Wall clock time and date at job start Sat Mar 6 2021 18:29:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42900 * 114.00272 * 2 1 4 4 H 1.08998 * 112.84778 * 341.20595 * 3 2 1 5 5 C 1.53960 * 113.66601 * 112.44116 * 3 2 1 6 6 C 1.53784 * 87.01808 * 139.93406 * 5 3 2 7 7 H 1.08997 * 113.60960 * 89.23041 * 6 5 3 8 8 C 1.52996 * 113.61355 * 220.04813 * 6 5 3 9 9 N 1.46498 * 109.47059 * 274.13660 * 8 6 5 10 10 C 1.34777 * 119.99828 * 179.72339 * 9 8 6 11 11 O 1.21553 * 119.99924 * 0.28083 * 10 9 8 12 12 C 1.47851 * 120.00199 * 180.27782 * 10 9 8 13 13 C 1.39550 * 120.14274 * 179.72436 * 12 10 9 14 14 C 1.37986 * 119.84961 * 179.79006 * 13 12 10 15 15 C 1.50696 * 119.92920 * 180.23188 * 14 13 12 16 16 O 1.42897 * 109.47007 * 270.25683 * 15 14 13 17 17 C 1.35904 * 117.00011 * 179.97438 * 16 15 14 18 18 C 1.38707 * 120.05996 * 179.97438 * 17 16 15 19 19 C 1.38161 * 119.94710 * 180.02562 * 18 17 16 20 20 C 1.50700 * 119.97229 * 180.02562 * 19 18 17 21 21 O 1.42897 * 109.47117 * 300.00078 * 20 19 18 22 22 Si 1.86303 * 109.47239 * 179.97438 * 20 19 18 23 23 C 1.38246 * 120.05627 * 0.02562 * 19 18 17 24 24 C 1.38284 * 120.10868 * 0.02562 * 23 19 18 25 25 C 1.38116 * 120.05665 * 359.68577 * 24 23 19 26 26 C 1.38340 * 120.14242 * 0.48532 * 14 13 12 27 27 C 1.38386 * 120.29328 * 359.74914 * 26 14 13 28 28 C 1.37931 * 120.14495 * 0.02562 * 27 26 14 29 29 C 1.53781 * 87.17365 * 334.63957 * 6 5 3 30 30 H 1.08994 * 109.47131 * 59.99256 * 1 2 3 31 31 H 1.09003 * 109.47040 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.46498 * 299.99808 * 1 2 3 33 33 H 1.09004 * 113.60888 * 25.41813 * 5 3 2 34 34 H 1.08999 * 113.66643 * 254.46824 * 5 3 2 35 35 H 1.09004 * 109.47066 * 154.13928 * 8 6 5 36 36 H 1.08994 * 109.46974 * 34.14075 * 8 6 5 37 37 H 0.97001 * 120.00384 * 0.02562 * 9 8 6 38 38 H 1.07995 * 120.08150 * 0.02733 * 13 12 10 39 39 H 1.09001 * 109.46926 * 30.25966 * 15 14 13 40 40 H 1.08997 * 109.47310 * 150.25327 * 15 14 13 41 41 H 1.08005 * 120.02604 * 359.97438 * 18 17 16 42 42 H 1.08999 * 109.47182 * 59.99779 * 20 19 18 43 43 H 0.96705 * 114.00440 * 180.02562 * 21 20 19 44 44 H 1.48504 * 109.99640 * 60.00030 * 22 20 19 45 45 H 1.48498 * 109.99928 * 181.31864 * 22 20 19 46 46 H 1.08004 * 119.94521 * 180.02562 * 23 19 18 47 47 H 1.08004 * 119.96671 * 179.97438 * 24 23 19 48 48 H 1.08001 * 120.02981 * 180.31775 * 25 24 23 49 49 H 1.08001 * 119.85205 * 179.71648 * 26 14 13 50 50 H 1.07998 * 119.92532 * 179.97438 * 27 26 14 51 51 H 1.08005 * 120.07459 * 180.02562 * 28 27 26 52 52 H 1.09001 * 113.60987 * 139.93392 * 29 6 5 53 53 H 1.09000 * 113.61716 * 270.75716 * 29 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3138 2.0789 -0.3236 5 6 2.7534 1.6510 1.3033 6 6 3.8228 2.3181 0.4222 7 1 3.6236 3.3693 0.2144 8 6 5.2544 2.0678 0.9006 9 7 5.6134 3.0666 1.9104 10 6 6.8338 3.0388 2.4816 11 8 7.6384 2.1882 2.1552 12 6 7.1941 4.0431 3.5052 13 6 8.4549 4.0135 4.1026 14 6 8.7862 4.9564 5.0541 15 6 10.1491 4.9293 5.6967 16 8 10.1091 4.1057 6.8637 17 6 11.2655 3.9733 7.5653 18 6 11.2984 3.1891 8.7090 19 6 12.4751 3.0566 9.4208 20 6 12.5117 2.2042 10.6630 21 8 11.5844 2.7184 11.6209 22 14 14.2293 2.2308 11.3841 23 6 13.6191 3.7052 8.9944 24 6 13.5886 4.4885 7.8551 25 6 12.4163 4.6194 7.1368 26 6 7.8682 5.9232 5.4232 27 6 6.6145 5.9551 4.8381 28 6 6.2723 5.0213 3.8824 29 6 3.3756 1.3719 -0.7045 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3632 0.5138 0.8900 33 1 3.1163 0.7768 1.8439 34 1 2.2147 2.3512 1.9417 35 1 5.9384 2.1437 0.0553 36 1 5.3231 1.0707 1.3353 37 1 4.9713 3.7453 2.1711 38 1 9.1710 3.2569 3.8183 39 1 10.8753 4.5252 4.9914 40 1 10.4391 5.9421 5.9764 41 1 10.4047 2.6831 9.0432 42 1 12.2406 1.1796 10.4087 43 1 11.5547 2.2179 12.4478 44 1 14.6113 3.6223 11.7350 45 1 14.2865 1.3685 12.5917 46 1 14.5381 3.6001 9.5519 47 1 14.4836 4.9946 7.5243 48 1 12.3943 5.2271 6.2442 49 1 8.1309 6.6561 6.1717 50 1 5.9023 6.7122 5.1310 51 1 5.2937 5.0474 3.4261 52 1 3.3384 1.8472 -1.6848 53 1 3.9099 0.4218 -0.7148 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12345242_4549630.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:29:54 Heat of formation + Delta-G solvation = -62.683724 kcal Electronic energy + Delta-G solvation = -33136.040145 eV Core-core repulsion = 28519.785360 eV Total energy + Delta-G solvation = -4616.254785 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -41.58706 -41.21447 -40.49362 -39.65013 -38.83058 -37.48093 -37.43560 -35.48170 -33.52263 -32.60283 -32.28877 -31.09091 -29.31763 -27.76565 -27.40579 -26.69545 -26.60097 -24.95675 -23.65274 -23.24882 -23.05075 -22.10073 -21.43708 -20.49214 -19.03913 -18.94002 -18.58127 -17.79937 -17.49802 -17.30011 -17.11995 -17.09270 -16.73832 -16.69301 -16.44007 -16.01298 -15.91448 -15.84811 -15.61312 -15.44185 -15.15074 -14.75540 -14.56491 -14.48228 -14.34246 -14.04639 -13.82315 -13.62694 -13.57329 -13.45746 -13.44222 -13.24687 -12.88991 -12.80424 -12.48145 -12.45188 -12.26396 -12.01713 -11.99152 -11.93067 -11.73526 -11.71316 -11.43975 -11.11368 -10.58948 -10.43355 -10.33928 -10.05039 -9.96538 -9.90257 -9.26909 -4.92185 -0.28642 0.13869 0.19668 0.39260 1.27559 1.60645 1.65698 1.93527 1.98542 2.23983 2.62742 2.85476 2.87652 3.34379 3.42146 3.50930 3.53248 3.65165 3.75094 3.79464 3.80537 3.82542 3.83488 3.98657 4.06554 4.08837 4.11832 4.17002 4.22272 4.26027 4.28295 4.32858 4.45740 4.47377 4.50838 4.54015 4.63479 4.66013 4.68407 4.74569 4.80446 4.82531 4.85792 4.87707 4.96972 5.00119 5.12346 5.16746 5.22427 5.24309 5.28519 5.36550 5.37502 5.40294 5.45231 5.69677 5.76630 6.31030 6.35819 6.40429 6.55534 7.07443 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.407 6.407 3 C 0.054 3.946 4 H 0.107 0.893 5 C -0.151 4.151 6 C -0.107 4.107 7 H 0.126 0.874 8 C 0.132 3.868 9 N -0.707 5.707 10 C 0.554 3.446 11 O -0.584 6.584 12 C -0.156 4.156 13 C -0.054 4.054 14 C -0.114 4.114 15 C 0.098 3.902 16 O -0.328 6.328 17 C 0.116 3.884 18 C -0.149 4.149 19 C -0.048 4.048 20 C -0.095 4.095 21 O -0.559 6.559 22 Si 0.776 3.224 23 C -0.161 4.161 24 C -0.072 4.072 25 C -0.208 4.208 26 C -0.070 4.070 27 C -0.125 4.125 28 C -0.068 4.068 29 C -0.131 4.131 30 H 0.052 0.948 31 H 0.087 0.913 32 H 0.050 0.950 33 H 0.074 0.926 34 H 0.088 0.912 35 H 0.064 0.936 36 H 0.054 0.946 37 H 0.416 0.584 38 H 0.119 0.881 39 H 0.081 0.919 40 H 0.095 0.905 41 H 0.118 0.882 42 H 0.091 0.909 43 H 0.395 0.605 44 H -0.294 1.294 45 H -0.285 1.285 46 H 0.147 0.853 47 H 0.160 0.840 48 H 0.151 0.849 49 H 0.149 0.851 50 H 0.165 0.835 51 H 0.160 0.840 52 H 0.089 0.911 53 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.781 5.287 -1.608 6.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.326 6.326 3 C -0.003 4.003 4 H 0.125 0.875 5 C -0.188 4.188 6 C -0.126 4.126 7 H 0.144 0.856 8 C 0.009 3.991 9 N -0.360 5.360 10 C 0.342 3.658 11 O -0.466 6.466 12 C -0.159 4.159 13 C -0.074 4.074 14 C -0.114 4.114 15 C 0.024 3.976 16 O -0.243 6.243 17 C 0.071 3.929 18 C -0.168 4.168 19 C -0.048 4.048 20 C -0.202 4.202 21 O -0.369 6.369 22 Si 0.680 3.320 23 C -0.178 4.178 24 C -0.090 4.090 25 C -0.227 4.227 26 C -0.088 4.088 27 C -0.143 4.143 28 C -0.086 4.086 29 C -0.169 4.169 30 H 0.071 0.929 31 H 0.106 0.894 32 H 0.068 0.932 33 H 0.092 0.908 34 H 0.106 0.894 35 H 0.083 0.917 36 H 0.072 0.928 37 H 0.255 0.745 38 H 0.137 0.863 39 H 0.099 0.901 40 H 0.113 0.887 41 H 0.136 0.864 42 H 0.109 0.891 43 H 0.245 0.755 44 H -0.222 1.222 45 H -0.212 1.212 46 H 0.164 0.836 47 H 0.178 0.822 48 H 0.169 0.831 49 H 0.166 0.834 50 H 0.182 0.818 51 H 0.178 0.822 52 H 0.107 0.893 53 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.964 5.035 -1.633 5.646 hybrid contribution -1.325 -0.011 0.876 1.588 sum -3.289 5.025 -0.757 6.053 Atomic orbital electron populations 1.22934 0.79915 1.03496 1.00842 1.87928 1.21196 1.28738 1.94729 1.23930 0.94236 0.85217 0.96965 0.87477 1.23619 0.97287 1.00773 0.97160 1.22513 0.91750 1.01221 0.97108 0.85642 1.21332 0.95859 0.91318 0.90598 1.45755 1.14764 1.33863 1.41596 1.18585 0.82052 0.83929 0.81195 1.90775 1.51278 1.39840 1.64659 1.19888 0.96522 0.98948 1.00504 1.21172 0.95620 0.96450 0.94109 1.19527 0.96335 0.97425 0.98120 1.21756 0.94785 0.95762 0.85269 1.86126 1.31701 1.67145 1.39298 1.19162 0.85769 0.95919 0.92050 1.20300 0.99022 1.02426 0.95027 1.19293 0.93325 0.97414 0.94754 1.25187 1.06023 0.98732 0.90276 1.86547 1.61744 1.58860 1.29759 0.93955 0.77019 0.78479 0.82534 1.21144 0.97857 0.99576 0.99265 1.21279 0.98301 0.96123 0.93271 1.21584 0.92783 1.04655 1.03632 1.21652 0.92941 0.96859 0.97361 1.21521 0.96885 0.99621 0.96245 1.21697 0.99027 0.92145 0.95731 1.23220 0.95207 0.99863 0.98589 0.92899 0.89406 0.93175 0.90766 0.89384 0.91736 0.92756 0.74539 0.86283 0.90118 0.88715 0.86392 0.89080 0.75451 1.22158 1.21203 0.83595 0.82226 0.83143 0.83360 0.81764 0.82232 0.89261 0.90209 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.41 -1.61 10.72 -148.98 -1.60 -3.21 16 3 C 0.05 -0.09 4.31 31.18 0.13 0.04 16 4 H 0.11 -0.61 7.87 -2.39 -0.02 -0.63 16 5 C -0.15 0.46 7.48 31.18 0.23 0.70 16 6 C -0.11 0.53 3.75 -10.27 -0.04 0.49 16 7 H 0.13 -1.20 8.14 -2.39 -0.02 -1.22 16 8 C 0.13 0.08 5.50 86.38 0.47 0.56 16 9 N -0.71 0.14 5.51 -465.98 -2.57 -2.42 16 10 C 0.55 4.15 7.77 86.79 0.67 4.83 16 11 O -0.58 -9.88 16.35 -3.88 -0.06 -9.94 16 12 C -0.16 -0.62 5.87 -20.09 -0.12 -0.74 16 13 C -0.05 -0.34 9.25 22.53 0.21 -0.13 16 14 C -0.11 -0.30 5.50 -19.90 -0.11 -0.41 16 15 C 0.10 0.14 4.86 71.23 0.35 0.49 16 16 O -0.33 -2.56 10.12 -92.47 -0.94 -3.50 16 17 C 0.12 0.84 6.69 22.51 0.15 1.00 16 18 C -0.15 -1.31 9.55 22.36 0.21 -1.10 16 19 C -0.05 -0.27 5.42 -19.88 -0.11 -0.38 16 20 C -0.09 -0.22 2.81 71.24 0.20 -0.02 16 21 O -0.56 -2.87 12.74 -148.98 -1.90 -4.77 16 22 Si 0.78 -0.69 29.79 68.60 2.04 1.36 16 23 C -0.16 -0.36 8.67 22.28 0.19 -0.17 16 24 C -0.07 -0.03 10.04 22.25 0.22 0.19 16 25 C -0.21 -0.49 9.04 22.36 0.20 -0.29 16 26 C -0.07 0.11 9.69 22.33 0.22 0.32 16 27 C -0.13 0.56 10.03 22.23 0.22 0.78 16 28 C -0.07 0.22 9.54 22.53 0.21 0.44 16 29 C -0.13 0.30 7.48 31.12 0.23 0.53 16 30 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 33 H 0.07 0.09 7.92 -2.38 -0.02 0.08 16 34 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 35 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 36 H 0.05 0.26 7.87 -2.39 -0.02 0.25 16 37 H 0.42 -3.08 6.51 -92.71 -0.60 -3.68 16 38 H 0.12 1.09 7.65 -2.91 -0.02 1.07 16 39 H 0.08 -0.01 7.59 -2.39 -0.02 -0.03 16 40 H 0.09 -0.29 7.62 -2.39 -0.02 -0.31 16 41 H 0.12 1.21 8.06 -2.91 -0.02 1.18 16 42 H 0.09 -0.07 7.96 -2.39 -0.02 -0.09 16 43 H 0.40 -1.34 8.74 -74.05 -0.65 -1.99 16 44 H -0.29 -1.68 7.11 99.48 0.71 -0.97 16 45 H -0.28 -0.83 7.11 99.48 0.71 -0.12 16 46 H 0.15 -0.34 4.87 -2.91 -0.01 -0.35 16 47 H 0.16 -0.91 8.06 -2.91 -0.02 -0.93 16 48 H 0.15 -0.39 6.30 -2.91 -0.02 -0.41 16 49 H 0.15 -0.80 8.06 -2.91 -0.02 -0.83 16 50 H 0.16 -1.72 8.06 -2.91 -0.02 -1.74 16 51 H 0.16 -1.69 6.41 -2.91 -0.02 -1.71 16 52 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 53 H 0.08 0.09 8.10 -2.39 -0.02 0.07 16 Total: 0.00 -27.72 438.17 -0.29 -28.01 By element: Atomic # 1 Polarization: -13.58 SS G_CDS: -0.27 Total: -13.85 kcal Atomic # 6 Polarization: 3.32 SS G_CDS: 5.00 Total: 8.32 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -2.57 Total: -2.42 kcal Atomic # 8 Polarization: -16.92 SS G_CDS: -4.49 Total: -21.41 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: 2.04 Total: 1.36 kcal Total: -27.72 -0.29 -28.01 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_4549630.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.672 kcal (2) G-P(sol) polarization free energy of solvation -27.722 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.290 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.012 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.684 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds