Wall clock time and date at job start Sat Mar 6 2021 18:28:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42891 * 114.00062 * 2 1 4 4 H 1.09000 * 112.91058 * 18.74736 * 3 2 1 5 5 C 1.53786 * 113.61586 * 149.99622 * 3 2 1 6 6 C 1.53781 * 87.17350 * 140.02292 * 5 3 2 7 7 H 1.08999 * 113.61567 * 89.07405 * 6 5 3 8 8 C 1.52995 * 113.61503 * 219.89414 * 6 5 3 9 9 N 1.46505 * 109.47283 * 185.00012 * 8 6 5 10 10 C 1.34772 * 119.99813 * 180.02562 * 9 8 6 11 11 O 1.21575 * 120.00529 * 359.97438 * 10 9 8 12 12 C 1.47659 * 119.99806 * 179.97438 * 10 9 8 13 13 C 1.40171 * 119.97228 * 359.72387 * 12 10 9 14 14 C 1.36345 * 120.66961 * 179.79331 * 13 12 10 15 15 C 1.39328 * 120.23695 * 0.44086 * 14 13 12 16 16 N 1.37401 * 133.25518 * 179.79126 * 15 14 13 17 17 C 1.36864 * 109.98302 * 180.02562 * 16 15 14 18 18 C 1.34193 * 109.96650 * 359.97438 * 17 16 15 19 19 C 1.50699 * 126.53529 * 180.02562 * 18 17 16 20 20 O 1.42903 * 109.47066 * 254.99619 * 19 18 17 21 21 Si 1.86292 * 109.47432 * 15.00159 * 19 18 17 22 22 C 1.40912 * 119.64064 * 359.81797 * 15 14 13 23 23 C 1.39180 * 119.97501 * 179.97438 * 12 10 9 24 24 C 1.53781 * 87.08070 * 334.52830 * 6 5 3 25 25 H 1.09002 * 109.47245 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.47037 * 300.00188 * 1 2 3 27 27 H 1.09003 * 109.46699 * 60.00030 * 1 2 3 28 28 H 1.09002 * 113.61357 * 25.43209 * 5 3 2 29 29 H 1.09002 * 113.61608 * 254.61371 * 5 3 2 30 30 H 1.09000 * 109.47188 * 305.00387 * 8 6 5 31 31 H 1.09001 * 109.47254 * 65.00150 * 8 6 5 32 32 H 0.97001 * 119.99791 * 0.02562 * 9 8 6 33 33 H 1.08004 * 119.66377 * 359.97438 * 13 12 10 34 34 H 1.08004 * 119.88382 * 180.26116 * 14 13 12 35 35 H 0.97001 * 125.00691 * 0.02562 * 16 15 14 36 36 H 1.08000 * 125.01254 * 180.02562 * 17 16 15 37 37 H 1.09000 * 109.47098 * 135.00341 * 19 18 17 38 38 H 0.96697 * 114.00152 * 180.02562 * 20 19 18 39 39 H 1.48505 * 110.00089 * 299.99832 * 21 19 18 40 40 H 1.48495 * 110.00394 * 61.31892 * 21 19 18 41 41 H 1.08001 * 120.30477 * 359.95435 * 23 12 10 42 42 H 1.09005 * 113.61471 * 139.98321 * 24 6 5 43 43 H 1.08996 * 113.61178 * 270.79663 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3143 2.0797 0.3227 5 6 3.3756 1.3718 0.7046 6 6 3.8247 2.3191 -0.4205 7 1 3.6238 3.3701 -0.2126 8 6 5.2577 2.0707 -0.8953 9 7 5.6310 3.0923 -1.8768 10 6 6.8569 3.0731 -2.4364 11 8 7.6532 2.2084 -2.1263 12 6 7.2329 4.1024 -3.4261 13 6 6.3123 5.0957 -3.7875 14 6 6.6459 6.0555 -4.6967 15 6 7.9082 6.0547 -5.2866 16 7 8.5149 6.8677 -6.2133 17 6 9.7868 6.4270 -6.4607 18 6 10.0465 5.3380 -5.7207 19 6 11.3324 4.5525 -5.7011 20 8 11.1540 3.3287 -6.4170 21 14 12.6830 5.5518 -6.5060 22 6 8.8408 5.0583 -4.9357 23 6 8.4993 4.0824 -4.0032 24 6 2.7569 1.6507 -1.3025 25 1 -0.3634 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 3.9088 0.4212 0.7139 29 1 3.3381 1.8458 1.6855 30 1 5.9363 2.1199 -0.0437 31 1 5.3224 1.0845 -1.3549 32 1 4.9957 3.7825 -2.1240 33 1 5.3298 5.1027 -3.3390 34 1 5.9282 6.8174 -4.9628 35 1 8.1025 7.6401 -6.6308 36 1 10.4795 6.8882 -7.1491 37 1 11.6084 4.3331 -4.6697 38 1 11.9433 2.7708 -6.4450 39 1 12.3189 5.8575 -7.9129 40 1 12.9002 6.8126 -5.7521 41 1 9.2106 3.3170 -3.7301 42 1 2.2186 2.3501 -1.9422 43 1 3.1214 0.7772 -1.8430 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_13287722.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:28:49 Heat of formation + Delta-G solvation = -21.447523 kcal Electronic energy + Delta-G solvation = -25427.626611 eV Core-core repulsion = 21633.943762 eV Total energy + Delta-G solvation = -3793.682849 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.48195 -40.96130 -40.15282 -37.86038 -37.50661 -37.26577 -35.16854 -33.36927 -31.14408 -30.63985 -28.92401 -27.42428 -26.72198 -26.41502 -24.69226 -23.48928 -23.10197 -21.54362 -20.80721 -20.33201 -19.08342 -18.54346 -18.28667 -17.73595 -17.29438 -16.89201 -16.64362 -16.32211 -15.98462 -15.72746 -15.66254 -15.34142 -15.10681 -14.98227 -14.76960 -14.65358 -14.15263 -14.11117 -13.80949 -13.56503 -13.45389 -13.44527 -12.93113 -12.67622 -12.53684 -12.48108 -12.02052 -11.98892 -11.84817 -11.74406 -11.46037 -10.78680 -10.77120 -10.43945 -10.18205 -9.98749 -9.32037 -8.83521 -5.01530 -0.03923 0.19149 1.29551 1.42297 1.66288 1.93559 1.96053 2.03997 2.21991 2.83280 2.98823 3.43452 3.51654 3.55300 3.59697 3.67878 3.75189 3.75938 3.89182 3.95271 4.06739 4.13558 4.24123 4.26310 4.38730 4.40209 4.44691 4.48239 4.57979 4.68221 4.70008 4.76165 4.78517 4.80781 4.87195 4.96867 5.02296 5.10501 5.25398 5.26914 5.38301 5.47334 5.56097 5.59348 5.97476 6.26393 6.34165 6.59792 6.75584 7.37089 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.088 0.912 5 C -0.126 4.126 6 C -0.125 4.125 7 H 0.099 0.901 8 C 0.133 3.867 9 N -0.728 5.728 10 C 0.564 3.436 11 O -0.538 6.538 12 C -0.168 4.168 13 C -0.066 4.066 14 C -0.134 4.134 15 C 0.119 3.881 16 N -0.584 5.584 17 C 0.056 3.944 18 C -0.144 4.144 19 C -0.039 4.039 20 O -0.546 6.546 21 Si 0.688 3.312 22 C -0.102 4.102 23 C 0.010 3.990 24 C -0.151 4.151 25 H 0.086 0.914 26 H 0.042 0.958 27 H 0.041 0.959 28 H 0.096 0.904 29 H 0.077 0.923 30 H 0.072 0.928 31 H 0.073 0.927 32 H 0.399 0.601 33 H 0.129 0.871 34 H 0.128 0.872 35 H 0.421 0.579 36 H 0.170 0.830 37 H 0.072 0.928 38 H 0.380 0.620 39 H -0.253 1.253 40 H -0.256 1.256 41 H 0.139 0.861 42 H 0.070 0.930 43 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.335 4.338 -0.722 4.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.106 0.894 5 C -0.164 4.164 6 C -0.143 4.143 7 H 0.117 0.883 8 C 0.009 3.991 9 N -0.380 5.380 10 C 0.352 3.648 11 O -0.415 6.415 12 C -0.172 4.172 13 C -0.086 4.086 14 C -0.154 4.154 15 C 0.010 3.990 16 N -0.187 5.187 17 C -0.071 4.071 18 C -0.151 4.151 19 C -0.150 4.150 20 O -0.352 6.352 21 Si 0.588 3.412 22 C -0.106 4.106 23 C -0.010 4.010 24 C -0.189 4.189 25 H 0.105 0.895 26 H 0.061 0.939 27 H 0.060 0.940 28 H 0.115 0.885 29 H 0.095 0.905 30 H 0.090 0.910 31 H 0.091 0.909 32 H 0.234 0.766 33 H 0.146 0.854 34 H 0.146 0.854 35 H 0.259 0.741 36 H 0.187 0.813 37 H 0.090 0.910 38 H 0.228 0.772 39 H -0.178 1.178 40 H -0.180 1.180 41 H 0.157 0.843 42 H 0.089 0.911 43 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.076 4.646 -1.026 4.878 hybrid contribution -1.335 1.062 -0.143 1.712 sum -2.411 5.708 -1.169 6.306 Atomic orbital electron populations 1.22813 0.80975 1.03013 0.99954 1.87963 1.19813 1.27178 1.94538 1.23743 0.93894 0.85493 0.96703 0.89389 1.23208 0.95298 1.00264 0.97672 1.22566 0.93820 1.00013 0.97928 0.88276 1.21333 0.94238 0.91737 0.91755 1.45870 1.15394 1.32251 1.44513 1.18148 0.81553 0.84463 0.80620 1.90796 1.50431 1.37794 1.62528 1.19552 0.95950 0.99039 1.02699 1.20584 0.98497 0.93198 0.96286 1.19656 0.93781 1.01720 1.00254 1.18435 0.94697 0.92592 0.93250 1.41683 1.12270 1.27429 1.37296 1.21577 0.86660 0.97773 1.01083 1.19640 0.94897 0.98390 1.02155 1.24003 0.99706 0.91077 1.00220 1.86535 1.40793 1.31574 1.76288 0.94980 0.84913 0.81600 0.79664 1.18903 0.93718 0.97263 1.00728 1.20671 0.94685 0.94981 0.90628 1.23675 0.97049 1.01073 0.97071 0.89524 0.93940 0.93985 0.88527 0.90457 0.90966 0.90887 0.76570 0.85354 0.85391 0.74087 0.81338 0.90958 0.77240 1.17795 1.18034 0.84284 0.91113 0.88772 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.85 101.05 1.10 1.08 16 2 O -0.38 -0.76 10.72 -35.23 -0.38 -1.14 16 3 C 0.06 -0.02 4.32 -25.77 -0.11 -0.13 16 4 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.13 0.10 7.46 -25.92 -0.19 -0.09 16 6 C -0.12 0.20 3.75 -89.81 -0.34 -0.14 16 7 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 8 C 0.13 0.07 5.51 -4.04 -0.02 0.04 16 9 N -0.73 -0.47 5.51 -61.31 -0.34 -0.81 16 10 C 0.56 2.28 7.76 -12.42 -0.10 2.18 16 11 O -0.54 -4.23 16.33 5.30 0.09 -4.14 16 12 C -0.17 -0.51 5.87 -104.98 -0.62 -1.13 16 13 C -0.07 -0.02 9.46 -39.54 -0.37 -0.40 16 14 C -0.13 -0.05 10.00 -39.86 -0.40 -0.45 16 15 C 0.12 0.25 7.27 -83.95 -0.61 -0.36 16 16 N -0.58 -0.14 6.05 -10.61 -0.06 -0.21 16 17 C 0.06 0.07 10.43 -16.73 -0.17 -0.10 16 18 C -0.14 -0.44 5.61 -102.69 -0.58 -1.01 16 19 C -0.04 -0.04 3.05 36.01 0.11 0.07 16 20 O -0.55 -0.81 12.86 -35.23 -0.45 -1.26 16 21 Si 0.69 -0.83 30.80 -169.99 -5.23 -6.07 16 22 C -0.10 -0.40 6.34 -105.16 -0.67 -1.07 16 23 C 0.01 0.04 9.64 -38.86 -0.37 -0.33 16 24 C -0.15 0.14 7.48 -25.78 -0.19 -0.06 16 25 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.10 0.01 8.10 -51.93 -0.42 -0.41 16 29 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 31 H 0.07 0.13 7.85 -51.93 -0.41 -0.27 16 32 H 0.40 -0.85 6.47 -40.82 -0.26 -1.11 16 33 H 0.13 -0.36 6.36 -52.48 -0.33 -0.70 16 34 H 0.13 -0.29 8.06 -52.48 -0.42 -0.71 16 35 H 0.42 -1.29 8.96 -40.82 -0.37 -1.66 16 36 H 0.17 -0.11 6.30 -52.49 -0.33 -0.44 16 37 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 38 H 0.38 -1.39 8.74 45.56 0.40 -0.99 16 39 H -0.25 -0.30 7.04 56.52 0.40 0.10 16 40 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 41 H 0.14 0.67 7.64 -52.49 -0.40 0.27 16 42 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.09 0.04 7.90 -51.93 -0.41 -0.37 16 LS Contribution 360.45 15.07 5.43 5.43 Total: 0.00 -10.43 360.45 -10.43 -20.86 By element: Atomic # 1 Polarization: -4.84 SS G_CDS: -5.94 Total: -10.79 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -3.54 Total: -1.88 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -0.40 Total: -1.02 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -0.74 Total: -6.55 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.23 Total: -6.07 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -10.43 -10.43 -20.86 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_13287722.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.585 kcal (2) G-P(sol) polarization free energy of solvation -10.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.018 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.863 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds