Wall clock time and date at job start Sat Mar 6 2021 18:28:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42904 * 113.99672 * 2 1 4 4 H 1.08993 * 112.84923 * 341.19287 * 3 2 1 5 5 C 1.53958 * 113.66776 * 112.43885 * 3 2 1 6 6 C 1.53779 * 87.01917 * 139.92795 * 5 3 2 7 7 H 1.09001 * 113.61340 * 89.22944 * 6 5 3 8 8 C 1.52998 * 113.61695 * 220.04462 * 6 5 3 9 9 N 1.46496 * 109.47451 * 274.14124 * 8 6 5 10 10 C 1.34778 * 119.99999 * 179.97438 * 9 8 6 11 11 O 1.21567 * 119.99911 * 0.02562 * 10 9 8 12 12 C 1.47667 * 119.99765 * 179.97438 * 10 9 8 13 13 C 1.40003 * 120.45444 * 353.97661 * 12 10 9 14 14 N 1.31310 * 121.37569 * 180.02562 * 13 12 10 15 15 C 1.32820 * 121.88952 * 0.02562 * 14 13 12 16 16 N 1.37155 * 132.96137 * 179.97438 * 15 14 13 17 17 C 1.36941 * 110.11428 * 180.02562 * 16 15 14 18 18 C 1.34179 * 109.95044 * 0.02562 * 17 16 15 19 19 C 1.50705 * 126.59765 * 179.97438 * 18 17 16 20 20 O 1.42906 * 109.46837 * 105.02359 * 19 18 17 21 21 Si 1.86298 * 109.47205 * 345.02599 * 19 18 17 22 22 C 1.41020 * 120.08608 * 0.25776 * 15 14 13 23 23 C 1.39288 * 119.61442 * 359.48113 * 22 15 14 24 24 C 1.50697 * 121.02858 * 180.25497 * 23 22 15 25 25 C 1.53778 * 113.61069 * 209.99598 * 3 2 1 26 26 H 1.08994 * 109.47173 * 300.00152 * 1 2 3 27 27 H 1.08999 * 109.46652 * 60.00408 * 1 2 3 28 28 H 1.08996 * 109.46618 * 180.02562 * 1 2 3 29 29 H 1.08997 * 113.61212 * 25.40981 * 5 3 2 30 30 H 1.08998 * 113.66247 * 254.46217 * 5 3 2 31 31 H 1.08996 * 109.47070 * 154.13576 * 8 6 5 32 32 H 1.09007 * 109.46749 * 34.14244 * 8 6 5 33 33 H 0.97004 * 119.99697 * 359.97438 * 9 8 6 34 34 H 1.08002 * 119.31496 * 0.04678 * 13 12 10 35 35 H 0.97004 * 124.94066 * 0.02562 * 16 15 14 36 36 H 1.07995 * 125.02659 * 180.02562 * 17 16 15 37 37 H 1.08999 * 109.47166 * 225.02325 * 19 18 17 38 38 H 0.96695 * 113.99967 * 299.99559 * 20 19 18 39 39 H 1.48503 * 109.99968 * 179.97438 * 21 19 18 40 40 H 1.48500 * 109.99981 * 301.31952 * 21 19 18 41 41 H 1.08997 * 109.47044 * 263.96585 * 24 23 22 42 42 H 1.08995 * 109.47214 * 23.96326 * 24 23 22 43 43 H 1.09003 * 109.46882 * 143.96975 * 24 23 22 44 44 H 1.09002 * 113.61246 * 105.47079 * 25 3 2 45 45 H 1.08996 * 113.61863 * 334.57240 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0788 -0.3238 5 6 2.7532 1.6513 1.3033 6 6 3.8227 2.3182 0.4222 7 1 3.6235 3.3695 0.2143 8 6 5.2542 2.0682 0.9007 9 7 5.6131 3.0670 1.9105 10 6 6.8353 3.0425 2.4781 11 8 7.6400 2.1917 2.1517 12 6 7.1973 4.0497 3.4955 13 6 6.3281 5.1078 3.7871 14 7 6.6319 6.0136 4.6878 15 6 7.7736 5.9741 5.3655 16 7 8.3139 6.7806 6.3344 17 6 9.5382 6.3013 6.7172 18 6 9.8316 5.1899 6.0251 19 6 11.0831 4.3592 6.1476 20 8 10.7884 3.1562 6.8603 21 14 12.3818 5.3253 7.0700 22 6 8.7037 4.9420 5.1238 23 6 8.4128 3.9605 4.1793 24 6 9.3811 2.8401 3.8998 25 6 3.3755 1.3719 -0.7044 26 1 -0.3633 0.5138 0.8899 27 1 -0.3632 0.5138 -0.8900 28 1 -0.3632 -1.0277 0.0005 29 1 3.1161 0.7772 1.8441 30 1 2.2144 2.3515 1.9416 31 1 5.9382 2.1439 0.0555 32 1 5.3230 1.0710 1.3356 33 1 4.9711 3.7461 2.1706 34 1 5.3880 5.1804 3.2604 35 1 7.8903 7.5749 6.6958 36 1 10.1737 6.7513 7.4655 37 1 11.4532 4.1108 5.1529 38 1 10.4537 3.3015 7.7558 39 1 13.6209 4.5167 7.1981 40 1 12.6741 6.5939 6.3557 41 1 9.9917 3.0953 3.0338 42 1 10.0245 2.6912 4.7668 43 1 8.8272 1.9235 3.6964 44 1 3.3384 1.8471 -1.6847 45 1 3.9088 0.4214 -0.7137 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:28:32 Heat of formation + Delta-G solvation = -9.454255 kcal Electronic energy + Delta-G solvation = -28060.069710 eV Core-core repulsion = 24045.943399 eV Total energy + Delta-G solvation = -4014.126312 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.157 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.82455 -41.05840 -40.29729 -38.68504 -37.77889 -37.41633 -35.48860 -34.71708 -31.95923 -31.35875 -29.21739 -28.51727 -27.41904 -26.75078 -26.39543 -24.63314 -24.00186 -23.06388 -21.78592 -20.78769 -20.51710 -19.23467 -18.81777 -17.91673 -17.53901 -17.37587 -16.93244 -16.75350 -16.59060 -16.31385 -16.24171 -15.92404 -15.65734 -15.47802 -15.34021 -14.81007 -14.61197 -14.30977 -14.04764 -13.80808 -13.70824 -13.55851 -13.47540 -13.46463 -13.17581 -12.95319 -12.89199 -12.50796 -12.26518 -12.05631 -11.97297 -11.76094 -11.46609 -11.03997 -10.99474 -10.46032 -10.44543 -10.16557 -10.03415 -9.56158 -9.12035 -5.12572 -0.20169 -0.03637 1.24457 1.39118 1.57698 1.65671 1.95480 1.97827 2.14019 2.82327 2.88664 3.29141 3.42383 3.45841 3.50952 3.54587 3.62301 3.72814 3.75152 3.77019 3.86083 4.03797 4.10922 4.21993 4.26926 4.30029 4.39596 4.44479 4.52740 4.66464 4.68120 4.68587 4.75786 4.77866 4.79401 4.85324 4.95060 4.98509 5.07498 5.10063 5.21125 5.24802 5.41802 5.47590 5.61559 5.80374 6.11148 6.25704 6.51623 6.61659 6.87109 7.29584 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.088 0.912 5 C -0.151 4.151 6 C -0.125 4.125 7 H 0.100 0.900 8 C 0.134 3.866 9 N -0.727 5.727 10 C 0.570 3.430 11 O -0.529 6.529 12 C -0.233 4.233 13 C 0.180 3.820 14 N -0.504 5.504 15 C 0.307 3.693 16 N -0.570 5.570 17 C 0.070 3.930 18 C -0.181 4.181 19 C -0.036 4.036 20 O -0.538 6.538 21 Si 0.687 3.313 22 C -0.150 4.150 23 C 0.085 3.915 24 C -0.134 4.134 25 C -0.126 4.126 26 H 0.042 0.958 27 H 0.042 0.958 28 H 0.086 0.914 29 H 0.094 0.906 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.073 0.927 33 H 0.399 0.601 34 H 0.162 0.838 35 H 0.425 0.575 36 H 0.186 0.814 37 H 0.116 0.884 38 H 0.378 0.622 39 H -0.253 1.253 40 H -0.255 1.255 41 H 0.080 0.920 42 H 0.084 0.916 43 H 0.099 0.901 44 H 0.077 0.923 45 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.034 4.406 3.359 6.317 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.106 0.894 5 C -0.189 4.189 6 C -0.144 4.144 7 H 0.118 0.882 8 C 0.010 3.990 9 N -0.380 5.380 10 C 0.358 3.642 11 O -0.407 6.407 12 C -0.240 4.240 13 C 0.011 3.989 14 N -0.217 5.217 15 C 0.074 3.926 16 N -0.176 5.176 17 C -0.057 4.057 18 C -0.189 4.189 19 C -0.148 4.148 20 O -0.343 6.343 21 Si 0.588 3.412 22 C -0.156 4.156 23 C 0.076 3.924 24 C -0.189 4.189 25 C -0.164 4.164 26 H 0.060 0.940 27 H 0.061 0.939 28 H 0.105 0.895 29 H 0.112 0.888 30 H 0.090 0.910 31 H 0.091 0.909 32 H 0.092 0.908 33 H 0.234 0.766 34 H 0.179 0.821 35 H 0.264 0.736 36 H 0.203 0.797 37 H 0.133 0.867 38 H 0.225 0.775 39 H -0.177 1.177 40 H -0.180 1.180 41 H 0.098 0.902 42 H 0.102 0.898 43 H 0.117 0.883 44 H 0.096 0.904 45 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -1.886 4.517 2.831 5.655 hybrid contribution -0.699 0.383 -0.460 0.920 sum -2.585 4.900 2.371 6.026 Atomic orbital electron populations 1.22811 0.80965 1.03009 0.99971 1.87964 1.19823 1.27193 1.94547 1.23734 0.93913 0.85502 0.96682 0.89390 1.23656 0.97065 1.01078 0.97092 1.22576 0.93782 1.00098 0.97920 0.88202 1.21335 0.94443 0.92122 0.91058 1.45873 1.15327 1.33987 1.42798 1.17863 0.81657 0.83901 0.80791 1.90764 1.49429 1.38188 1.62307 1.20446 0.98235 1.00880 1.04461 1.22498 0.97503 0.87624 0.91241 1.66434 1.17435 1.28587 1.09283 1.18494 0.91256 0.90845 0.92018 1.41507 1.16774 1.25665 1.33632 1.21721 0.86927 0.96068 1.00938 1.20678 0.97938 0.99061 1.01179 1.24467 0.98842 0.90247 1.01197 1.86517 1.87690 1.28960 1.31147 0.95309 0.79023 0.78916 0.87990 1.19485 0.96878 0.97759 1.01528 1.19927 0.92164 0.92305 0.87970 1.21272 0.98177 0.96814 1.02684 1.23202 0.95318 1.00236 0.97670 0.93974 0.93929 0.89536 0.88786 0.91027 0.90923 0.90839 0.76640 0.82129 0.73596 0.79720 0.86718 0.77469 1.17686 1.17976 0.90185 0.89760 0.88294 0.90433 0.88542 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.69 10.72 -35.23 -0.38 -1.07 16 3 C 0.06 -0.03 4.31 -25.83 -0.11 -0.14 16 4 H 0.09 -0.16 7.87 -51.93 -0.41 -0.57 16 5 C -0.15 0.19 7.48 -25.83 -0.19 0.00 16 6 C -0.13 0.26 3.75 -89.81 -0.34 -0.08 16 7 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 8 C 0.13 -0.03 5.50 -4.04 -0.02 -0.05 16 9 N -0.73 0.13 5.51 -61.31 -0.34 -0.21 16 10 C 0.57 1.71 7.72 -12.41 -0.10 1.62 16 11 O -0.53 -3.25 13.50 5.31 0.07 -3.18 16 12 C -0.23 -0.62 5.89 -104.82 -0.62 -1.24 16 13 C 0.18 0.22 10.67 -17.11 -0.18 0.04 16 14 N -0.50 -1.36 10.37 -11.96 -0.12 -1.48 16 15 C 0.31 0.72 8.42 -155.71 -1.31 -0.59 16 16 N -0.57 0.58 6.04 -12.12 -0.07 0.51 16 17 C 0.07 -0.16 10.44 -16.70 -0.17 -0.33 16 18 C -0.18 -0.03 5.57 -102.73 -0.57 -0.60 16 19 C -0.04 0.02 1.88 36.01 0.07 0.08 16 20 O -0.54 0.04 11.66 -35.23 -0.41 -0.37 16 21 Si 0.69 -1.48 30.76 -169.99 -5.23 -6.71 16 22 C -0.15 -0.41 6.16 -105.13 -0.65 -1.06 16 23 C 0.08 0.30 5.98 -103.67 -0.62 -0.32 16 24 C -0.13 -0.48 8.46 36.00 0.30 -0.17 16 25 C -0.13 0.14 7.47 -25.92 -0.19 -0.06 16 26 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.09 0.01 7.92 -51.93 -0.41 -0.41 16 30 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.07 0.08 7.88 -51.93 -0.41 -0.33 16 33 H 0.40 -1.12 6.55 -40.82 -0.27 -1.39 16 34 H 0.16 -0.39 6.43 -52.49 -0.34 -0.73 16 35 H 0.43 -1.54 8.96 -40.82 -0.37 -1.91 16 36 H 0.19 -1.17 6.35 -52.49 -0.33 -1.50 16 37 H 0.12 0.08 7.13 -51.93 -0.37 -0.29 16 38 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 39 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 40 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 41 H 0.08 0.29 8.14 -51.93 -0.42 -0.14 16 42 H 0.08 0.27 4.79 -51.93 -0.25 0.02 16 43 H 0.10 0.49 5.96 -51.93 -0.31 0.18 16 44 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 45 H 0.10 -0.02 8.10 -51.93 -0.42 -0.44 16 LS Contribution 365.07 15.07 5.50 5.50 Total: 0.00 -10.24 365.07 -10.65 -20.89 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -6.07 Total: -12.05 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -3.61 Total: -1.84 kcal Atomic # 7 Polarization: -0.65 SS G_CDS: -0.53 Total: -1.19 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -0.72 Total: -4.61 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.23 Total: -6.71 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -10.24 -10.65 -20.89 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.440 kcal (2) G-P(sol) polarization free energy of solvation -10.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.200 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.894 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.454 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds