Wall clock time and date at job start Sat Mar 6 2021 18:29:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42897 * 114.00083 * 2 1 4 4 H 1.08999 * 112.90793 * 341.25336 * 3 2 1 5 5 C 1.53781 * 113.61595 * 112.50279 * 3 2 1 6 6 C 1.54049 * 87.08031 * 139.97562 * 5 3 2 7 7 H 1.09000 * 113.61076 * 89.06984 * 6 5 3 8 8 C 1.52990 * 113.70090 * 220.05426 * 6 5 3 9 9 N 1.46497 * 109.47171 * 272.42414 * 8 6 5 10 10 C 1.34777 * 120.00242 * 179.97438 * 9 8 6 11 11 O 1.21281 * 119.99992 * 0.02562 * 10 9 8 12 12 C 1.50705 * 119.99937 * 179.97438 * 10 9 8 13 13 C 1.53005 * 109.46962 * 180.02562 * 12 10 9 14 14 O 1.42897 * 109.47278 * 180.02562 * 13 12 10 15 15 C 1.35901 * 117.00077 * 179.97438 * 14 13 12 16 16 C 1.38708 * 120.05368 * 180.02562 * 15 14 13 17 17 C 1.38171 * 119.94484 * 180.02562 * 16 15 14 18 18 C 1.50698 * 119.97224 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.47144 * 299.99898 * 18 17 16 20 20 Si 1.86300 * 109.46794 * 179.97438 * 18 17 16 21 21 C 1.38243 * 120.05006 * 359.97438 * 17 16 15 22 22 C 1.38286 * 120.11432 * 0.02562 * 21 17 16 23 23 C 1.38124 * 120.05634 * 359.67547 * 22 21 17 24 24 C 1.53781 * 113.61404 * 210.00015 * 3 2 1 25 25 H 1.08998 * 109.47276 * 59.99466 * 1 2 3 26 26 H 1.08997 * 109.47669 * 180.02562 * 1 2 3 27 27 H 1.09005 * 109.47061 * 300.00053 * 1 2 3 28 28 H 1.09005 * 113.61471 * 254.53145 * 5 3 2 29 29 H 1.08996 * 113.61178 * 25.34487 * 5 3 2 30 30 H 1.09007 * 109.47036 * 32.41747 * 8 6 5 31 31 H 1.08994 * 109.47734 * 152.42153 * 8 6 5 32 32 H 0.97003 * 120.00176 * 359.97438 * 9 8 6 33 33 H 1.08994 * 109.47250 * 300.00216 * 12 10 9 34 34 H 1.09000 * 109.46854 * 60.00842 * 12 10 9 35 35 H 1.09002 * 109.47242 * 300.00272 * 13 12 10 36 36 H 1.09003 * 109.47193 * 60.00116 * 13 12 10 37 37 H 1.08001 * 120.03129 * 359.97438 * 16 15 14 38 38 H 1.08990 * 109.47219 * 59.99955 * 18 17 16 39 39 H 0.96703 * 113.99990 * 180.02562 * 19 18 17 40 40 H 1.48504 * 110.00249 * 60.00298 * 20 18 17 41 41 H 1.48500 * 109.99844 * 181.31617 * 20 18 17 42 42 H 1.08005 * 119.93797 * 180.02562 * 21 17 16 43 43 H 1.08002 * 119.96958 * 179.97438 * 22 21 17 44 44 H 1.07996 * 120.02773 * 180.32586 * 23 22 21 45 45 H 1.09002 * 113.61445 * 334.56823 * 24 3 2 46 46 H 1.09002 * 113.61408 * 105.38554 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 1 1.3142 2.0797 -0.3227 5 6 2.7534 1.6489 1.3017 6 6 3.8246 2.3191 0.4206 7 1 3.6238 3.3701 0.2126 8 6 5.2569 2.0694 0.8968 9 7 5.6304 3.0910 1.8782 10 6 6.8558 3.0708 2.4389 11 8 7.6496 2.2072 2.1307 12 6 7.2401 4.1221 3.4481 13 6 8.6725 3.8723 3.9244 14 8 9.0367 4.8688 4.8817 15 6 10.2870 4.7905 5.4085 16 6 10.7066 5.7250 6.3437 17 6 11.9784 5.6436 6.8774 18 6 12.4347 6.6582 7.8940 19 8 12.3845 7.9651 7.3182 20 14 14.1822 6.2743 8.4133 21 6 12.8323 4.6315 6.4803 22 6 12.4164 3.6986 5.5481 23 6 11.1438 3.7720 5.0162 24 6 3.3755 1.3718 -0.7045 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 2.2140 2.3477 1.9412 29 1 3.1153 0.7739 1.8417 30 1 5.3201 1.0833 1.3570 31 1 5.9364 2.1175 0.0459 32 1 4.9957 3.7820 2.1245 33 1 7.1774 5.1080 2.9875 34 1 6.5604 4.0746 4.2989 35 1 8.7356 2.8864 4.3848 36 1 9.3519 3.9201 3.0734 37 1 10.0400 6.5161 6.6539 38 1 11.7804 6.6195 8.7648 39 1 12.6657 8.6700 7.9175 40 1 15.0847 6.3235 7.2350 41 1 14.6328 7.2488 9.4391 42 1 13.8260 4.5693 6.8990 43 1 13.0855 2.9091 5.2392 44 1 10.8176 3.0402 4.2921 45 1 3.9088 0.4212 -0.7138 46 1 3.3381 1.8457 -1.6854 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:29:49 Heat of formation + Delta-G solvation = -98.515173 kcal Electronic energy + Delta-G solvation = -25683.087997 eV Core-core repulsion = 21733.721624 eV Total energy + Delta-G solvation = -3949.366372 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.33452 -40.96619 -40.25283 -38.97387 -37.52015 -37.35329 -35.29799 -33.34139 -32.50026 -30.86277 -29.27293 -27.55065 -26.93665 -26.77479 -25.16811 -23.55256 -23.26751 -21.93112 -21.49734 -20.58928 -19.09794 -18.50717 -18.11741 -17.71195 -17.46977 -17.19081 -17.01511 -16.74733 -16.65790 -16.35431 -15.97688 -15.74520 -15.63734 -15.36421 -14.66445 -14.52116 -14.44474 -14.26114 -13.90184 -13.80432 -13.64527 -13.53209 -13.38578 -13.01367 -12.89888 -12.83764 -12.58984 -12.29190 -12.07272 -11.90756 -11.82871 -11.74531 -11.59398 -11.54337 -10.95441 -10.52906 -10.50344 -10.15397 -9.78476 -9.13602 -4.93340 0.31854 0.52248 1.29022 1.55285 1.61947 1.72914 1.98570 2.48345 2.73342 2.77690 3.34385 3.36015 3.44928 3.55773 3.67495 3.69065 3.79961 3.85639 3.91654 3.94880 4.02312 4.15368 4.15675 4.28197 4.32838 4.34884 4.35446 4.40324 4.51087 4.57611 4.61036 4.63680 4.66940 4.70880 4.72975 4.76427 4.77363 4.88223 5.01993 5.07904 5.16348 5.35424 5.36570 5.48637 5.56958 5.77477 6.20670 6.34744 6.45098 6.46706 7.10994 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.089 0.911 5 C -0.151 4.151 6 C -0.125 4.125 7 H 0.100 0.900 8 C 0.131 3.869 9 N -0.728 5.728 10 C 0.519 3.481 11 O -0.538 6.538 12 C -0.141 4.141 13 C 0.074 3.926 14 O -0.317 6.317 15 C 0.132 3.868 16 C -0.124 4.124 17 C -0.036 4.036 18 C -0.077 4.077 19 O -0.535 6.535 20 Si 0.686 3.314 21 C -0.153 4.153 22 C -0.073 4.073 23 C -0.203 4.203 24 C -0.127 4.127 25 H 0.042 0.958 26 H 0.087 0.913 27 H 0.042 0.958 28 H 0.071 0.929 29 H 0.093 0.907 30 H 0.073 0.927 31 H 0.072 0.928 32 H 0.403 0.597 33 H 0.107 0.893 34 H 0.107 0.893 35 H 0.073 0.927 36 H 0.072 0.928 37 H 0.132 0.868 38 H 0.078 0.922 39 H 0.380 0.620 40 H -0.255 1.255 41 H -0.261 1.261 42 H 0.129 0.871 43 H 0.132 0.868 44 H 0.133 0.867 45 H 0.096 0.904 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.195 0.669 1.358 4.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.107 0.893 5 C -0.189 4.189 6 C -0.144 4.144 7 H 0.118 0.882 8 C 0.008 3.992 9 N -0.380 5.380 10 C 0.305 3.695 11 O -0.415 6.415 12 C -0.181 4.181 13 C -0.001 4.001 14 O -0.231 6.231 15 C 0.087 3.913 16 C -0.143 4.143 17 C -0.037 4.037 18 C -0.187 4.187 19 O -0.342 6.342 20 Si 0.587 3.413 21 C -0.170 4.170 22 C -0.091 4.091 23 C -0.221 4.221 24 C -0.165 4.165 25 H 0.061 0.939 26 H 0.105 0.895 27 H 0.060 0.940 28 H 0.090 0.910 29 H 0.112 0.888 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.237 0.763 33 H 0.125 0.875 34 H 0.125 0.875 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.150 0.850 38 H 0.096 0.904 39 H 0.228 0.772 40 H -0.179 1.179 41 H -0.187 1.187 42 H 0.146 0.854 43 H 0.150 0.850 44 H 0.151 0.849 45 H 0.114 0.886 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -3.063 -0.057 0.685 3.139 hybrid contribution -0.898 1.639 -0.043 1.870 sum -3.961 1.583 0.642 4.313 Atomic orbital electron populations 1.22817 0.80899 1.03055 0.99998 1.87962 1.19884 1.27138 1.94549 1.23687 0.93917 0.85571 0.96657 0.89338 1.23678 0.97053 1.01031 0.97125 1.22617 0.93661 1.00093 0.97984 0.88174 1.21354 0.94424 0.91669 0.91732 1.45950 1.15427 1.32268 1.44352 1.20296 0.81747 0.85780 0.81659 1.90759 1.50267 1.38047 1.62430 1.21466 0.97317 0.99852 0.99485 1.22416 0.95087 0.91082 0.91545 1.85967 1.28866 1.51832 1.56390 1.18921 0.83958 0.94686 0.93747 1.20200 0.96530 0.99378 0.98181 1.19009 0.93239 0.94696 0.96723 1.24834 1.12198 0.84352 0.97285 1.86597 1.89147 1.15181 1.43305 0.94961 0.74812 0.90175 0.81360 1.20855 0.99429 0.96704 1.00034 1.20899 0.95143 0.98010 0.95005 1.21387 0.95588 1.00392 1.04762 1.23211 0.95348 1.00225 0.97705 0.93895 0.89491 0.93961 0.91038 0.88808 0.90864 0.90945 0.76256 0.87491 0.87461 0.90865 0.90931 0.84988 0.90361 0.77209 1.17931 1.18665 0.85392 0.85042 0.84923 0.88550 0.90412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.55 10.71 -35.23 -0.38 -0.93 16 3 C 0.06 -0.05 4.31 -25.92 -0.11 -0.17 16 4 H 0.09 -0.20 7.87 -51.93 -0.41 -0.61 16 5 C -0.15 0.27 7.47 -25.78 -0.19 0.08 16 6 C -0.12 0.33 3.76 -89.67 -0.34 -0.01 16 7 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 8 C 0.13 -0.13 5.52 -4.05 -0.02 -0.15 16 9 N -0.73 1.20 5.56 -60.30 -0.33 0.87 16 10 C 0.52 0.37 7.83 -10.98 -0.09 0.29 16 11 O -0.54 -2.63 15.98 5.56 0.09 -2.54 16 12 C -0.14 0.19 6.07 -27.88 -0.17 0.02 16 13 C 0.07 0.07 4.03 37.16 0.15 0.22 16 14 O -0.32 -0.83 10.14 -19.43 -0.20 -1.02 16 15 C 0.13 0.42 6.69 -39.22 -0.26 0.16 16 16 C -0.12 -0.40 9.55 -39.43 -0.38 -0.77 16 17 C -0.04 -0.09 5.42 -104.65 -0.57 -0.65 16 18 C -0.08 -0.05 2.81 36.00 0.10 0.05 16 19 O -0.54 -1.00 12.74 -35.23 -0.45 -1.45 16 20 Si 0.69 -0.28 29.79 -169.99 -5.06 -5.34 16 21 C -0.15 -0.22 8.67 -39.56 -0.34 -0.57 16 22 C -0.07 -0.09 10.04 -39.61 -0.40 -0.49 16 23 C -0.20 -0.44 9.04 -39.43 -0.36 -0.79 16 24 C -0.13 0.19 7.46 -25.92 -0.19 0.00 16 25 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 26 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 29 H 0.09 -0.05 7.91 -51.93 -0.41 -0.46 16 30 H 0.07 0.03 7.85 -51.93 -0.41 -0.38 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.40 -1.76 8.47 -40.82 -0.35 -2.11 16 33 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 34 H 0.11 -0.30 8.14 -51.93 -0.42 -0.73 16 35 H 0.07 0.08 7.61 -51.93 -0.39 -0.31 16 36 H 0.07 0.10 7.63 -51.93 -0.40 -0.30 16 37 H 0.13 0.37 8.06 -52.49 -0.42 -0.05 16 38 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 39 H 0.38 -0.87 8.74 45.56 0.40 -0.48 16 40 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 41 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 42 H 0.13 -0.07 4.87 -52.48 -0.26 -0.32 16 43 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 44 H 0.13 0.14 6.30 -52.49 -0.33 -0.19 16 45 H 0.10 -0.06 8.10 -51.93 -0.42 -0.48 16 46 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 LS Contribution 381.37 15.07 5.75 5.75 Total: 0.00 -8.96 381.37 -9.89 -18.85 By element: Atomic # 1 Polarization: -5.22 SS G_CDS: -7.23 Total: -12.45 kcal Atomic # 6 Polarization: 0.33 SS G_CDS: -2.07 Total: -1.74 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -0.33 Total: 0.87 kcal Atomic # 8 Polarization: -5.01 SS G_CDS: -0.93 Total: -5.94 kcal Atomic # 14 Polarization: -0.28 SS G_CDS: -5.06 Total: -5.34 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -8.96 -9.89 -18.85 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.662 kcal (2) G-P(sol) polarization free energy of solvation -8.964 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.626 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.853 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds