Wall clock time and date at job start Sat Mar 6 2021 18:30:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35989 * 117.00101 * 2 1 4 4 C 1.39158 * 120.07161 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07117 * 0.02562 * 4 3 2 6 6 C 1.42905 * 116.99762 * 179.72750 * 5 4 3 7 7 C 1.50699 * 109.46972 * 179.97438 * 6 5 4 8 8 O 1.21282 * 120.00041 * 359.97438 * 7 6 5 9 9 N 1.34779 * 120.00037 * 179.97438 * 7 6 5 10 10 C 1.46500 * 120.00169 * 179.97438 * 9 7 6 11 11 C 1.52996 * 109.46993 * 180.02562 * 10 9 7 12 12 H 1.09001 * 112.84957 * 43.80887 * 11 10 9 13 13 C 1.53778 * 113.61662 * 272.49751 * 11 10 9 14 14 C 1.53779 * 87.08082 * 220.02379 * 13 11 10 15 15 H 1.09010 * 113.61182 * 270.88077 * 14 13 11 16 16 O 1.42900 * 113.69075 * 139.99388 * 14 13 11 17 17 C 1.42896 * 113.99906 * 112.46365 * 16 14 13 18 18 C 1.53775 * 87.08361 * 25.43025 * 14 13 11 19 19 C 1.38564 * 119.85468 * 179.72924 * 4 3 2 20 20 C 1.38249 * 119.99882 * 0.27173 * 19 4 3 21 21 N 1.48002 * 119.92635 * 180.02562 * 20 19 4 22 22 O 1.21803 * 120.00239 * 0.02562 * 21 20 19 23 23 O 1.21801 * 119.99859 * 180.02562 * 21 20 19 24 24 C 1.38252 * 120.14299 * 0.02562 * 20 19 4 25 25 C 1.50705 * 119.92388 * 179.97438 * 24 20 19 26 26 O 1.42899 * 109.46745 * 74.99968 * 25 24 20 27 27 Si 1.86292 * 109.47107 * 194.99960 * 25 24 20 28 28 C 1.38239 * 120.14893 * 359.97438 * 24 20 19 29 29 H 1.08994 * 109.47500 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.46774 * 300.00110 * 1 2 3 31 31 H 1.08997 * 109.46907 * 59.99269 * 1 2 3 32 32 H 1.09004 * 109.47054 * 299.99753 * 6 5 4 33 33 H 1.09000 * 109.47187 * 59.99808 * 6 5 4 34 34 H 0.96996 * 119.99844 * 0.02562 * 9 7 6 35 35 H 1.09004 * 109.47042 * 300.00295 * 10 9 7 36 36 H 1.09004 * 109.46923 * 59.99881 * 10 9 7 37 37 H 1.09002 * 113.61062 * 334.56760 * 13 11 10 38 38 H 1.08994 * 113.61671 * 105.47018 * 13 11 10 39 39 H 1.08997 * 109.47601 * 60.00174 * 17 16 14 40 40 H 1.09004 * 109.47242 * 179.97438 * 17 16 14 41 41 H 1.09002 * 109.47323 * 299.99522 * 17 16 14 42 42 H 1.09009 * 113.61739 * 220.01890 * 18 14 13 43 43 H 1.09001 * 113.69466 * 89.12957 * 18 14 13 44 44 H 1.07997 * 120.00180 * 180.25589 * 19 4 3 45 45 H 1.09001 * 109.47255 * 315.00297 * 25 24 20 46 46 H 0.96709 * 114.00176 * 60.00477 * 26 25 24 47 47 H 1.48503 * 109.99938 * 58.68810 * 27 25 24 48 48 H 1.48506 * 109.99928 * 179.97438 * 27 25 24 49 49 H 1.07999 * 120.00021 * 180.02562 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1795 0.1475 -0.0016 6 6 5.6003 0.3004 -0.0081 7 6 6.2518 -1.0584 -0.0077 8 8 5.5669 -2.0593 -0.0019 9 7 7.5956 -1.1615 -0.0139 10 6 8.2290 -2.4826 -0.0129 11 6 9.7502 -2.3188 -0.0200 12 1 10.0964 -1.5508 0.6716 13 6 10.3499 -2.1958 -1.4307 14 6 11.5005 -3.0870 -0.9338 15 1 12.3263 -2.5284 -0.4931 16 8 11.9337 -4.0533 -1.8933 17 6 13.2515 -3.8232 -2.3956 18 6 10.5134 -3.6481 0.1032 19 6 4.0604 2.5232 -0.0062 20 6 3.3031 3.6798 -0.0056 21 7 3.9717 5.0001 -0.0123 22 8 5.1879 5.0670 -0.0187 23 8 3.3057 6.0200 -0.0113 24 6 1.9226 3.6056 0.0011 25 6 1.1018 4.8696 0.0023 26 8 1.1287 5.4561 -1.3005 27 14 -0.6570 4.4675 0.4661 28 6 1.2934 2.3748 0.0068 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5139 -0.8899 32 1 5.9027 0.8485 -0.9006 33 1 5.9105 0.8520 0.8794 34 1 8.1434 -0.3611 -0.0182 35 1 7.9270 -3.0296 0.8802 36 1 7.9184 -3.0350 -0.8997 37 1 9.7410 -2.6608 -2.2060 38 1 10.6611 -1.1829 -1.6861 39 1 13.9640 -3.8469 -1.5711 40 1 13.5059 -4.5993 -3.1175 41 1 13.2901 -2.8481 -2.8814 42 1 10.9566 -3.8077 1.0863 43 1 9.9486 -4.5103 -0.2514 44 1 5.1387 2.5838 -0.0108 45 1 1.5169 5.5717 0.7254 46 1 0.7734 4.8858 -1.9961 47 1 -0.6954 3.8279 1.8058 48 1 -1.4767 5.7058 0.4715 49 1 0.2148 2.3197 0.0116 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:30:07 Heat of formation + Delta-G solvation = -111.087048 kcal Electronic energy + Delta-G solvation = -35310.308425 eV Core-core repulsion = 30210.698267 eV Total energy + Delta-G solvation = -5099.610157 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -43.24137 -42.11766 -41.19495 -40.50181 -39.60720 -39.20463 -37.61231 -37.45945 -37.07425 -35.38236 -32.72067 -32.61110 -30.78413 -29.12958 -28.53659 -27.86841 -27.38573 -26.80186 -25.77051 -24.02875 -23.39376 -23.12076 -21.91913 -20.75827 -20.68014 -19.70282 -19.56978 -18.75833 -18.57221 -18.45905 -17.87891 -17.84126 -17.55765 -17.39277 -17.06050 -16.80503 -16.71229 -16.47455 -16.28466 -16.13443 -15.90388 -15.68052 -15.32496 -15.06842 -14.76390 -14.41495 -14.39361 -13.96390 -13.90210 -13.71371 -13.55471 -13.51658 -13.15043 -13.00907 -12.72920 -12.62238 -12.57404 -12.51030 -12.28531 -12.20489 -12.09160 -11.94905 -11.85796 -11.67644 -11.57596 -10.99839 -10.58671 -10.53479 -10.51793 -10.25293 -9.53678 -5.27764 -1.23035 -0.51445 0.31519 0.42780 1.02642 1.14318 1.39575 1.43956 1.71271 1.82380 1.86224 2.23717 2.75553 2.90113 3.07392 3.19596 3.28776 3.34416 3.39103 3.45115 3.52372 3.64164 3.65101 3.67772 3.70056 3.79704 3.85239 3.94368 3.94709 3.97310 4.12122 4.15884 4.24484 4.33703 4.38368 4.39814 4.53842 4.54828 4.58332 4.66511 4.68834 4.71154 4.73318 4.85517 4.98829 5.10830 5.26084 5.43647 5.47083 5.91840 6.19446 6.23509 6.43558 6.77787 6.99555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.171 3.829 4 C 0.109 3.891 5 O -0.264 6.264 6 C 0.031 3.969 7 C 0.517 3.483 8 O -0.508 6.508 9 N -0.725 5.725 10 C 0.134 3.866 11 C -0.125 4.125 12 H 0.101 0.899 13 C -0.152 4.152 14 C 0.060 3.940 15 H 0.089 0.911 16 O -0.377 6.377 17 C 0.029 3.971 18 C -0.127 4.127 19 C -0.118 4.118 20 C -0.025 4.025 21 N 0.032 4.968 22 O -0.174 6.174 23 O -0.130 6.130 24 C -0.043 4.043 25 C -0.074 4.074 26 O -0.515 6.515 27 Si 0.675 3.325 28 C -0.177 4.177 29 H 0.114 0.886 30 H 0.064 0.936 31 H 0.068 0.932 32 H 0.100 0.900 33 H 0.099 0.901 34 H 0.403 0.597 35 H 0.074 0.926 36 H 0.075 0.925 37 H 0.094 0.906 38 H 0.072 0.928 39 H 0.042 0.958 40 H 0.087 0.913 41 H 0.042 0.958 42 H 0.078 0.922 43 H 0.096 0.904 44 H 0.166 0.834 45 H 0.139 0.861 46 H 0.374 0.626 47 H -0.252 1.252 48 H -0.242 1.242 49 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.297 -2.494 -0.686 2.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.047 4.047 7 C 0.301 3.699 8 O -0.382 6.382 9 N -0.379 5.379 10 C 0.011 3.989 11 C -0.144 4.144 12 H 0.119 0.881 13 C -0.189 4.189 14 C 0.002 3.998 15 H 0.107 0.893 16 O -0.295 6.295 17 C -0.068 4.068 18 C -0.165 4.165 19 C -0.138 4.138 20 C -0.109 4.109 21 N 0.551 4.449 22 O -0.385 6.385 23 O -0.350 6.350 24 C -0.045 4.045 25 C -0.184 4.184 26 O -0.319 6.319 27 Si 0.574 3.426 28 C -0.196 4.196 29 H 0.132 0.868 30 H 0.083 0.917 31 H 0.086 0.914 32 H 0.118 0.882 33 H 0.117 0.883 34 H 0.238 0.762 35 H 0.093 0.907 36 H 0.093 0.907 37 H 0.112 0.888 38 H 0.090 0.910 39 H 0.061 0.939 40 H 0.105 0.895 41 H 0.061 0.939 42 H 0.096 0.904 43 H 0.115 0.885 44 H 0.184 0.816 45 H 0.156 0.844 46 H 0.220 0.780 47 H -0.176 1.176 48 H -0.166 1.166 49 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -0.989 -3.844 0.167 3.973 hybrid contribution 1.371 1.443 0.262 2.008 sum 0.382 -2.401 0.429 2.469 Atomic orbital electron populations 1.23420 0.76796 1.05792 1.02168 1.86347 1.22493 1.24212 1.86481 1.18449 0.89044 0.85901 0.94380 1.17858 0.88434 0.85343 1.02161 1.86340 1.16881 1.25999 1.88389 1.22665 0.80188 0.97277 1.04586 1.19828 0.82606 0.90144 0.77353 1.90815 1.62616 1.37846 1.46930 1.45793 1.05730 1.10158 1.76253 1.21394 0.90663 0.83694 1.03154 1.22578 0.93593 0.99614 0.98587 0.88080 1.23638 0.98070 1.00499 0.96721 1.23686 0.95234 0.90670 0.90216 0.89320 1.87962 1.32039 1.50614 1.58905 1.22820 0.83681 1.01551 0.98722 1.23214 0.96849 0.97210 0.99195 1.20803 1.02199 0.88969 1.01832 1.20398 0.91978 0.83131 1.15421 1.43382 1.00981 1.02622 0.97908 1.94540 0.95802 1.93725 1.54387 1.94576 1.64449 1.24078 1.51878 1.20097 0.91601 0.97053 0.95759 1.25468 1.08467 0.93281 0.91196 1.86713 1.86488 1.43427 1.15267 0.95573 0.76391 0.85246 0.85352 1.20897 1.00502 0.89595 1.08570 0.86760 0.91747 0.91355 0.88205 0.88273 0.76217 0.90746 0.90652 0.88768 0.90968 0.93892 0.89489 0.93936 0.90359 0.88505 0.81638 0.84414 0.77973 1.17649 1.16582 0.82021 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.08 10.28 -34.21 -0.35 -0.43 16 3 C 0.17 -0.01 6.70 -39.12 -0.26 -0.28 16 4 C 0.11 0.06 6.70 -39.12 -0.26 -0.20 16 5 O -0.26 -0.46 9.45 -47.35 -0.45 -0.91 16 6 C 0.03 -0.05 5.22 36.01 0.19 0.13 16 7 C 0.52 0.39 7.91 -10.99 -0.09 0.30 16 8 O -0.51 -2.98 16.50 -14.35 -0.24 -3.22 16 9 N -0.72 1.63 5.56 -60.29 -0.33 1.30 16 10 C 0.13 -0.20 5.51 -4.04 -0.02 -0.22 16 11 C -0.12 0.39 3.75 -89.81 -0.34 0.05 16 12 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 13 C -0.15 0.33 7.47 -25.92 -0.19 0.14 16 14 C 0.06 -0.07 4.31 -25.92 -0.11 -0.18 16 15 H 0.09 -0.22 7.87 -51.92 -0.41 -0.63 16 16 O -0.38 -0.47 10.72 -35.23 -0.38 -0.85 16 17 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 18 C -0.13 0.24 7.47 -25.92 -0.19 0.04 16 19 C -0.12 0.00 8.54 -39.46 -0.34 -0.33 16 20 C -0.03 -0.04 6.85 -79.95 -0.55 -0.59 16 21 N 0.03 0.14 4.45 33.96 0.15 0.29 16 22 O -0.17 -0.84 18.44 -29.46 -0.54 -1.39 16 23 O -0.13 -0.71 14.62 -35.96 -0.53 -1.23 16 24 C -0.04 0.01 5.26 -104.61 -0.55 -0.55 16 25 C -0.07 0.01 1.74 36.01 0.06 0.07 16 26 O -0.52 -0.20 11.80 -55.48 -0.65 -0.86 16 27 Si 0.67 -1.45 29.91 -169.99 -5.08 -6.54 16 28 C -0.18 0.34 7.65 -39.46 -0.30 0.03 16 29 H 0.11 -0.58 8.14 -51.93 -0.42 -1.00 16 30 H 0.06 -0.34 7.65 -51.93 -0.40 -0.74 16 31 H 0.07 -0.42 7.68 -51.93 -0.40 -0.82 16 32 H 0.10 -0.43 7.66 -51.93 -0.40 -0.82 16 33 H 0.10 -0.42 7.66 -51.93 -0.40 -0.82 16 34 H 0.40 -2.16 8.47 -40.82 -0.35 -2.51 16 35 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.08 -0.01 7.85 -51.93 -0.41 -0.42 16 37 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 38 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 39 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 40 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.08 -0.20 8.14 -51.92 -0.42 -0.62 16 43 H 0.10 -0.09 8.10 -51.93 -0.42 -0.51 16 44 H 0.17 -0.34 5.85 -52.49 -0.31 -0.64 16 45 H 0.14 0.23 6.07 -51.93 -0.32 -0.09 16 46 H 0.37 -1.55 8.70 45.56 0.40 -1.16 16 47 H -0.25 0.03 7.11 56.52 0.40 0.44 16 48 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 49 H 0.16 -0.80 3.36 -52.49 -0.18 -0.98 16 LS Contribution 411.62 15.07 6.20 6.20 Total: 0.00 -12.81 411.62 -9.63 -22.45 By element: Atomic # 1 Polarization: -8.69 SS G_CDS: -6.57 Total: -15.25 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -0.87 Total: 0.43 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -0.18 Total: 1.59 kcal Atomic # 8 Polarization: -5.74 SS G_CDS: -3.14 Total: -8.88 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.08 Total: -6.54 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -12.81 -9.63 -22.45 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.638 kcal (2) G-P(sol) polarization free energy of solvation -12.814 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.452 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.449 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.087 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds