Wall clock time and date at job start Sat Mar 6 2021 18:28:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42901 * 113.99905 * 2 1 4 4 H 1.09006 * 112.90937 * 341.24973 * 3 2 1 5 5 C 1.53779 * 113.61593 * 112.50233 * 3 2 1 6 6 C 1.53784 * 87.08045 * 139.98101 * 5 3 2 7 7 H 1.08994 * 113.61477 * 89.11454 * 6 5 3 8 8 C 1.52997 * 113.61270 * 220.02125 * 6 5 3 9 9 N 1.46498 * 109.47070 * 272.49429 * 8 6 5 10 10 C 1.34783 * 120.00214 * 179.97438 * 9 8 6 11 11 O 1.21546 * 119.99742 * 0.02562 * 10 9 8 12 12 C 1.47847 * 120.00123 * 180.02562 * 10 9 8 13 13 C 1.39550 * 120.13939 * 359.97438 * 12 10 9 14 14 C 1.38067 * 119.83910 * 180.02562 * 13 12 10 15 15 Br 1.89101 * 119.93549 * 179.97438 * 14 13 12 16 16 C 1.38423 * 120.12733 * 0.02562 * 14 13 12 17 17 C 1.38367 * 120.28093 * 359.97438 * 16 14 13 18 18 C 1.50699 * 119.91640 * 180.02562 * 17 16 14 19 19 O 1.42896 * 109.46921 * 244.99719 * 18 17 16 20 20 Si 1.86292 * 109.47593 * 4.99923 * 18 17 16 21 21 C 1.37942 * 120.15602 * 359.71903 * 17 16 14 22 22 C 1.53779 * 113.61102 * 210.00216 * 3 2 1 23 23 H 1.08998 * 109.46939 * 300.00108 * 1 2 3 24 24 H 1.08998 * 109.47050 * 59.99797 * 1 2 3 25 25 H 1.09001 * 109.46818 * 180.02562 * 1 2 3 26 26 H 1.09002 * 113.61557 * 25.43213 * 5 3 2 27 27 H 1.09004 * 113.61501 * 254.52634 * 5 3 2 28 28 H 1.08998 * 109.47573 * 32.49481 * 8 6 5 29 29 H 1.09003 * 109.47157 * 152.50001 * 8 6 5 30 30 H 0.96997 * 120.00287 * 0.02562 * 9 8 6 31 31 H 1.07999 * 120.07519 * 0.02562 * 13 12 10 32 32 H 1.08001 * 119.85736 * 179.97438 * 16 14 13 33 33 H 1.09004 * 109.46828 * 125.00325 * 18 17 16 34 34 H 0.96704 * 114.00128 * 180.02562 * 19 18 17 35 35 H 1.48498 * 110.00279 * 178.68085 * 20 18 17 36 36 H 1.48500 * 109.99979 * 300.00026 * 20 18 17 37 37 H 1.07999 * 120.05997 * 180.27909 * 21 17 16 38 38 H 1.08997 * 113.61646 * 105.47095 * 22 3 2 39 39 H 1.08998 * 113.69354 * 334.57403 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3143 2.0798 -0.3228 5 6 2.7535 1.6489 1.3017 6 6 3.8227 2.3182 0.4221 7 1 3.6222 3.3693 0.2148 8 6 5.2543 2.0680 0.9005 9 7 5.6260 3.0887 1.8835 10 6 6.8506 3.0680 2.4463 11 8 7.6465 2.2028 2.1380 12 6 7.2255 4.0978 3.4387 13 6 6.3141 5.0929 3.7944 14 6 6.6710 6.0518 4.7214 15 35 5.4383 7.4019 5.2049 16 6 7.9297 6.0275 5.2968 17 6 8.8375 5.0432 4.9478 18 6 10.2054 5.0241 5.5798 19 8 11.1960 5.2649 4.5785 20 14 10.3056 6.3505 6.8841 21 6 8.4909 4.0757 4.0277 22 6 3.3755 1.3719 -0.7046 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5139 -0.8899 25 1 -0.3633 -1.0277 0.0005 26 1 3.1167 0.7741 1.8410 27 1 2.2141 2.3478 1.9411 28 1 5.3168 1.0815 1.3599 29 1 5.9352 2.1170 0.0507 30 1 4.9907 3.7791 2.1298 31 1 5.3320 5.1128 3.3456 32 1 8.2045 6.7800 6.0212 33 1 10.3806 4.0504 6.0375 34 1 12.1028 5.2663 4.9146 35 1 11.6391 6.3213 7.5369 36 1 10.0685 7.6829 6.2727 37 1 9.1991 3.3055 3.7598 38 1 3.3384 1.8470 -1.6848 39 1 3.9099 0.4219 -0.7147 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:28:05 Heat of formation + Delta-G solvation = -51.227909 kcal Electronic energy + Delta-G solvation = -22747.755545 eV Core-core repulsion = 19090.379129 eV Total energy + Delta-G solvation = -3657.376415 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.046 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.54424 -40.67492 -39.71939 -37.82643 -37.46385 -35.39509 -33.67710 -33.20633 -30.48813 -29.36486 -27.54307 -27.02985 -26.78825 -25.10689 -23.20648 -22.68629 -21.55289 -20.57806 -19.00333 -18.66438 -17.90177 -17.61476 -17.27070 -16.74744 -16.49376 -16.43163 -16.14851 -15.98641 -15.43761 -15.37554 -14.83706 -14.79096 -14.44139 -14.06753 -13.98362 -13.77292 -13.57905 -13.50884 -12.95868 -12.80154 -12.57473 -12.41118 -12.05826 -11.98623 -11.84006 -11.81270 -11.52779 -11.48264 -11.00575 -10.64148 -10.48213 -10.32241 -10.08828 -9.89715 -5.08672 -0.47541 -0.15299 0.40774 1.11515 1.47671 1.61248 1.83517 1.99715 2.50838 2.79044 3.07672 3.31414 3.40838 3.49768 3.52397 3.68679 3.71651 3.77979 3.87972 3.98278 3.99128 4.10320 4.17199 4.29119 4.36826 4.42226 4.44192 4.61053 4.63498 4.72977 4.74557 4.75668 4.78500 4.90174 4.95138 5.04126 5.10696 5.17749 5.33574 5.41691 6.22762 6.31619 6.36327 7.11030 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.089 0.911 5 C -0.152 4.152 6 C -0.126 4.126 7 H 0.100 0.900 8 C 0.132 3.868 9 N -0.724 5.724 10 C 0.561 3.439 11 O -0.527 6.527 12 C -0.127 4.127 13 C -0.054 4.054 14 C -0.094 4.094 15 Br -0.033 7.033 16 C -0.062 4.062 17 C -0.072 4.072 18 C -0.076 4.076 19 O -0.533 6.533 20 Si 0.679 3.321 21 C -0.016 4.016 22 C -0.126 4.126 23 H 0.042 0.958 24 H 0.042 0.958 25 H 0.086 0.914 26 H 0.094 0.906 27 H 0.071 0.929 28 H 0.075 0.925 29 H 0.074 0.926 30 H 0.400 0.600 31 H 0.139 0.861 32 H 0.142 0.858 33 H 0.084 0.916 34 H 0.384 0.616 35 H -0.255 1.255 36 H -0.250 1.250 37 H 0.147 0.853 38 H 0.077 0.923 39 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.659 1.474 2.294 4.563 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.107 0.893 5 C -0.189 4.189 6 C -0.144 4.144 7 H 0.118 0.882 8 C 0.009 3.991 9 N -0.376 5.376 10 C 0.347 3.653 11 O -0.404 6.404 12 C -0.131 4.131 13 C -0.074 4.074 14 C -0.174 4.174 15 Br 0.053 6.947 16 C -0.082 4.082 17 C -0.073 4.073 18 C -0.185 4.185 19 O -0.341 6.341 20 Si 0.579 3.421 21 C -0.036 4.036 22 C -0.164 4.164 23 H 0.060 0.940 24 H 0.061 0.939 25 H 0.105 0.895 26 H 0.113 0.887 27 H 0.090 0.910 28 H 0.094 0.906 29 H 0.092 0.908 30 H 0.236 0.764 31 H 0.156 0.844 32 H 0.160 0.840 33 H 0.102 0.898 34 H 0.232 0.768 35 H -0.179 1.179 36 H -0.175 1.175 37 H 0.165 0.835 38 H 0.096 0.904 39 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -3.577 1.928 2.122 4.584 hybrid contribution 0.718 0.121 -0.574 0.928 sum -2.858 2.049 1.548 3.842 Atomic orbital electron populations 1.22816 0.80927 1.03033 0.99991 1.87965 1.19855 1.27136 1.94547 1.23689 0.93903 0.85566 0.96630 0.89338 1.23641 0.97054 1.01073 0.97149 1.22582 0.93644 1.00156 0.98053 0.88170 1.21391 0.94535 0.91572 0.91611 1.45895 1.15256 1.32318 1.44171 1.18083 0.81875 0.84471 0.80826 1.90823 1.50199 1.37268 1.62125 1.19935 0.95634 0.97249 1.00323 1.21266 0.99250 0.92121 0.94800 1.21587 0.95430 0.97908 1.02431 1.96832 1.57102 1.48790 1.92004 1.21190 0.91810 0.97161 0.98018 1.19203 0.94283 0.95341 0.98464 1.24773 0.87154 1.09006 0.97613 1.86591 1.18367 1.94412 1.34715 0.95111 0.86843 0.78476 0.81675 1.21276 0.94407 0.96734 0.91150 1.23208 0.95340 1.00214 0.97667 0.93958 0.93911 0.89514 0.88747 0.91007 0.90649 0.90758 0.76430 0.84374 0.84037 0.89791 0.76775 1.17946 1.17471 0.83529 0.90395 0.88508 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.57 10.71 -35.23 -0.38 -0.95 16 3 C 0.06 -0.05 4.31 -25.92 -0.11 -0.16 16 4 H 0.09 -0.19 7.87 -51.93 -0.41 -0.60 16 5 C -0.15 0.25 7.46 -25.92 -0.19 0.06 16 6 C -0.13 0.30 3.76 -89.80 -0.34 -0.04 16 7 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 8 C 0.13 -0.07 5.51 -4.04 -0.02 -0.09 16 9 N -0.72 0.40 5.51 -61.25 -0.34 0.06 16 10 C 0.56 1.37 7.77 -12.33 -0.10 1.27 16 11 O -0.53 -3.30 16.35 5.33 0.09 -3.21 16 12 C -0.13 -0.15 5.87 -104.97 -0.62 -0.77 16 13 C -0.05 0.03 9.28 -39.15 -0.36 -0.33 16 14 C -0.09 0.00 6.22 -39.58 -0.25 -0.24 16 15 Br -0.03 0.01 33.69 -68.01 -2.29 -2.28 16 16 C -0.06 0.00 8.40 -39.47 -0.33 -0.34 16 17 C -0.07 -0.05 5.38 -104.68 -0.56 -0.61 16 18 C -0.08 0.05 2.79 36.01 0.10 0.15 16 19 O -0.53 -0.39 12.81 -35.23 -0.45 -0.84 16 20 Si 0.68 -1.04 29.84 -169.99 -5.07 -6.11 16 21 C -0.02 -0.03 9.23 -39.18 -0.36 -0.39 16 22 C -0.13 0.17 7.47 -25.92 -0.19 -0.02 16 23 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 25 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 26 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 27 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 28 H 0.08 0.05 7.84 -51.93 -0.41 -0.36 16 29 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 30 H 0.40 -1.26 6.51 -40.82 -0.27 -1.52 16 31 H 0.14 -0.43 6.40 -52.49 -0.34 -0.77 16 32 H 0.14 -0.18 4.85 -52.49 -0.25 -0.43 16 33 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 34 H 0.38 -1.26 8.74 45.56 0.40 -0.87 16 35 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 36 H -0.25 -0.35 7.04 56.52 0.40 0.05 16 37 H 0.15 0.34 7.65 -52.49 -0.40 -0.06 16 38 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 39 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 LS Contribution 348.18 15.07 5.25 5.25 Total: 0.00 -7.70 348.18 -10.52 -18.22 By element: Atomic # 1 Polarization: -4.61 SS G_CDS: -5.08 Total: -9.69 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -2.24 Total: -0.45 kcal Atomic # 7 Polarization: 0.40 SS G_CDS: -0.34 Total: 0.06 kcal Atomic # 8 Polarization: -4.26 SS G_CDS: -0.74 Total: -5.00 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.07 Total: -6.11 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -7.70 -10.52 -18.22 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.008 kcal (2) G-P(sol) polarization free energy of solvation -7.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.515 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.220 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.228 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds