Wall clock time and date at job start Sat Mar 6 2021 18:28:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42907 * 113.99829 * 2 1 4 4 H 1.08996 * 112.85098 * 18.80150 * 3 2 1 5 5 C 1.53781 * 113.61242 * 149.99696 * 3 2 1 6 6 C 1.53780 * 87.08109 * 139.98012 * 5 3 2 7 7 H 1.09003 * 113.61563 * 89.19771 * 6 5 3 8 8 C 1.53003 * 113.61490 * 220.02270 * 6 5 3 9 9 N 1.46498 * 109.46817 * 185.00007 * 8 6 5 10 10 C 1.34781 * 119.99960 * 179.97438 * 9 8 6 11 11 O 1.21644 * 119.99522 * 359.97438 * 10 9 8 12 12 C 1.47056 * 119.99980 * 179.97438 * 10 9 8 13 13 C 1.35865 * 125.42545 * 180.02562 * 12 10 9 14 14 C 1.41589 * 107.73125 * 179.97438 * 13 12 10 15 15 C 1.40061 * 133.38068 * 180.02562 * 14 13 12 16 16 C 1.36476 * 119.83075 * 179.97438 * 15 14 13 17 17 C 1.38901 * 120.61048 * 0.02562 * 16 15 14 18 18 C 1.50704 * 119.67106 * 179.97438 * 17 16 15 19 19 O 1.42907 * 109.46756 * 119.97932 * 18 17 16 20 20 Si 1.86296 * 109.47318 * 359.97438 * 18 17 16 21 21 C 1.37708 * 120.65463 * 359.97438 * 17 16 15 22 22 C 1.39195 * 119.80383 * 0.02562 * 21 17 16 23 23 N 1.37490 * 133.18317 * 180.02562 * 22 21 17 24 24 C 1.53778 * 113.61142 * 247.49167 * 3 2 1 25 25 H 1.09001 * 109.46811 * 60.00415 * 1 2 3 26 26 H 1.09000 * 109.46930 * 180.02562 * 1 2 3 27 27 H 1.08997 * 109.46967 * 300.00408 * 1 2 3 28 28 H 1.09001 * 113.61175 * 25.43166 * 5 3 2 29 29 H 1.08997 * 113.61387 * 254.52910 * 5 3 2 30 30 H 1.08989 * 109.47477 * 64.99722 * 8 6 5 31 31 H 1.09000 * 109.46525 * 304.99440 * 8 6 5 32 32 H 0.96999 * 120.00418 * 359.97438 * 9 8 6 33 33 H 1.08004 * 126.13592 * 359.71694 * 13 12 10 34 34 H 1.07997 * 120.08845 * 359.97438 * 15 14 13 35 35 H 1.07990 * 119.69569 * 180.02562 * 16 15 14 36 36 H 1.09003 * 109.47063 * 239.97629 * 18 17 16 37 37 H 0.96703 * 113.99761 * 300.00037 * 19 18 17 38 38 H 1.48498 * 109.99971 * 179.97438 * 20 18 17 39 39 H 1.48501 * 110.00143 * 301.31773 * 20 18 17 40 40 H 1.07994 * 120.10095 * 180.02562 * 21 17 16 41 41 H 0.96999 * 125.60701 * 359.93686 * 23 22 21 42 42 H 1.09005 * 113.61407 * 105.47055 * 24 3 2 43 43 H 1.08996 * 113.61474 * 334.57135 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0789 0.3237 5 6 3.3755 1.3720 0.7046 6 6 3.8228 2.3182 -0.4221 7 1 3.6236 3.3695 -0.2143 8 6 5.2544 2.0679 -0.9006 9 7 5.6261 3.0886 -1.8835 10 6 6.8509 3.0685 -2.4456 11 8 7.6478 2.2030 -2.1363 12 6 7.2239 4.0927 -3.4327 13 6 8.4231 4.1766 -4.0658 14 6 8.3765 5.2964 -4.9311 15 6 9.2987 5.8655 -5.8184 16 6 8.9552 6.9746 -6.5356 17 6 7.6975 7.5469 -6.3941 18 6 7.3408 8.7719 -7.1962 19 8 6.2115 8.4868 -8.0242 20 14 8.7876 9.2577 -8.2645 21 6 6.7734 7.0060 -5.5283 22 6 7.1002 5.8749 -4.7857 23 7 6.4108 5.1229 -3.8640 24 6 2.7535 1.6488 -1.3017 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5139 0.8899 28 1 3.9088 0.4213 0.7139 29 1 3.3383 1.8472 1.6848 30 1 5.3168 1.0815 -1.3598 31 1 5.9351 2.1169 -0.0507 32 1 4.9908 3.7789 -2.1299 33 1 9.2630 3.5113 -3.9299 34 1 10.2791 5.4278 -5.9348 35 1 9.6678 7.4114 -7.2194 36 1 7.0976 9.5911 -6.5195 37 1 6.3566 7.7664 -8.6528 38 1 8.4482 10.4642 -9.0610 39 1 9.9773 9.5260 -7.4172 40 1 5.7980 7.4580 -5.4256 41 1 5.5028 5.2885 -3.5656 42 1 2.2142 2.3476 -1.9412 43 1 3.1167 0.7740 -1.8409 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_13158378.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:28:39 Heat of formation + Delta-G solvation = -23.272343 kcal Electronic energy + Delta-G solvation = -25218.445698 eV Core-core repulsion = 21424.683719 eV Total energy + Delta-G solvation = -3793.761979 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.69389 -41.01069 -40.17326 -38.95604 -37.52961 -36.90974 -35.42483 -33.28145 -31.36542 -30.41104 -29.45069 -27.64968 -26.91077 -26.55632 -24.48720 -23.42006 -22.92556 -21.98903 -21.40296 -20.67434 -19.55689 -18.44345 -17.93347 -17.79587 -16.96677 -16.89083 -16.74080 -16.54550 -16.23406 -16.09173 -15.70818 -15.56645 -15.40384 -15.07830 -14.82106 -14.60081 -14.45180 -14.18322 -14.06992 -13.71181 -13.57268 -13.14148 -13.02703 -12.64787 -12.59876 -12.53235 -12.12217 -11.97778 -11.88506 -11.65785 -11.59798 -11.22140 -10.94275 -10.53583 -10.47154 -10.27653 -9.32739 -8.83119 -5.01848 -0.34261 0.51159 1.00610 1.28497 1.64763 1.74947 1.91356 1.99213 2.27049 2.73804 2.77182 3.29141 3.38301 3.41700 3.58316 3.62506 3.62995 3.67871 3.69669 3.92622 4.00216 4.09677 4.23616 4.28503 4.32156 4.38084 4.42087 4.46347 4.53434 4.55656 4.60090 4.67271 4.70382 4.72776 4.83727 4.89016 4.95545 4.96965 5.08652 5.22785 5.33803 5.39305 5.51557 5.60633 5.95586 6.17368 6.18045 6.33386 6.54383 6.98975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.060 3.940 4 H 0.089 0.911 5 C -0.126 4.126 6 C -0.126 4.126 7 H 0.099 0.901 8 C 0.132 3.868 9 N -0.728 5.728 10 C 0.584 3.416 11 O -0.516 6.516 12 C 0.014 3.986 13 C -0.100 4.100 14 C -0.117 4.117 15 C -0.050 4.050 16 C -0.146 4.146 17 C -0.088 4.088 18 C -0.068 4.068 19 O -0.541 6.541 20 Si 0.693 3.307 21 C -0.104 4.104 22 C 0.115 3.885 23 N -0.579 5.579 24 C -0.152 4.152 25 H 0.042 0.958 26 H 0.087 0.913 27 H 0.042 0.958 28 H 0.097 0.903 29 H 0.078 0.922 30 H 0.077 0.923 31 H 0.076 0.924 32 H 0.396 0.604 33 H 0.159 0.841 34 H 0.132 0.868 35 H 0.129 0.871 36 H 0.114 0.886 37 H 0.380 0.620 38 H -0.256 1.256 39 H -0.257 1.257 40 H 0.127 0.873 41 H 0.417 0.583 42 H 0.070 0.930 43 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.366 1.038 -0.791 3.610 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.106 0.894 5 C -0.164 4.164 6 C -0.145 4.145 7 H 0.117 0.883 8 C 0.009 3.991 9 N -0.379 5.379 10 C 0.370 3.630 11 O -0.391 6.391 12 C -0.095 4.095 13 C -0.127 4.127 14 C -0.121 4.121 15 C -0.069 4.069 16 C -0.165 4.165 17 C -0.090 4.090 18 C -0.179 4.179 19 O -0.346 6.346 20 Si 0.595 3.405 21 C -0.125 4.125 22 C 0.005 3.995 23 N -0.184 5.184 24 C -0.189 4.189 25 H 0.060 0.940 26 H 0.105 0.895 27 H 0.061 0.939 28 H 0.116 0.884 29 H 0.097 0.903 30 H 0.095 0.905 31 H 0.094 0.906 32 H 0.229 0.771 33 H 0.176 0.824 34 H 0.150 0.850 35 H 0.147 0.853 36 H 0.131 0.869 37 H 0.227 0.773 38 H -0.181 1.181 39 H -0.182 1.182 40 H 0.144 0.856 41 H 0.255 0.745 42 H 0.089 0.911 43 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.491 1.281 -0.289 2.816 hybrid contribution -1.439 0.735 0.678 1.752 sum -3.930 2.016 0.389 4.434 Atomic orbital electron populations 1.22821 0.80877 1.03090 0.99987 1.87968 1.19897 1.27079 1.94539 1.23683 0.93923 0.85616 0.96551 0.89354 1.23210 0.95335 1.00218 0.97639 1.22583 0.93614 1.00115 0.98148 0.88270 1.21413 0.94601 0.91512 0.91557 1.45879 1.15086 1.32400 1.44556 1.17189 0.81949 0.83761 0.80114 1.90890 1.50223 1.36408 1.61618 1.20099 0.93153 0.93346 1.02945 1.20984 0.96771 0.98170 0.96743 1.18225 0.94338 0.98051 1.01503 1.20385 0.98464 0.94502 0.93526 1.20487 0.96165 0.97759 1.02086 1.20034 0.93932 0.97413 0.97635 1.25081 0.98980 0.96999 0.96845 1.86499 1.37366 1.58230 1.52555 0.94537 0.76250 0.85530 0.84191 1.19852 1.00435 0.94833 0.97360 1.18312 0.92369 0.94954 0.93856 1.41890 1.15032 1.24485 1.36944 1.23642 0.97046 1.01075 0.97169 0.93968 0.89453 0.93893 0.88424 0.90339 0.90500 0.90590 0.77050 0.82360 0.84982 0.85340 0.86890 0.77266 1.18135 1.18201 0.85553 0.74533 0.91123 0.88693 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.50 10.71 -35.23 -0.38 -0.87 16 3 C 0.06 -0.07 4.31 -25.92 -0.11 -0.18 16 4 H 0.09 -0.21 7.87 -51.93 -0.41 -0.62 16 5 C -0.13 0.22 7.47 -25.92 -0.19 0.02 16 6 C -0.13 0.35 3.76 -89.80 -0.34 0.01 16 7 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 8 C 0.13 -0.14 5.51 -4.04 -0.02 -0.16 16 9 N -0.73 0.85 5.55 -61.50 -0.34 0.51 16 10 C 0.58 1.21 7.80 -12.68 -0.10 1.12 16 11 O -0.52 -3.04 16.84 5.24 0.09 -2.95 16 12 C 0.01 0.02 6.96 -82.30 -0.57 -0.56 16 13 C -0.10 -0.20 10.53 -39.16 -0.41 -0.61 16 14 C -0.12 -0.19 6.16 -106.94 -0.66 -0.85 16 15 C -0.05 -0.01 10.06 -39.53 -0.40 -0.41 16 16 C -0.15 0.07 8.59 -39.97 -0.34 -0.28 16 17 C -0.09 0.01 5.40 -104.57 -0.56 -0.56 16 18 C -0.07 0.04 2.81 36.01 0.10 0.14 16 19 O -0.54 0.15 12.76 -35.23 -0.45 -0.30 16 20 Si 0.69 -0.92 29.75 -169.99 -5.06 -5.98 16 21 C -0.10 -0.03 9.61 -39.42 -0.38 -0.41 16 22 C 0.12 0.10 7.25 -83.97 -0.61 -0.50 16 23 N -0.58 0.42 6.07 -7.36 -0.04 0.37 16 24 C -0.15 0.30 7.46 -25.92 -0.19 0.10 16 25 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 26 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.10 -0.08 8.10 -51.93 -0.42 -0.50 16 29 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.08 0.01 7.84 -51.94 -0.41 -0.39 16 31 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.40 -1.56 7.53 -40.82 -0.31 -1.87 16 33 H 0.16 0.22 8.06 -52.48 -0.42 -0.21 16 34 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 35 H 0.13 -0.30 4.82 -52.49 -0.25 -0.55 16 36 H 0.11 -0.03 7.96 -51.93 -0.41 -0.45 16 37 H 0.38 -1.51 8.70 45.56 0.40 -1.12 16 38 H -0.26 -0.51 7.11 56.52 0.40 -0.10 16 39 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 40 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 41 H 0.42 -1.59 8.12 -40.82 -0.33 -1.92 16 42 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 43 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 LS Contribution 360.44 15.07 5.43 5.43 Total: 0.00 -8.68 360.44 -10.43 -19.11 By element: Atomic # 1 Polarization: -7.30 SS G_CDS: -5.98 Total: -13.28 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -3.70 Total: -2.04 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: -0.39 Total: 0.88 kcal Atomic # 8 Polarization: -3.39 SS G_CDS: -0.74 Total: -4.13 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.06 Total: -5.98 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -8.68 -10.43 -19.11 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_13158378.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.159 kcal (2) G-P(sol) polarization free energy of solvation -8.685 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.843 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.114 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.272 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds