755 0.86190 0.86904 0.94519 1.91633 1.65450 1.60556 1.91195 1.21177 1.02098 0.94914 0.99322 1.21073 0.92217 0.96973 0.97434 1.20330 0.95949 0.98812 0.99082 1.25045 0.90064 0.99351 1.03253 1.86520 1.31190 1.74368 1.42316 0.94778 0.79718 0.79929 0.86854 1.21022 0.97980 0.91357 0.94646 1.23198 0.95260 1.00143 0.97753 0.93950 0.93928 0.89508 0.91008 0.88755 0.90691 0.90808 0.76441 0.83196 0.84091 0.86535 0.77123 1.17942 1.17623 0.84422 0.88503 0.90381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.68 10.72 -35.23 -0.38 -1.06 16 3 C 0.06 -0.03 4.30 -25.92 -0.11 -0.14 16 4 H 0.09 -0.16 7.88 -51.93 -0.41 -0.57 16 5 C -0.15 0.19 7.47 -25.92 -0.19 -0.01 16 6 C -0.13 0.24 3.75 -89.81 -0.34 -0.09 16 7 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 8 C 0.13 0.00 5.51 -4.04 -0.02 -0.02 16 9 N -0.72 0.02 5.51 -61.30 -0.34 -0.32 16 10 C 0.56 1.81 7.77 -12.40 -0.10 1.71 16 11 O -0.52 -3.90 15.34 5.30 0.08 -3.82 16 12 C -0.17 -0.25 5.88 -104.92 -0.62 -0.86 16 13 C 0.17 0.34 7.29 -38.96 -0.28 0.06 16 14 F -0.11 -0.55 15.55 2.25 0.04 -0.51 16 15 C -0.16 0.15 10.01 -39.56 -0.40 -0.24 16 16 C -0.06 0.15 8.66 -39.51 -0.34 -0.19 16 17 C -0.14 0.29 5.34 -104.67 -0.56 -0.27 16 18 C -0.07 0.18 2.80 36.01 0.10 0.28 16 19 O -0.54 1.18 12.83 -35.23 -0.45 0.73 16 20 Si 0.69 -2.09 29.79 -169.99 -5.06 -7.15 16 21 C -0.03 0.04 9.17 -39.19 -0.36 -0.32 16 22 C -0.13 0.13 7.47 -25.92 -0.19 -0.06 16 23 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 25 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 26 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.09 0.00 7.90 -51.93 -0.41 -0.41 16 28 H 0.07 0.09 7.84 -51.93 -0.41 -0.31 16 29 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 30 H 0.40 -1.08 6.51 -40.82 -0.27 -1.35 16 31 H 0.15 -0.44 8.06 -52.48 -0.42 -0.86 16 32 H 0.14 -0.70 4.88 -52.49 -0.26 -0.96 16 33 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 34 H 0.38 -2.22 8.70 45.56 0.40 -1.82 16 35 H -0.25 0.17 7.11 56.52 0.40 0.57 16 36 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 37 H 0.14 -0.44 6.41 -52.48 -0.34 -0.78 16 38 H 0.10 -0.01 8.10 -51.93 -0.42 -0.43 16 39 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 LS Contribution 331.46 15.07 4.99 4.99 Total: 0.00 -8.77 331.46 -8.54 -17.31 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -5.10 Total: -11.09 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: -2.31 Total: 0.92 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.34 Total: -0.32 kcal Atomic # 8 Polarization: -3.40 SS G_CDS: -0.75 Total: -4.15 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.04 Total: -0.51 kcal Atomic # 14 Polarization: -2.09 SS G_CDS: -5.06 Total: -7.15 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -8.77 -8.54 -17.31 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.877 kcal (2) G-P(sol) polarization free energy of solvation -8.773 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.650 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.536 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds