Wall clock time and date at job start Sat Mar 6 2021 18:28:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42900 * 113.99697 * 2 1 4 4 H 1.08998 * 112.85356 * 18.80918 * 3 2 1 5 5 C 1.53784 * 113.61339 * 150.00561 * 3 2 1 6 6 C 1.53777 * 87.08531 * 139.97868 * 5 3 2 7 7 H 1.09001 * 113.61476 * 89.19355 * 6 5 3 8 8 C 1.52994 * 113.61826 * 220.01757 * 6 5 3 9 9 N 1.46503 * 109.47428 * 183.46993 * 8 6 5 10 10 C 1.34770 * 119.99826 * 180.02562 * 9 8 6 11 11 O 1.21696 * 120.00434 * 359.97438 * 10 9 8 12 12 C 1.46436 * 119.99692 * 180.02562 * 10 9 8 13 13 C 1.34814 * 119.99827 * 179.97438 * 12 10 9 14 14 C 1.47206 * 119.99785 * 179.97438 * 13 12 10 15 15 C 1.39836 * 120.16774 * 0.32289 * 14 13 12 16 16 C 1.37893 * 119.82402 * 180.23013 * 15 14 13 17 17 C 1.38403 * 120.16807 * 359.46824 * 16 15 14 18 18 C 1.50700 * 119.82534 * 180.27866 * 17 16 15 19 19 O 1.42902 * 109.47185 * 65.00304 * 18 17 16 20 20 Si 1.86305 * 109.47237 * 185.00044 * 18 17 16 21 21 C 1.38404 * 120.34900 * 0.25594 * 17 16 15 22 22 C 1.37896 * 120.16550 * 0.02562 * 21 17 16 23 23 C 1.53783 * 87.17039 * 334.61005 * 6 5 3 24 24 H 1.09001 * 109.47385 * 59.99811 * 1 2 3 25 25 H 1.08998 * 109.46679 * 180.02562 * 1 2 3 26 26 H 1.09002 * 109.46890 * 299.99355 * 1 2 3 27 27 H 1.09002 * 113.61553 * 25.42944 * 5 3 2 28 28 H 1.09001 * 113.61057 * 254.53062 * 5 3 2 29 29 H 1.09003 * 109.46910 * 63.46956 * 8 6 5 30 30 H 1.09000 * 109.47229 * 303.46890 * 8 6 5 31 31 H 0.96995 * 119.99933 * 359.97438 * 9 8 6 32 32 H 1.07995 * 120.00077 * 359.97438 * 12 10 9 33 33 H 1.07996 * 120.00090 * 0.02562 * 13 12 10 34 34 H 1.08004 * 120.09359 * 359.97438 * 15 14 13 35 35 H 1.08002 * 119.91884 * 179.75241 * 16 15 14 36 36 H 1.08998 * 109.47440 * 304.99825 * 18 17 16 37 37 H 0.96704 * 113.99978 * 59.99649 * 19 18 17 38 38 H 1.48495 * 110.00271 * 180.02562 * 20 18 17 39 39 H 1.48505 * 109.99857 * 301.32275 * 20 18 17 40 40 H 1.08001 * 119.91754 * 180.02562 * 21 17 16 41 41 H 1.08002 * 120.08152 * 180.02562 * 22 21 17 42 42 H 1.09003 * 113.61238 * 139.94146 * 23 6 5 43 43 H 1.09004 * 113.61170 * 270.83922 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 0.3238 5 6 3.3756 1.3719 0.7044 6 6 3.8227 2.3182 -0.4223 7 1 3.6235 3.3695 -0.2144 8 6 5.2542 2.0681 -0.9008 9 7 5.6131 3.0670 -1.9106 10 6 6.8353 3.0423 -2.4781 11 8 7.6409 2.1907 -2.1515 12 6 7.1942 4.0411 -3.4871 13 6 8.4169 4.0168 -4.0544 14 6 8.7775 5.0205 -5.0691 15 6 7.8570 6.0048 -5.4421 16 6 8.2006 6.9386 -6.3968 17 6 9.4566 6.9100 -6.9773 18 6 9.8262 7.9382 -8.0153 19 8 9.8502 9.2345 -7.4143 20 14 11.5099 7.5437 -8.7083 21 6 10.3753 5.9425 -6.6092 22 6 10.0445 4.9983 -5.6602 23 6 2.7532 1.6512 -1.3033 24 1 -0.3634 0.5139 -0.8900 25 1 -0.3632 -1.0277 0.0005 26 1 -0.3633 0.5137 0.8901 27 1 3.9089 0.4213 0.7136 28 1 3.3384 1.8471 1.6847 29 1 5.3229 1.0709 -1.3356 30 1 5.9383 2.1439 -0.0556 31 1 4.9710 3.7456 -2.1712 32 1 6.4795 4.7972 -3.7766 33 1 9.1315 3.2605 -3.7652 34 1 6.8780 6.0311 -4.9868 35 1 7.4893 7.6970 -6.6890 36 1 9.0901 7.9239 -8.8191 37 1 10.4844 9.3202 -6.6893 38 1 11.8863 8.5507 -9.7327 39 1 12.5174 7.5286 -7.6173 40 1 11.3536 5.9269 -7.0664 41 1 10.7626 4.2441 -5.3737 42 1 2.2145 2.3515 -1.9416 43 1 3.1161 0.7770 -1.8441 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:28:11 Heat of formation + Delta-G solvation = -44.205499 kcal Electronic energy + Delta-G solvation = -23031.146489 eV Core-core repulsion = 19430.128832 eV Total energy + Delta-G solvation = -3601.017657 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.151 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.06019 -40.69133 -40.08205 -37.94347 -37.45697 -35.25539 -35.04137 -32.17633 -31.55971 -29.38781 -27.62446 -26.94781 -26.68475 -24.29322 -23.99650 -23.06138 -21.96661 -20.99414 -20.20671 -18.66756 -18.50314 -17.85243 -17.04958 -16.93673 -16.67281 -16.37726 -16.33885 -16.27945 -15.99533 -15.84105 -15.39475 -15.06180 -14.77534 -14.48015 -14.18347 -14.02664 -13.83734 -13.64664 -13.50706 -13.49276 -12.96229 -12.93172 -12.54862 -12.27966 -12.12948 -12.02823 -11.79658 -11.65161 -11.50747 -11.34965 -10.88099 -10.65517 -10.47568 -10.06730 -10.05798 -9.29897 -5.00740 -0.57827 0.31155 0.89405 1.22515 1.54264 1.91628 2.18180 2.31236 2.75858 2.80096 3.29790 3.38701 3.46582 3.54500 3.64780 3.69024 3.71558 3.73898 3.85537 4.00421 4.09769 4.15416 4.20588 4.24782 4.37236 4.40317 4.42298 4.47492 4.63413 4.65095 4.73466 4.76053 4.80317 4.81565 4.86934 4.91822 5.02532 5.06274 5.09475 5.21936 5.32550 5.38903 5.46290 5.56372 5.81393 6.23214 6.32895 6.51969 7.27305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.088 0.912 5 C -0.127 4.127 6 C -0.125 4.125 7 H 0.099 0.901 8 C 0.132 3.868 9 N -0.725 5.725 10 C 0.546 3.454 11 O -0.543 6.543 12 C -0.213 4.213 13 C -0.017 4.017 14 C -0.072 4.072 15 C -0.100 4.100 16 C -0.094 4.094 17 C -0.106 4.106 18 C -0.077 4.077 19 O -0.529 6.529 20 Si 0.686 3.314 21 C -0.120 4.120 22 C -0.088 4.088 23 C -0.151 4.151 24 H 0.042 0.958 25 H 0.086 0.914 26 H 0.042 0.958 27 H 0.096 0.904 28 H 0.077 0.923 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.402 0.598 32 H 0.130 0.870 33 H 0.138 0.862 34 H 0.130 0.870 35 H 0.129 0.871 36 H 0.120 0.880 37 H 0.376 0.624 38 H -0.256 1.256 39 H -0.260 1.260 40 H 0.131 0.869 41 H 0.134 0.866 42 H 0.071 0.929 43 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.290 1.263 -0.842 3.623 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.106 0.894 5 C -0.165 4.165 6 C -0.143 4.143 7 H 0.118 0.882 8 C 0.008 3.992 9 N -0.377 5.377 10 C 0.335 3.665 11 O -0.422 6.422 12 C -0.234 4.234 13 C -0.037 4.037 14 C -0.072 4.072 15 C -0.118 4.118 16 C -0.112 4.112 17 C -0.107 4.107 18 C -0.187 4.187 19 O -0.335 6.335 20 Si 0.588 3.412 21 C -0.138 4.138 22 C -0.106 4.106 23 C -0.189 4.189 24 H 0.060 0.940 25 H 0.105 0.895 26 H 0.061 0.939 27 H 0.115 0.885 28 H 0.096 0.904 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.236 0.764 32 H 0.147 0.853 33 H 0.156 0.844 34 H 0.147 0.853 35 H 0.147 0.853 36 H 0.137 0.863 37 H 0.224 0.776 38 H -0.181 1.181 39 H -0.185 1.185 40 H 0.148 0.852 41 H 0.152 0.848 42 H 0.089 0.911 43 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -2.259 0.858 -1.148 2.675 hybrid contribution -0.705 1.343 0.869 1.748 sum -2.964 2.201 -0.279 3.703 Atomic orbital electron populations 1.22816 0.80937 1.03033 0.99978 1.87963 1.19849 1.27171 1.94544 1.23732 0.93912 0.85523 0.96655 0.89378 1.23208 0.95332 1.00245 0.97690 1.22569 0.93774 1.00063 0.97925 0.88245 1.21333 0.94446 0.92218 0.91170 1.45859 1.15461 1.33808 1.42534 1.18335 0.81701 0.84819 0.81629 1.90842 1.49727 1.38395 1.63284 1.22902 0.98821 1.01206 1.00441 1.22412 0.95964 0.94631 0.90658 1.19077 0.94616 0.96044 0.97450 1.21468 0.99267 0.94134 0.96946 1.20977 0.95981 0.98318 0.95956 1.20457 0.94786 0.96913 0.98499 1.25070 1.13121 0.83305 0.97218 1.86613 1.63885 1.29822 1.53200 0.94919 0.74687 0.89261 0.82356 1.21029 0.99275 0.95382 0.98094 1.21356 0.95513 0.98307 0.95436 1.23654 0.97064 1.01047 0.97098 0.93964 0.89509 0.93921 0.88543 0.90417 0.90934 0.91025 0.76429 0.85255 0.84401 0.85256 0.85266 0.86252 0.77586 1.18148 1.18482 0.85159 0.84847 0.91057 0.88812 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.65 10.72 -35.23 -0.38 -1.03 16 3 C 0.06 -0.04 4.31 -25.83 -0.11 -0.15 16 4 H 0.09 -0.17 7.87 -51.93 -0.41 -0.58 16 5 C -0.13 0.14 7.47 -25.92 -0.19 -0.05 16 6 C -0.12 0.26 3.75 -89.81 -0.34 -0.08 16 7 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 8 C 0.13 -0.03 5.50 -4.04 -0.02 -0.05 16 9 N -0.73 0.38 5.55 -61.70 -0.34 0.03 16 10 C 0.55 1.21 7.74 -12.96 -0.10 1.11 16 11 O -0.54 -3.48 16.23 5.19 0.08 -3.40 16 12 C -0.21 0.02 9.41 -37.50 -0.35 -0.33 16 13 C -0.02 -0.01 9.46 -37.15 -0.35 -0.36 16 14 C -0.07 0.00 5.87 -105.06 -0.62 -0.61 16 15 C -0.10 0.06 9.41 -39.11 -0.37 -0.30 16 16 C -0.09 0.03 9.66 -39.65 -0.38 -0.35 16 17 C -0.11 0.05 5.36 -104.50 -0.56 -0.51 16 18 C -0.08 0.06 2.80 36.01 0.10 0.16 16 19 O -0.53 -0.41 12.83 -35.23 -0.45 -0.86 16 20 Si 0.69 -0.91 29.87 -169.99 -5.08 -5.98 16 21 C -0.12 0.10 8.65 -39.65 -0.34 -0.24 16 22 C -0.09 0.05 9.80 -39.11 -0.38 -0.33 16 23 C -0.15 0.21 7.48 -25.83 -0.19 0.01 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 25 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.10 -0.02 8.10 -51.93 -0.42 -0.44 16 28 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 29 H 0.07 0.09 7.87 -51.93 -0.41 -0.32 16 30 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 31 H 0.40 -1.34 8.45 -40.82 -0.35 -1.69 16 32 H 0.13 -0.36 6.07 -52.49 -0.32 -0.68 16 33 H 0.14 0.13 7.52 -52.49 -0.39 -0.26 16 34 H 0.13 -0.33 6.17 -52.48 -0.32 -0.66 16 35 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 36 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 37 H 0.38 -0.73 8.70 45.56 0.40 -0.33 16 38 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 39 H -0.26 -0.15 7.00 56.52 0.40 0.25 16 40 H 0.13 -0.31 4.81 -52.49 -0.25 -0.56 16 41 H 0.13 -0.29 8.06 -52.49 -0.42 -0.72 16 42 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 43 H 0.09 0.00 7.92 -51.93 -0.41 -0.42 16 LS Contribution 361.38 15.07 5.45 5.45 Total: 0.00 -8.14 361.38 -10.15 -18.29 By element: Atomic # 1 Polarization: -5.18 SS G_CDS: -6.31 Total: -11.49 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -3.12 Total: -1.01 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.34 Total: 0.03 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: -0.75 Total: -5.29 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.08 Total: -5.98 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -8.14 -10.15 -18.29 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.914 kcal (2) G-P(sol) polarization free energy of solvation -8.144 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.148 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.292 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.205 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds