Wall clock time and date at job start Sat Mar 6 2021 18:27:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42902 * 113.99903 * 2 1 4 4 H 1.08993 * 112.90736 * 341.24804 * 3 2 1 5 5 C 1.53962 * 113.66723 * 112.55150 * 3 2 1 6 6 C 1.53782 * 87.11063 * 139.88843 * 5 3 2 7 7 H 1.08997 * 113.61225 * 89.18406 * 6 5 3 8 8 C 1.52998 * 113.68747 * 220.07804 * 6 5 3 9 9 N 1.46499 * 109.46882 * 272.53320 * 8 6 5 10 10 C 1.34783 * 119.99918 * 180.02562 * 9 8 6 11 11 O 1.21597 * 119.99943 * 0.02562 * 10 9 8 12 12 C 1.47576 * 120.00088 * 180.02562 * 10 9 8 13 13 C 1.40202 * 119.83262 * 0.02562 * 12 10 9 14 14 C 1.36227 * 120.37891 * 179.97438 * 13 12 10 15 15 C 1.39874 * 119.95941 * 0.02562 * 14 13 12 16 16 C 1.46262 * 133.84038 * 179.97438 * 15 14 13 17 17 C 1.50698 * 126.48159 * 359.97438 * 16 15 14 18 18 O 1.42895 * 109.47570 * 74.99651 * 17 16 15 19 19 Si 1.86304 * 109.46970 * 194.99885 * 17 16 15 20 20 C 1.34462 * 107.03366 * 180.02562 * 16 15 14 21 21 N 1.36557 * 109.98409 * 0.02562 * 20 16 15 22 22 C 1.37834 * 109.86615 * 359.97438 * 21 20 16 23 23 C 1.38641 * 133.38468 * 180.28391 * 22 21 20 24 24 C 1.53781 * 87.08260 * 334.63747 * 6 5 3 25 25 H 1.08998 * 109.46809 * 299.99633 * 1 2 3 26 26 H 1.08997 * 109.47166 * 60.00208 * 1 2 3 27 27 H 1.09001 * 109.46682 * 179.97438 * 1 2 3 28 28 H 1.08997 * 113.53543 * 25.33518 * 5 3 2 29 29 H 1.08994 * 113.66446 * 254.45720 * 5 3 2 30 30 H 1.08995 * 109.47742 * 32.53801 * 8 6 5 31 31 H 1.09003 * 109.47049 * 152.53819 * 8 6 5 32 32 H 0.96999 * 120.00576 * 0.02562 * 9 8 6 33 33 H 1.08002 * 119.80683 * 0.02562 * 13 12 10 34 34 H 1.07997 * 120.01896 * 180.02562 * 14 13 12 35 35 H 1.09000 * 109.46950 * 314.99253 * 17 16 15 36 36 H 0.96692 * 114.00512 * 180.02562 * 18 17 16 37 37 H 1.48508 * 109.99631 * 299.99676 * 19 17 16 38 38 H 1.48496 * 110.00149 * 61.31300 * 19 17 16 39 39 H 1.07994 * 125.00184 * 179.97438 * 20 16 15 40 40 H 0.97001 * 125.06629 * 180.02562 * 21 20 16 41 41 H 1.08006 * 120.16689 * 359.93916 * 23 22 21 42 42 H 1.09002 * 113.61445 * 139.98212 * 24 6 5 43 43 H 1.09002 * 113.61408 * 270.79943 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3143 2.0797 -0.3227 5 6 2.7556 1.6501 1.3023 6 6 3.8253 2.3175 0.4218 7 1 3.6264 3.3689 0.2145 8 6 5.2575 2.0662 0.8977 9 7 5.6316 3.0863 1.8803 10 6 6.8574 3.0652 2.4403 11 8 7.6530 2.1997 2.1295 12 6 7.2341 4.0925 3.4306 13 6 6.3139 5.0885 3.7867 14 6 6.6497 6.0419 4.7000 15 6 7.9191 6.0303 5.2873 16 6 8.5870 6.8794 6.2733 17 6 8.0030 8.0893 6.9560 18 8 7.0701 7.6695 7.9537 19 14 9.3694 9.0703 7.7571 20 6 9.8209 6.3769 6.4545 21 7 9.9973 5.2767 5.6651 22 6 8.8527 5.0347 4.9364 23 6 8.5009 4.0653 4.0097 24 6 3.3756 1.3719 -0.7045 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 3.1177 0.7747 1.8413 29 1 2.2180 2.3499 1.9420 30 1 5.3202 1.0795 1.3565 31 1 5.9370 2.1150 0.0467 32 1 4.9972 3.7770 2.1280 33 1 5.3329 5.0994 3.3350 34 1 5.9362 6.8062 4.9704 35 1 7.4929 8.7109 6.2201 36 1 6.6538 8.3979 8.4344 37 1 10.0728 8.2339 8.7626 38 1 10.3294 9.5397 6.7260 39 1 10.5633 6.7841 7.1249 40 1 10.8072 4.7444 5.6239 41 1 9.2065 3.2949 3.7356 42 1 3.3385 1.8471 -1.6848 43 1 3.9083 0.4209 -0.7150 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_12335838.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:27:45 Heat of formation + Delta-G solvation = -21.348995 kcal Electronic energy + Delta-G solvation = -25330.357886 eV Core-core repulsion = 21536.679309 eV Total energy + Delta-G solvation = -3793.678577 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.47196 -41.00160 -40.19387 -37.86554 -37.53515 -37.32487 -35.21441 -33.35014 -31.05668 -30.74916 -28.95018 -27.44175 -26.74116 -26.43811 -24.65595 -23.61381 -23.09608 -21.50015 -20.68222 -20.48143 -19.21594 -18.46273 -18.31379 -17.71328 -17.25748 -16.91689 -16.65659 -16.35768 -15.99986 -15.75878 -15.67639 -15.37193 -15.13791 -15.04816 -14.79241 -14.69972 -14.39039 -14.12986 -13.82880 -13.59992 -13.46482 -13.22175 -12.94268 -12.62545 -12.54930 -12.49728 -12.08437 -12.00833 -11.90343 -11.75988 -11.47376 -10.85125 -10.75000 -10.44697 -10.23509 -10.03399 -9.34309 -8.81491 -5.05114 -0.24537 0.40708 1.26634 1.33013 1.62371 1.87457 1.92930 2.05211 2.25569 2.82554 2.95672 3.41885 3.50750 3.52093 3.60053 3.70413 3.73692 3.75272 3.83998 3.99225 4.03972 4.10595 4.22693 4.24226 4.38810 4.39849 4.44677 4.47672 4.57255 4.66673 4.68255 4.73328 4.76035 4.79225 4.84727 4.95288 4.99663 5.09110 5.24048 5.25716 5.43531 5.43965 5.52632 5.60380 5.98751 6.25829 6.35167 6.53576 6.69600 7.28788 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.089 0.911 5 C -0.151 4.151 6 C -0.125 4.125 7 H 0.100 0.900 8 C 0.132 3.868 9 N -0.725 5.725 10 C 0.562 3.438 11 O -0.538 6.538 12 C -0.120 4.120 13 C -0.113 4.113 14 C -0.070 4.070 15 C -0.063 4.063 16 C -0.164 4.164 17 C -0.033 4.033 18 O -0.547 6.547 19 Si 0.684 3.316 20 C 0.071 3.929 21 N -0.583 5.583 22 C 0.082 3.918 23 C -0.056 4.056 24 C -0.127 4.127 25 H 0.042 0.958 26 H 0.042 0.958 27 H 0.086 0.914 28 H 0.093 0.907 29 H 0.071 0.929 30 H 0.073 0.927 31 H 0.072 0.928 32 H 0.401 0.599 33 H 0.127 0.873 34 H 0.131 0.869 35 H 0.071 0.929 36 H 0.379 0.621 37 H -0.254 1.254 38 H -0.256 1.256 39 H 0.170 0.830 40 H 0.422 0.578 41 H 0.137 0.863 42 H 0.077 0.923 43 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.303 6.318 1.368 7.259 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.107 0.893 5 C -0.189 4.189 6 C -0.143 4.143 7 H 0.118 0.882 8 C 0.009 3.991 9 N -0.377 5.377 10 C 0.350 3.650 11 O -0.416 6.416 12 C -0.124 4.124 13 C -0.133 4.133 14 C -0.089 4.089 15 C -0.068 4.068 16 C -0.171 4.171 17 C -0.145 4.145 18 O -0.353 6.353 19 Si 0.585 3.415 20 C -0.057 4.057 21 N -0.185 5.185 22 C -0.024 4.024 23 C -0.077 4.077 24 C -0.165 4.165 25 H 0.060 0.940 26 H 0.061 0.939 27 H 0.105 0.895 28 H 0.112 0.888 29 H 0.090 0.910 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.237 0.763 33 H 0.144 0.856 34 H 0.149 0.851 35 H 0.089 0.911 36 H 0.226 0.774 37 H -0.178 1.178 38 H -0.180 1.180 39 H 0.187 0.813 40 H 0.260 0.740 41 H 0.155 0.845 42 H 0.096 0.904 43 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -1.460 4.907 1.055 5.227 hybrid contribution -0.281 -0.021 -0.223 0.359 sum -1.741 4.886 0.832 5.253 Atomic orbital electron populations 1.22813 0.80952 1.03015 0.99981 1.87963 1.19838 1.27177 1.94544 1.23725 0.93894 0.85512 0.96688 0.89350 1.23661 0.97040 1.01075 0.97107 1.22568 0.93726 1.00094 0.97949 0.88193 1.21351 0.94360 0.91703 0.91688 1.45869 1.15346 1.32258 1.44224 1.18140 0.81668 0.84462 0.80731 1.90801 1.50518 1.37756 1.62566 1.19435 0.94895 0.97758 1.00334 1.20680 0.98880 0.94879 0.98853 1.20168 0.94450 0.98720 0.95538 1.19151 0.94163 0.95366 0.98077 1.19617 0.94103 1.00224 1.03157 1.23933 1.00320 0.96913 0.93307 1.86539 1.59857 1.36845 1.52036 0.95105 0.78970 0.85226 0.82202 1.21646 0.98320 0.89187 0.96570 1.41673 1.14214 1.26011 1.36634 1.18078 0.87646 0.98612 0.98042 1.20075 0.96244 0.96940 0.94468 1.23208 0.95324 1.00246 0.97676 0.93953 0.93926 0.89533 0.88804 0.91010 0.90861 0.90930 0.76331 0.85553 0.85131 0.91113 0.77361 1.17813 1.18045 0.81330 0.73958 0.84534 0.90431 0.88562 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.74 10.72 -35.23 -0.38 -1.12 16 3 C 0.06 -0.02 4.32 -25.82 -0.11 -0.13 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.15 0.15 7.47 -25.82 -0.19 -0.05 16 6 C -0.12 0.21 3.75 -89.81 -0.34 -0.12 16 7 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 8 C 0.13 0.04 5.51 -4.04 -0.02 0.02 16 9 N -0.72 -0.37 5.50 -61.33 -0.34 -0.71 16 10 C 0.56 2.09 7.76 -12.45 -0.10 1.99 16 11 O -0.54 -4.00 16.31 5.28 0.09 -3.91 16 12 C -0.12 -0.33 5.87 -104.95 -0.62 -0.95 16 13 C -0.11 -0.09 9.46 -39.57 -0.37 -0.46 16 14 C -0.07 -0.11 10.03 -39.69 -0.40 -0.51 16 15 C -0.06 -0.20 6.35 -105.04 -0.67 -0.87 16 16 C -0.16 -0.39 5.61 -102.74 -0.58 -0.96 16 17 C -0.03 0.01 3.05 36.00 0.11 0.12 16 18 O -0.55 -0.11 12.86 -35.23 -0.45 -0.56 16 19 Si 0.68 -1.22 30.79 -169.99 -5.23 -6.45 16 20 C 0.07 0.09 10.43 -16.78 -0.18 -0.08 16 21 N -0.58 -0.55 6.07 -10.68 -0.06 -0.62 16 22 C 0.08 0.24 7.26 -84.00 -0.61 -0.37 16 23 C -0.06 -0.18 9.61 -39.03 -0.37 -0.55 16 24 C -0.13 0.11 7.47 -25.92 -0.19 -0.08 16 25 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 26 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.09 0.04 7.90 -51.93 -0.41 -0.37 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 30 H 0.07 0.12 7.85 -51.93 -0.41 -0.29 16 31 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 32 H 0.40 -0.85 6.46 -40.82 -0.26 -1.12 16 33 H 0.13 -0.29 6.36 -52.49 -0.33 -0.63 16 34 H 0.13 -0.03 8.06 -52.49 -0.42 -0.45 16 35 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 36 H 0.38 -1.88 8.74 45.56 0.40 -1.48 16 37 H -0.25 -0.22 7.04 56.52 0.40 0.18 16 38 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 39 H 0.17 -0.12 6.30 -52.49 -0.33 -0.45 16 40 H 0.42 -0.84 8.96 -40.82 -0.37 -1.21 16 41 H 0.14 0.40 7.62 -52.48 -0.40 0.00 16 42 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.10 0.01 8.10 -51.93 -0.42 -0.41 16 LS Contribution 360.38 15.07 5.43 5.43 Total: 0.00 -10.23 360.38 -10.43 -20.66 By element: Atomic # 1 Polarization: -4.84 SS G_CDS: -5.94 Total: -10.78 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -3.54 Total: -1.93 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: -0.40 Total: -1.32 kcal Atomic # 8 Polarization: -4.85 SS G_CDS: -0.74 Total: -5.60 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.23 Total: -6.45 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -10.23 -10.43 -20.66 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_12335838.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.693 kcal (2) G-P(sol) polarization free energy of solvation -10.227 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.920 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.656 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds