Wall clock time and date at job start Sat Mar 6 2021 18:30:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42903 * 114.00008 * 2 1 4 4 H 1.09001 * 112.84617 * 341.20319 * 3 2 1 5 5 C 1.53954 * 113.73875 * 112.40324 * 3 2 1 6 6 C 1.53788 * 87.01839 * 139.94906 * 5 3 2 7 7 H 1.08996 * 113.61424 * 89.22701 * 6 5 3 8 8 C 1.52999 * 113.61494 * 220.04736 * 6 5 3 9 9 N 1.46497 * 109.46992 * 274.13509 * 8 6 5 10 10 C 1.34777 * 119.99525 * 179.97438 * 9 8 6 11 11 O 1.21283 * 120.00463 * 0.02562 * 10 9 8 12 12 C 1.50700 * 119.99675 * 179.72583 * 10 9 8 13 13 F 1.39903 * 109.47174 * 300.27796 * 12 10 9 14 14 F 1.39898 * 109.47270 * 60.27681 * 12 10 9 15 15 O 1.42899 * 109.47143 * 180.27800 * 12 10 9 16 16 C 1.35901 * 116.99988 * 179.97438 * 15 12 10 17 17 C 1.38728 * 120.05738 * 359.72926 * 16 15 12 18 18 C 1.38142 * 119.94278 * 179.73861 * 17 16 15 19 19 C 1.38266 * 120.05765 * 0.51226 * 18 17 16 20 20 C 1.50703 * 119.94581 * 179.74174 * 19 18 17 21 21 O 1.42890 * 109.47199 * 245.01957 * 20 19 18 22 22 Si 1.86305 * 109.47143 * 5.02313 * 20 19 18 23 23 C 1.38264 * 120.11077 * 359.76374 * 19 18 17 24 24 C 1.38139 * 120.05601 * 359.97438 * 23 19 18 25 25 C 1.53774 * 113.61958 * 210.00346 * 3 2 1 26 26 H 1.08994 * 109.47266 * 299.98902 * 1 2 3 27 27 H 1.09000 * 109.47455 * 60.00078 * 1 2 3 28 28 H 1.09006 * 109.46863 * 179.97438 * 1 2 3 29 29 H 1.08994 * 113.61532 * 25.42778 * 5 3 2 30 30 H 1.09002 * 113.66835 * 254.47066 * 5 3 2 31 31 H 1.08995 * 109.46838 * 154.13397 * 8 6 5 32 32 H 1.09001 * 109.46617 * 34.13732 * 8 6 5 33 33 H 0.97000 * 120.00580 * 0.02562 * 9 8 6 34 34 H 1.07998 * 120.02513 * 359.97438 * 17 16 15 35 35 H 1.08009 * 119.97422 * 180.22805 * 18 17 16 36 36 H 1.09008 * 109.46941 * 125.01856 * 20 19 18 37 37 H 0.96702 * 114.00156 * 60.00621 * 21 20 19 38 38 H 1.48497 * 110.00018 * 179.97438 * 22 20 19 39 39 H 1.48510 * 109.99702 * 301.31727 * 22 20 19 40 40 H 1.07997 * 119.97376 * 179.97438 * 23 19 18 41 41 H 1.08003 * 120.03344 * 179.97438 * 24 23 19 42 42 H 1.09003 * 113.61422 * 105.38483 * 25 3 2 43 43 H 1.09007 * 113.69278 * 334.49524 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3136 2.0789 -0.3237 5 6 2.7530 1.6532 1.3029 6 6 3.8220 2.3200 0.4210 7 1 3.6220 3.3708 0.2118 8 6 5.2537 2.0715 0.8998 9 7 5.6119 3.0718 1.9084 10 6 6.8341 3.0487 2.4760 11 8 7.6375 2.2001 2.1515 12 6 7.2047 4.0814 3.5090 13 9 7.1126 5.3586 2.9455 14 9 6.3303 3.9876 4.5969 15 8 8.5436 3.8521 3.9528 16 6 9.0366 4.7023 4.8914 17 6 8.2500 5.7394 5.3712 18 6 8.7516 6.5990 6.3293 19 6 10.0402 6.4328 6.8022 20 6 10.5869 7.3755 7.8431 21 8 11.6712 8.1218 7.2873 22 14 9.2432 8.5450 8.3888 23 6 10.8282 5.4034 6.3214 24 6 10.3294 4.5379 5.3673 25 6 3.3754 1.3721 -0.7045 26 1 -0.3633 0.5136 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 3.1164 0.7801 1.8447 30 1 2.2137 2.3539 1.9404 31 1 5.9376 2.1467 0.0545 32 1 5.3231 1.0748 1.3358 33 1 4.9692 3.7503 2.1682 34 1 7.2450 5.8723 4.9988 35 1 8.1383 7.4043 6.7059 36 1 10.9413 6.8037 8.7009 37 1 11.4281 8.6557 6.5186 38 1 9.7695 9.4796 9.4158 39 1 8.7295 9.3078 7.2227 40 1 11.8345 5.2759 6.6921 41 1 10.9454 3.7342 4.9917 42 1 3.3379 1.8460 -1.6854 43 1 3.9105 0.4224 -0.7135 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_4549640.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:30:14 Heat of formation + Delta-G solvation = -182.747205 kcal Electronic energy + Delta-G solvation = -29870.396053 eV Core-core repulsion = 25134.006774 eV Total energy + Delta-G solvation = -4736.389279 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.131 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -50.80580 -48.78173 -41.40998 -41.19444 -40.40373 -39.23825 -37.63334 -37.31745 -35.67583 -32.40836 -32.02466 -30.38307 -28.37214 -27.44252 -26.86525 -26.17568 -24.50922 -23.52245 -22.69047 -22.30103 -21.01340 -20.43329 -19.80152 -19.59897 -18.61391 -17.89902 -17.63565 -17.28350 -16.87813 -16.87183 -16.64075 -16.41340 -16.29715 -16.08705 -15.81368 -15.75677 -15.39228 -15.36443 -15.24567 -15.02700 -14.98476 -14.35553 -14.34187 -14.29951 -14.13913 -13.79677 -13.59895 -13.49872 -13.08714 -12.96987 -12.68058 -12.37983 -12.22547 -12.16198 -11.93930 -11.68986 -11.65470 -11.41800 -10.63327 -10.58585 -10.52201 -10.14378 -9.53371 -4.99525 0.08007 0.19695 0.52986 0.75290 1.24578 1.55319 1.77867 1.92932 2.05094 2.49755 2.70003 2.76492 3.26365 3.31872 3.34668 3.38507 3.54950 3.56277 3.62579 3.66621 3.74183 3.85603 4.04447 4.11607 4.22077 4.29555 4.37967 4.41277 4.43077 4.49443 4.55349 4.61919 4.64228 4.70310 4.75012 4.83547 4.83919 4.95260 4.97184 5.09134 5.13553 5.37759 5.41890 5.77930 5.89959 6.16559 6.37186 6.42923 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.061 3.939 4 H 0.090 0.910 5 C -0.153 4.153 6 C -0.127 4.127 7 H 0.103 0.897 8 C 0.131 3.869 9 N -0.702 5.702 10 C 0.514 3.486 11 O -0.468 6.468 12 C 0.432 3.568 13 F -0.175 7.175 14 F -0.174 7.174 15 O -0.286 6.286 16 C 0.108 3.892 17 C -0.187 4.187 18 C -0.079 4.079 19 C -0.141 4.141 20 C -0.072 4.072 21 O -0.529 6.529 22 Si 0.684 3.316 23 C -0.055 4.055 24 C -0.126 4.126 25 C -0.125 4.125 26 H 0.042 0.958 27 H 0.043 0.957 28 H 0.087 0.913 29 H 0.095 0.905 30 H 0.073 0.927 31 H 0.082 0.918 32 H 0.083 0.917 33 H 0.410 0.590 34 H 0.136 0.864 35 H 0.134 0.866 36 H 0.120 0.880 37 H 0.376 0.624 38 H -0.256 1.256 39 H -0.260 1.260 40 H 0.140 0.860 41 H 0.141 0.859 42 H 0.079 0.921 43 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.208 1.023 -0.703 6.331 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.295 6.295 3 C 0.003 3.997 4 H 0.107 0.893 5 C -0.191 4.191 6 C -0.146 4.146 7 H 0.122 0.878 8 C 0.009 3.991 9 N -0.356 5.356 10 C 0.292 3.708 11 O -0.338 6.338 12 C 0.354 3.646 13 F -0.157 7.157 14 F -0.156 7.156 15 O -0.202 6.202 16 C 0.064 3.936 17 C -0.205 4.205 18 C -0.096 4.096 19 C -0.141 4.141 20 C -0.181 4.181 21 O -0.335 6.335 22 Si 0.585 3.415 23 C -0.073 4.073 24 C -0.145 4.145 25 C -0.163 4.163 26 H 0.061 0.939 27 H 0.061 0.939 28 H 0.105 0.895 29 H 0.114 0.886 30 H 0.092 0.908 31 H 0.101 0.899 32 H 0.101 0.899 33 H 0.246 0.754 34 H 0.153 0.847 35 H 0.152 0.848 36 H 0.138 0.862 37 H 0.224 0.776 38 H -0.180 1.180 39 H -0.185 1.185 40 H 0.157 0.843 41 H 0.159 0.841 42 H 0.098 0.902 43 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -5.372 0.624 -0.489 5.431 hybrid contribution -0.188 1.273 -0.684 1.457 sum -5.560 1.896 -1.173 5.991 Atomic orbital electron populations 1.22824 0.80822 1.03105 1.00030 1.87962 1.19942 1.27037 1.94523 1.23699 0.93919 0.85672 0.96453 0.89260 1.23691 0.97016 1.01130 0.97241 1.22601 0.93053 1.00553 0.98348 0.87843 1.21601 0.95437 0.91544 0.90546 1.45799 1.13764 1.34203 1.41824 1.19297 0.83938 0.85172 0.82406 1.90886 1.48662 1.34960 1.59332 1.21842 0.79147 0.81141 0.82462 1.93190 1.95669 1.41826 1.85007 1.93194 1.69767 1.95902 1.56695 1.86675 1.25916 1.52425 1.55201 1.18995 0.94250 0.90255 0.90051 1.21464 1.00942 0.96805 1.01322 1.20849 0.94847 0.98479 0.95456 1.20304 0.94682 0.98663 1.00460 1.24983 0.97955 0.97950 0.97257 1.86608 1.34421 1.62669 1.49830 0.94997 0.82429 0.81712 0.82355 1.20900 0.99778 0.92330 0.94317 1.20545 0.92734 1.02055 0.99153 1.23204 0.95382 1.00105 0.97614 0.93914 0.93872 0.89459 0.88634 0.90819 0.89934 0.89878 0.75448 0.84654 0.84829 0.86204 0.77600 1.18047 1.18491 0.84259 0.84115 0.90193 0.88386 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.05 16 2 O -0.38 -0.30 10.72 -35.23 -0.38 -0.68 16 3 C 0.06 -0.10 4.31 -25.83 -0.11 -0.22 16 4 H 0.09 -0.26 7.87 -51.93 -0.41 -0.67 16 5 C -0.15 0.40 7.48 -25.82 -0.19 0.21 16 6 C -0.13 0.45 3.75 -89.80 -0.34 0.12 16 7 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 8 C 0.13 -0.27 5.50 -4.04 -0.02 -0.29 16 9 N -0.70 1.15 5.56 -60.30 -0.33 0.82 16 10 C 0.51 0.89 7.34 -10.98 -0.08 0.81 16 11 O -0.47 -2.44 16.50 -14.36 -0.24 -2.67 16 12 C 0.43 0.72 2.05 36.01 0.07 0.79 16 13 F -0.18 -0.18 15.27 2.25 0.03 -0.14 16 14 F -0.17 -0.15 15.31 2.25 0.03 -0.12 16 15 O -0.29 -1.04 9.60 -39.34 -0.38 -1.41 16 16 C 0.11 0.29 6.48 -39.21 -0.25 0.03 16 17 C -0.19 -0.27 8.26 -39.44 -0.33 -0.60 16 18 C -0.08 -0.02 8.66 -39.61 -0.34 -0.36 16 19 C -0.14 -0.04 5.35 -104.60 -0.56 -0.60 16 20 C -0.07 0.03 2.80 36.01 0.10 0.13 16 21 O -0.53 -0.58 12.83 -35.23 -0.45 -1.03 16 22 Si 0.68 -0.71 29.88 -169.99 -5.08 -5.79 16 23 C -0.06 -0.04 9.68 -39.61 -0.38 -0.42 16 24 C -0.13 -0.20 9.99 -39.43 -0.39 -0.59 16 25 C -0.13 0.31 7.48 -25.92 -0.19 0.12 16 26 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 27 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.10 -0.14 7.92 -51.93 -0.41 -0.55 16 30 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.08 -0.10 7.87 -51.93 -0.41 -0.51 16 33 H 0.41 -1.67 8.47 -40.82 -0.35 -2.01 16 34 H 0.14 0.08 5.10 -52.49 -0.27 -0.19 16 35 H 0.13 -0.21 4.83 -52.48 -0.25 -0.47 16 36 H 0.12 -0.15 7.96 -51.92 -0.41 -0.56 16 37 H 0.38 -0.61 8.70 45.56 0.40 -0.21 16 38 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 39 H -0.26 -0.21 7.01 56.52 0.40 0.19 16 40 H 0.14 -0.09 8.06 -52.49 -0.42 -0.51 16 41 H 0.14 0.07 8.06 -52.48 -0.42 -0.35 16 42 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 43 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 LS Contribution 369.69 15.07 5.57 5.57 Total: 0.00 -7.68 369.69 -8.69 -16.36 By element: Atomic # 1 Polarization: -5.53 SS G_CDS: -5.54 Total: -11.07 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -1.93 Total: 0.17 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -0.33 Total: 0.82 kcal Atomic # 8 Polarization: -4.35 SS G_CDS: -1.44 Total: -5.80 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.07 Total: -0.26 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.08 Total: -5.79 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -7.68 -8.69 -16.36 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_4549640.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.385 kcal (2) G-P(sol) polarization free energy of solvation -7.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -174.060 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.687 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.362 kcal (6) G-S(sol) free energy of system = (1) + (5) -182.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds