Wall clock time and date at job start Sat Mar 6 2021 18:30:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42903 * 114.00008 * 2 1 4 4 H 1.09001 * 112.84617 * 341.20319 * 3 2 1 5 5 C 1.53954 * 113.73875 * 112.40324 * 3 2 1 6 6 C 1.53788 * 87.01839 * 139.94906 * 5 3 2 7 7 H 1.08996 * 113.61424 * 89.22701 * 6 5 3 8 8 C 1.52999 * 113.61494 * 220.04736 * 6 5 3 9 9 N 1.46497 * 109.46992 * 274.13509 * 8 6 5 10 10 C 1.34777 * 119.99525 * 179.97438 * 9 8 6 11 11 O 1.21283 * 120.00463 * 0.02562 * 10 9 8 12 12 C 1.50700 * 119.99675 * 179.72583 * 10 9 8 13 13 F 1.39903 * 109.47174 * 300.27796 * 12 10 9 14 14 F 1.39898 * 109.47270 * 60.27681 * 12 10 9 15 15 O 1.42899 * 109.47143 * 180.27800 * 12 10 9 16 16 C 1.35901 * 116.99988 * 179.97438 * 15 12 10 17 17 C 1.38728 * 120.05738 * 359.72926 * 16 15 12 18 18 C 1.38142 * 119.94278 * 179.73861 * 17 16 15 19 19 C 1.38266 * 120.05765 * 0.51226 * 18 17 16 20 20 C 1.50703 * 119.94581 * 179.74174 * 19 18 17 21 21 O 1.42890 * 109.47199 * 245.01957 * 20 19 18 22 22 Si 1.86305 * 109.47143 * 5.02313 * 20 19 18 23 23 C 1.38264 * 120.11077 * 359.76374 * 19 18 17 24 24 C 1.38139 * 120.05601 * 359.97438 * 23 19 18 25 25 C 1.53774 * 113.61958 * 210.00346 * 3 2 1 26 26 H 1.08994 * 109.47266 * 299.98902 * 1 2 3 27 27 H 1.09000 * 109.47455 * 60.00078 * 1 2 3 28 28 H 1.09006 * 109.46863 * 179.97438 * 1 2 3 29 29 H 1.08994 * 113.61532 * 25.42778 * 5 3 2 30 30 H 1.09002 * 113.66835 * 254.47066 * 5 3 2 31 31 H 1.08995 * 109.46838 * 154.13397 * 8 6 5 32 32 H 1.09001 * 109.46617 * 34.13732 * 8 6 5 33 33 H 0.97000 * 120.00580 * 0.02562 * 9 8 6 34 34 H 1.07998 * 120.02513 * 359.97438 * 17 16 15 35 35 H 1.08009 * 119.97422 * 180.22805 * 18 17 16 36 36 H 1.09008 * 109.46941 * 125.01856 * 20 19 18 37 37 H 0.96702 * 114.00156 * 60.00621 * 21 20 19 38 38 H 1.48497 * 110.00018 * 179.97438 * 22 20 19 39 39 H 1.48510 * 109.99702 * 301.31727 * 22 20 19 40 40 H 1.07997 * 119.97376 * 179.97438 * 23 19 18 41 41 H 1.08003 * 120.03344 * 179.97438 * 24 23 19 42 42 H 1.09003 * 113.61422 * 105.38483 * 25 3 2 43 43 H 1.09007 * 113.69278 * 334.49524 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3136 2.0789 -0.3237 5 6 2.7530 1.6532 1.3029 6 6 3.8220 2.3200 0.4210 7 1 3.6220 3.3708 0.2118 8 6 5.2537 2.0715 0.8998 9 7 5.6119 3.0718 1.9084 10 6 6.8341 3.0487 2.4760 11 8 7.6375 2.2001 2.1515 12 6 7.2047 4.0814 3.5090 13 9 7.1126 5.3586 2.9455 14 9 6.3303 3.9876 4.5969 15 8 8.5436 3.8521 3.9528 16 6 9.0366 4.7023 4.8914 17 6 8.2500 5.7394 5.3712 18 6 8.7516 6.5990 6.3293 19 6 10.0402 6.4328 6.8022 20 6 10.5869 7.3755 7.8431 21 8 11.6712 8.1218 7.2873 22 14 9.2432 8.5450 8.3888 23 6 10.8282 5.4034 6.3214 24 6 10.3294 4.5379 5.3673 25 6 3.3754 1.3721 -0.7045 26 1 -0.3633 0.5136 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 3.1164 0.7801 1.8447 30 1 2.2137 2.3539 1.9404 31 1 5.9376 2.1467 0.0545 32 1 5.3231 1.0748 1.3358 33 1 4.9692 3.7503 2.1682 34 1 7.2450 5.8723 4.9988 35 1 8.1383 7.4043 6.7059 36 1 10.9413 6.8037 8.7009 37 1 11.4281 8.6557 6.5186 38 1 9.7695 9.4796 9.4158 39 1 8.7295 9.3078 7.2227 40 1 11.8345 5.2759 6.6921 41 1 10.9454 3.7342 4.9917 42 1 3.3379 1.8460 -1.6854 43 1 3.9105 0.4224 -0.7135 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12345242_4549640.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:30:13 Heat of formation + Delta-G solvation = -181.545205 kcal Electronic energy + Delta-G solvation = -29870.343931 eV Core-core repulsion = 25134.006774 eV Total energy + Delta-G solvation = -4736.337157 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.131 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -50.90390 -48.87188 -41.48865 -41.22016 -40.34239 -39.31621 -37.57910 -37.35550 -35.69097 -32.46070 -32.07672 -30.37925 -28.34057 -27.33988 -26.67721 -26.19186 -24.54297 -23.41613 -22.73043 -22.37415 -20.92087 -20.47202 -19.81734 -19.70417 -18.64303 -17.79966 -17.71952 -17.34671 -16.89180 -16.77722 -16.61297 -16.37730 -16.29783 -16.04237 -15.85736 -15.79993 -15.42918 -15.39841 -15.29875 -15.11765 -15.01206 -14.40983 -14.39787 -14.29150 -14.22721 -13.64565 -13.55744 -13.41943 -13.03873 -12.93074 -12.48615 -12.43461 -12.25365 -12.06985 -11.79805 -11.70874 -11.52521 -11.42891 -10.63660 -10.56083 -10.40818 -10.19192 -9.61436 -4.92779 0.00742 0.15021 0.45739 0.62625 1.29618 1.58406 1.66714 1.94783 1.98685 2.44301 2.74620 2.88791 3.21687 3.39932 3.46307 3.53208 3.57557 3.64741 3.71052 3.77289 3.82257 4.06523 4.09173 4.19661 4.25495 4.38907 4.45412 4.55264 4.56832 4.58859 4.65057 4.80087 4.82453 4.82971 4.83875 4.87586 4.90144 5.03675 5.04009 5.15248 5.33637 5.34718 5.37745 5.79587 5.84558 6.32087 6.44215 6.47462 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.405 6.405 3 C 0.052 3.948 4 H 0.105 0.895 5 C -0.152 4.152 6 C -0.110 4.110 7 H 0.126 0.874 8 C 0.129 3.871 9 N -0.682 5.682 10 C 0.514 3.486 11 O -0.511 6.511 12 C 0.435 3.565 13 F -0.171 7.171 14 F -0.169 7.169 15 O -0.306 6.306 16 C 0.086 3.914 17 C -0.193 4.193 18 C -0.079 4.079 19 C -0.138 4.138 20 C -0.078 4.078 21 O -0.547 6.547 22 Si 0.763 3.237 23 C -0.057 4.057 24 C -0.137 4.137 25 C -0.128 4.128 26 H 0.049 0.951 27 H 0.051 0.949 28 H 0.087 0.913 29 H 0.080 0.920 30 H 0.086 0.914 31 H 0.081 0.919 32 H 0.072 0.928 33 H 0.424 0.576 34 H 0.142 0.858 35 H 0.153 0.847 36 H 0.130 0.870 37 H 0.386 0.614 38 H -0.301 1.301 39 H -0.281 1.281 40 H 0.151 0.849 41 H 0.144 0.856 42 H 0.089 0.911 43 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.138 2.098 -0.552 7.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.324 6.324 3 C -0.006 4.006 4 H 0.123 0.877 5 C -0.190 4.190 6 C -0.128 4.128 7 H 0.144 0.856 8 C 0.008 3.992 9 N -0.335 5.335 10 C 0.292 3.708 11 O -0.385 6.385 12 C 0.358 3.642 13 F -0.153 7.153 14 F -0.151 7.151 15 O -0.223 6.223 16 C 0.043 3.957 17 C -0.212 4.212 18 C -0.096 4.096 19 C -0.139 4.139 20 C -0.187 4.187 21 O -0.355 6.355 22 Si 0.668 3.332 23 C -0.075 4.075 24 C -0.155 4.155 25 C -0.166 4.166 26 H 0.068 0.932 27 H 0.070 0.930 28 H 0.106 0.894 29 H 0.098 0.902 30 H 0.105 0.895 31 H 0.099 0.901 32 H 0.091 0.909 33 H 0.262 0.738 34 H 0.160 0.840 35 H 0.170 0.830 36 H 0.148 0.852 37 H 0.236 0.764 38 H -0.230 1.230 39 H -0.207 1.207 40 H 0.168 0.832 41 H 0.162 0.838 42 H 0.108 0.892 43 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -6.345 1.702 -0.351 6.579 hybrid contribution 0.093 0.973 -0.719 1.214 sum -6.252 2.675 -1.070 6.884 Atomic orbital electron populations 1.22926 0.79990 1.03481 1.00782 1.87923 1.21092 1.28662 1.94727 1.23925 0.94344 0.85215 0.97087 0.87743 1.23656 0.97267 1.00922 0.97166 1.22541 0.91455 1.01488 0.97348 0.85586 1.21654 0.96470 0.90939 0.90179 1.45757 1.12848 1.34114 1.40798 1.19412 0.84383 0.84713 0.82334 1.90864 1.50063 1.36653 1.60893 1.21747 0.78762 0.81237 0.82495 1.93194 1.95620 1.41509 1.84940 1.93198 1.69489 1.95902 1.56488 1.86649 1.26834 1.53105 1.55678 1.19260 0.94944 0.90899 0.90594 1.21601 1.01211 0.96724 1.01629 1.21060 0.95043 0.98570 0.94931 1.20413 0.94671 0.98478 1.00335 1.25184 0.98086 0.98156 0.97270 1.86582 1.35359 1.63038 1.50530 0.94089 0.80813 0.79373 0.78909 1.21070 1.00341 0.92143 0.93955 1.20713 0.92700 1.02541 0.99541 1.23214 0.95046 0.99901 0.98431 0.93208 0.93018 0.89403 0.90180 0.89548 0.90121 0.90927 0.73766 0.84044 0.82983 0.85211 0.76440 1.22957 1.20710 0.83167 0.83790 0.89242 0.89689 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 10.85 113.37 1.23 1.16 16 2 O -0.40 -0.83 10.72 -148.98 -1.60 -2.43 16 3 C 0.05 -0.19 4.31 31.18 0.13 -0.06 16 4 H 0.10 -0.74 7.87 -2.39 -0.02 -0.76 16 5 C -0.15 0.86 7.48 31.18 0.23 1.09 16 6 C -0.11 0.87 3.75 -10.27 -0.04 0.83 16 7 H 0.13 -1.51 8.14 -2.39 -0.02 -1.53 16 8 C 0.13 -0.51 5.50 86.38 0.47 -0.04 16 9 N -0.68 2.32 5.56 -463.07 -2.57 -0.25 16 10 C 0.51 2.18 7.34 87.66 0.64 2.82 16 11 O -0.51 -6.18 16.50 16.00 0.26 -5.92 16 12 C 0.44 1.68 2.05 71.24 0.15 1.82 16 13 F -0.17 -0.34 15.27 44.97 0.69 0.35 16 14 F -0.17 -0.31 15.31 44.97 0.69 0.38 16 15 O -0.31 -2.59 9.60 -73.40 -0.70 -3.29 16 16 C 0.09 0.52 6.48 22.51 0.15 0.66 16 17 C -0.19 -0.55 8.26 22.36 0.18 -0.36 16 18 C -0.08 0.02 8.66 22.25 0.19 0.21 16 19 C -0.14 0.00 5.35 -19.85 -0.11 -0.10 16 20 C -0.08 0.12 2.80 71.24 0.20 0.32 16 21 O -0.55 -0.92 12.83 -148.98 -1.91 -2.83 16 22 Si 0.76 -2.10 29.88 68.60 2.05 -0.05 16 23 C -0.06 -0.07 9.68 22.25 0.22 0.15 16 24 C -0.14 -0.53 9.99 22.37 0.22 -0.31 16 25 C -0.13 0.66 7.48 31.12 0.23 0.89 16 26 H 0.05 -0.23 8.14 -2.39 -0.02 -0.25 16 27 H 0.05 -0.25 8.14 -2.39 -0.02 -0.27 16 28 H 0.09 -0.31 8.14 -2.38 -0.02 -0.33 16 29 H 0.08 -0.18 7.92 -2.39 -0.02 -0.19 16 30 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 31 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 32 H 0.07 -0.09 7.87 -2.39 -0.02 -0.11 16 33 H 0.42 -3.89 8.47 -92.71 -0.79 -4.68 16 34 H 0.14 0.12 5.10 -2.91 -0.01 0.11 16 35 H 0.15 -0.69 4.83 -2.91 -0.01 -0.71 16 36 H 0.13 -0.46 7.96 -2.38 -0.02 -0.48 16 37 H 0.39 -1.41 8.70 -74.06 -0.64 -2.06 16 38 H -0.30 -1.52 7.11 99.48 0.71 -0.82 16 39 H -0.28 -0.19 7.01 99.48 0.70 0.50 16 40 H 0.15 -0.23 8.06 -2.91 -0.02 -0.25 16 41 H 0.14 0.32 8.06 -2.91 -0.02 0.30 16 42 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 43 H 0.08 -0.20 8.10 -2.38 -0.02 -0.22 16 Total: 0.00 -19.00 369.69 0.68 -18.32 By element: Atomic # 1 Polarization: -13.03 SS G_CDS: -0.33 Total: -13.37 kcal Atomic # 6 Polarization: 4.98 SS G_CDS: 4.11 Total: 9.09 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -2.57 Total: -0.25 kcal Atomic # 8 Polarization: -10.52 SS G_CDS: -3.95 Total: -14.47 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 1.38 Total: 0.73 kcal Atomic # 14 Polarization: -2.10 SS G_CDS: 2.05 Total: -0.05 kcal Total: -19.00 0.68 -18.32 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_4549640.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -163.222 kcal (2) G-P(sol) polarization free energy of solvation -19.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -181.545 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds