Wall clock time and date at job start Sat Mar 6 2021 18:30:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.42897 * 113.99517 * 2 1 4 4 H 1.09001 * 112.85691 * 18.80725 * 3 2 1 5 5 C 1.53788 * 113.61061 * 150.00411 * 3 2 1 6 6 C 1.53772 * 87.08197 * 139.97920 * 5 3 2 7 7 H 1.09002 * 113.61797 * 89.20134 * 6 5 3 8 8 C 1.53000 * 113.61476 * 220.01375 * 6 5 3 9 9 N 1.46499 * 109.47292 * 185.00074 * 8 6 5 10 10 C 1.34774 * 120.00318 * 180.02562 * 9 8 6 11 11 O 1.21612 * 119.99891 * 0.02562 * 10 9 8 12 12 C 1.47375 * 120.00388 * 179.97438 * 10 9 8 13 13 C 1.36417 * 127.19706 * 180.02562 * 12 10 9 14 14 C 1.50706 * 125.79764 * 359.95947 * 13 12 10 15 15 O 1.42906 * 109.46702 * 89.99918 * 14 13 12 16 16 C 1.35903 * 116.99522 * 179.97438 * 15 14 13 17 17 C 1.38725 * 120.05861 * 359.72783 * 16 15 14 18 18 C 1.38145 * 119.94387 * 179.74053 * 17 16 15 19 19 C 1.38270 * 120.05488 * 0.51442 * 18 17 16 20 20 C 1.50696 * 119.94227 * 179.74316 * 19 18 17 21 21 O 1.42901 * 109.46966 * 245.01571 * 20 19 18 22 22 Si 1.86294 * 109.47511 * 5.02176 * 20 19 18 23 23 C 1.38269 * 120.11023 * 359.75936 * 19 18 17 24 24 C 1.38139 * 120.05370 * 359.97438 * 23 19 18 25 25 O 1.33648 * 108.39909 * 180.22625 * 13 12 10 26 26 C 1.34214 * 110.91030 * 359.59195 * 25 13 12 27 27 C 1.34179 * 109.12337 * 0.41210 * 26 25 13 28 28 C 1.53775 * 87.08513 * 334.56816 * 6 5 3 29 29 H 1.09003 * 109.46783 * 60.00035 * 1 2 3 30 30 H 1.09005 * 109.46716 * 179.97438 * 1 2 3 31 31 H 1.08996 * 109.46662 * 299.99846 * 1 2 3 32 32 H 1.08996 * 113.61166 * 25.43060 * 5 3 2 33 33 H 1.09002 * 113.61102 * 254.52936 * 5 3 2 34 34 H 1.09001 * 109.46863 * 65.00397 * 8 6 5 35 35 H 1.08994 * 109.47468 * 305.00201 * 8 6 5 36 36 H 0.97001 * 120.00057 * 0.02562 * 9 8 6 37 37 H 1.09000 * 109.47318 * 209.99497 * 14 13 12 38 38 H 1.09000 * 109.47161 * 330.00128 * 14 13 12 39 39 H 1.08000 * 120.02603 * 359.97438 * 17 16 15 40 40 H 1.08002 * 119.97017 * 180.23008 * 18 17 16 41 41 H 1.09006 * 109.46939 * 125.01828 * 20 19 18 42 42 H 0.96703 * 113.99584 * 60.00659 * 21 20 19 43 43 H 1.48497 * 110.00233 * 180.02562 * 22 20 19 44 44 H 1.48508 * 110.00036 * 301.31705 * 22 20 19 45 45 H 1.07997 * 119.96991 * 179.97438 * 23 19 18 46 46 H 1.08006 * 120.02293 * 179.97438 * 24 23 19 47 47 H 1.08001 * 125.43646 * 180.19219 * 26 25 13 48 48 H 1.07997 * 127.02597 * 179.75533 * 27 26 25 49 49 H 1.09003 * 113.62027 * 139.98114 * 28 6 5 50 50 H 1.08998 * 113.61364 * 270.88459 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 0.3238 5 6 3.3756 1.3719 0.7045 6 6 3.8227 2.3181 -0.4222 7 1 3.6236 3.3695 -0.2143 8 6 5.2543 2.0681 -0.9006 9 7 5.6260 3.0888 -1.8836 10 6 6.8504 3.0682 -2.4463 11 8 7.6466 2.2020 -2.1385 12 6 7.2242 4.0946 -3.4356 13 6 8.4141 4.2125 -4.0923 14 6 9.6032 3.3006 -3.9326 15 8 9.5103 2.2279 -4.8722 16 6 10.5118 1.3092 -4.8606 17 6 11.5650 1.4407 -3.9673 18 6 12.5790 0.5026 -3.9539 19 6 12.5502 -0.5609 -4.8371 20 6 13.6606 -1.5796 -4.8242 21 8 14.3741 -1.5221 -6.0610 22 14 14.8252 -1.2112 -3.4176 23 6 11.5044 -0.6911 -5.7322 24 6 10.4853 0.2413 -5.7458 25 8 8.3480 5.2776 -4.8970 26 6 7.1482 5.8722 -4.8070 27 6 6.3924 5.2055 -3.9213 28 6 2.7534 1.6490 -1.3017 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3632 0.5138 0.8900 32 1 3.9088 0.4213 0.7136 33 1 3.3384 1.8471 1.6848 34 1 5.3167 1.0816 -1.3599 35 1 5.9351 2.1170 -0.0509 36 1 4.9909 3.7795 -2.1294 37 1 10.5193 3.8631 -4.1129 38 1 9.6181 2.8968 -2.9203 39 1 11.5903 2.2737 -3.2804 40 1 13.3973 0.6025 -3.2562 41 1 13.2381 -2.5760 -4.6945 42 1 14.7778 -0.6623 -6.2425 43 1 15.9252 -2.2084 -3.3944 44 1 15.3837 0.1569 -3.5657 45 1 11.4844 -1.5224 -6.4213 46 1 9.6689 0.1394 -6.4455 47 1 6.8414 6.7497 -5.3570 48 1 5.3800 5.4374 -3.6254 49 1 2.2140 2.3478 -1.9411 50 1 3.1166 0.7742 -1.8410 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:30:04 Heat of formation + Delta-G solvation = -70.705681 kcal Electronic energy + Delta-G solvation = -32993.146733 eV Core-core repulsion = 28341.625657 eV Total energy + Delta-G solvation = -4651.521076 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -43.73805 -41.18269 -40.94289 -40.03197 -39.13810 -37.46728 -37.18878 -35.28304 -34.05855 -32.81126 -31.90230 -31.32389 -29.55186 -27.87170 -27.35457 -26.77041 -26.08641 -24.61653 -23.73138 -23.27751 -22.31703 -21.99251 -21.28189 -20.45196 -19.39482 -19.17990 -18.28388 -17.86619 -17.32202 -17.21652 -16.98303 -16.84981 -16.69738 -16.55981 -16.36846 -16.24517 -16.04526 -15.88453 -15.65158 -15.42591 -15.14250 -14.64892 -14.49426 -14.24977 -14.18648 -14.16001 -13.91112 -13.62662 -13.53982 -13.50447 -13.34698 -13.06314 -12.94385 -12.56447 -12.19400 -12.06281 -12.02978 -11.97198 -11.79758 -11.51787 -11.51281 -10.97079 -10.95021 -10.50034 -10.48037 -10.11810 -9.93773 -9.85135 -9.11735 -4.89722 0.04658 0.39317 0.41127 0.92659 1.35910 1.49615 1.64065 2.01382 2.11773 2.20171 2.55072 2.75575 2.79635 3.29317 3.37670 3.46794 3.46967 3.62809 3.67199 3.70052 3.74243 3.75911 3.84952 3.94518 3.98183 4.00749 4.16865 4.18739 4.31652 4.36870 4.37188 4.42048 4.51843 4.54080 4.61209 4.62618 4.64880 4.73163 4.73802 4.75738 4.76671 4.80786 4.91555 5.04449 5.04894 5.09820 5.20253 5.25338 5.36539 5.41506 5.58723 5.78400 5.84749 6.22874 6.38280 6.45507 6.48275 7.19688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.377 6.377 3 C 0.060 3.940 4 H 0.088 0.912 5 C -0.126 4.126 6 C -0.125 4.125 7 H 0.099 0.901 8 C 0.133 3.867 9 N -0.720 5.720 10 C 0.588 3.412 11 O -0.533 6.533 12 C -0.209 4.209 13 C 0.064 3.936 14 C 0.136 3.864 15 O -0.304 6.304 16 C 0.143 3.857 17 C -0.202 4.202 18 C -0.076 4.076 19 C -0.157 4.157 20 C -0.069 4.069 21 O -0.531 6.531 22 Si 0.684 3.316 23 C -0.051 4.051 24 C -0.148 4.148 25 O -0.166 6.166 26 C -0.015 4.015 27 C -0.196 4.196 28 C -0.151 4.151 29 H 0.041 0.959 30 H 0.086 0.914 31 H 0.042 0.958 32 H 0.097 0.903 33 H 0.077 0.923 34 H 0.074 0.926 35 H 0.073 0.927 36 H 0.401 0.599 37 H 0.083 0.917 38 H 0.117 0.883 39 H 0.132 0.868 40 H 0.130 0.870 41 H 0.117 0.883 42 H 0.375 0.625 43 H -0.258 1.258 44 H -0.261 1.261 45 H 0.133 0.867 46 H 0.133 0.867 47 H 0.214 0.786 48 H 0.161 0.839 49 H 0.070 0.930 50 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.182 5.181 2.669 7.799 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.002 3.998 4 H 0.106 0.894 5 C -0.164 4.164 6 C -0.143 4.143 7 H 0.118 0.882 8 C 0.010 3.990 9 N -0.372 5.372 10 C 0.375 3.625 11 O -0.411 6.411 12 C -0.214 4.214 13 C 0.011 3.989 14 C 0.061 3.939 15 O -0.217 6.217 16 C 0.098 3.902 17 C -0.221 4.221 18 C -0.094 4.094 19 C -0.157 4.157 20 C -0.179 4.179 21 O -0.337 6.337 22 Si 0.586 3.414 23 C -0.069 4.069 24 C -0.167 4.167 25 O -0.061 6.061 26 C -0.082 4.082 27 C -0.215 4.215 28 C -0.189 4.189 29 H 0.060 0.940 30 H 0.105 0.895 31 H 0.061 0.939 32 H 0.115 0.885 33 H 0.096 0.904 34 H 0.092 0.908 35 H 0.092 0.908 36 H 0.236 0.764 37 H 0.101 0.899 38 H 0.134 0.866 39 H 0.150 0.850 40 H 0.147 0.853 41 H 0.135 0.865 42 H 0.223 0.777 43 H -0.183 1.183 44 H -0.186 1.186 45 H 0.151 0.849 46 H 0.151 0.849 47 H 0.231 0.769 48 H 0.179 0.821 49 H 0.089 0.911 50 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -3.830 4.069 2.807 6.253 hybrid contribution -0.628 1.452 -0.998 1.871 sum -4.458 5.521 1.808 7.323 Atomic orbital electron populations 1.22818 0.80937 1.03041 0.99967 1.87967 1.19845 1.27143 1.94546 1.23696 0.93913 0.85550 0.96653 0.89376 1.23210 0.95332 1.00237 0.97648 1.22568 0.93716 1.00071 0.97986 0.88238 1.21365 0.94428 0.91642 0.91577 1.45741 1.15162 1.32211 1.44092 1.17165 0.81897 0.83502 0.79928 1.90806 1.50351 1.37201 1.62705 1.21231 0.95050 1.00449 1.04671 1.21945 0.96183 0.88609 0.92181 1.21112 0.92710 0.85037 0.95033 1.86089 1.44412 1.34854 1.56388 1.18962 0.87007 0.89363 0.94883 1.21176 0.96085 1.02583 1.02228 1.20823 0.97911 0.93265 0.97360 1.20154 0.98364 0.97988 0.99210 1.24938 0.96437 1.01654 0.94912 1.86598 1.70981 1.38328 1.37819 0.94972 0.81244 0.79737 0.85492 1.20825 0.91651 0.97658 0.96796 1.20491 1.01178 0.94177 1.00862 1.83796 1.34912 1.34776 1.52583 1.24057 0.82243 1.00203 1.01655 1.22889 1.01374 0.96366 1.00915 1.23631 0.97058 1.01072 0.97120 0.93982 0.89503 0.93913 0.88498 0.90401 0.90763 0.90846 0.76448 0.89919 0.86553 0.85045 0.85311 0.86500 0.77735 1.18288 1.18628 0.84895 0.84907 0.76944 0.82115 0.91093 0.88760 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.59 10.71 -35.23 -0.38 -0.97 16 3 C 0.06 -0.05 4.31 -25.91 -0.11 -0.16 16 4 H 0.09 -0.19 7.87 -51.93 -0.41 -0.60 16 5 C -0.13 0.18 7.47 -25.92 -0.19 -0.01 16 6 C -0.12 0.29 3.75 -89.82 -0.34 -0.04 16 7 H 0.10 -0.36 8.14 -51.93 -0.42 -0.79 16 8 C 0.13 -0.06 5.51 -4.04 -0.02 -0.09 16 9 N -0.72 0.25 5.55 -61.40 -0.34 -0.09 16 10 C 0.59 1.58 7.81 -12.54 -0.10 1.49 16 11 O -0.53 -3.08 14.85 5.27 0.08 -3.00 16 12 C -0.21 -0.36 6.31 -103.27 -0.65 -1.01 16 13 C 0.06 0.14 7.00 -34.96 -0.24 -0.10 16 14 C 0.14 0.25 4.74 36.01 0.17 0.42 16 15 O -0.30 -1.19 10.12 -19.43 -0.20 -1.39 16 16 C 0.14 0.46 6.69 -39.22 -0.26 0.20 16 17 C -0.20 -0.35 9.04 -39.44 -0.36 -0.70 16 18 C -0.08 -0.08 8.66 -39.60 -0.34 -0.42 16 19 C -0.16 -0.22 5.35 -104.60 -0.56 -0.78 16 20 C -0.07 -0.05 2.80 36.00 0.10 0.05 16 21 O -0.53 -1.11 12.83 -35.23 -0.45 -1.56 16 22 Si 0.68 -0.05 29.88 -169.99 -5.08 -5.13 16 23 C -0.05 -0.10 9.68 -39.61 -0.38 -0.48 16 24 C -0.15 -0.40 9.99 -39.43 -0.39 -0.80 16 25 O -0.17 -0.23 10.52 7.67 0.08 -0.15 16 26 C -0.02 0.02 12.03 29.30 0.35 0.37 16 27 C -0.20 0.24 10.60 -37.45 -0.40 -0.16 16 28 C -0.15 0.22 7.46 -25.92 -0.19 0.03 16 29 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 32 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.07 0.07 7.84 -51.93 -0.41 -0.34 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.40 -1.16 7.64 -40.82 -0.31 -1.47 16 37 H 0.08 -0.03 7.65 -51.93 -0.40 -0.42 16 38 H 0.12 0.24 6.02 -51.93 -0.31 -0.08 16 39 H 0.13 -0.03 6.30 -52.49 -0.33 -0.36 16 40 H 0.13 -0.10 4.83 -52.49 -0.25 -0.35 16 41 H 0.12 0.01 7.96 -51.93 -0.41 -0.41 16 42 H 0.38 -0.26 8.70 45.56 0.40 0.14 16 43 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 44 H -0.26 -0.43 7.01 56.52 0.40 -0.04 16 45 H 0.13 0.11 8.06 -52.49 -0.42 -0.31 16 46 H 0.13 0.25 8.06 -52.48 -0.42 -0.17 16 47 H 0.21 -1.14 8.06 -52.49 -0.42 -1.57 16 48 H 0.16 -0.69 7.74 -52.49 -0.41 -1.09 16 49 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 50 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 LS Contribution 418.36 15.07 6.30 6.30 Total: 0.00 -9.47 418.36 -9.92 -19.39 By element: Atomic # 1 Polarization: -5.17 SS G_CDS: -7.11 Total: -12.27 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -2.83 Total: -1.13 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.34 Total: -0.09 kcal Atomic # 8 Polarization: -6.20 SS G_CDS: -0.87 Total: -7.07 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.08 Total: -5.13 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -9.47 -9.92 -19.39 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.312 kcal (2) G-P(sol) polarization free energy of solvation -9.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.393 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.706 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds