Wall clock time and date at job start Sat Mar 6 2021 18:30:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42909 * 1 3 3 C 1.35983 * 116.99426 * 2 1 4 4 C 1.38678 * 119.99432 * 179.97438 * 3 2 1 5 5 C 1.38155 * 119.99825 * 180.02562 * 4 3 2 6 6 C 1.50700 * 120.00209 * 180.02562 * 5 4 3 7 7 O 1.42901 * 109.47345 * 254.97718 * 6 5 4 8 8 Si 1.86304 * 109.46811 * 14.97609 * 6 5 4 9 9 C 1.38679 * 120.00242 * 359.97438 * 5 4 3 10 10 O 1.35976 * 120.00284 * 179.97438 * 9 5 4 11 11 C 1.42897 * 117.00220 * 179.97438 * 10 9 5 12 12 C 1.50702 * 109.47405 * 180.02562 * 11 10 9 13 13 O 1.21276 * 119.99549 * 0.02562 * 12 11 10 14 14 N 1.34772 * 119.99768 * 180.02562 * 12 11 10 15 15 C 1.46505 * 119.99813 * 180.02562 * 14 12 11 16 16 C 1.52995 * 109.47283 * 180.02562 * 15 14 12 17 17 H 1.08999 * 112.84933 * 316.19853 * 16 15 14 18 18 C 1.53781 * 113.61503 * 185.00012 * 16 15 14 19 19 C 1.53786 * 87.17350 * 219.89414 * 18 16 15 20 20 H 1.09000 * 113.60973 * 270.92699 * 19 18 16 21 21 O 1.42891 * 113.61586 * 140.02292 * 19 18 16 22 22 C 1.42903 * 114.00062 * 149.99622 * 21 19 18 23 23 C 1.53781 * 113.69221 * 87.46423 * 16 15 14 24 24 C 1.38723 * 119.99727 * 0.27802 * 9 5 4 25 25 C 1.38115 * 119.99674 * 359.44720 * 24 9 5 26 26 H 1.09000 * 109.47056 * 60.00567 * 1 2 3 27 27 H 1.08998 * 109.46936 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.46848 * 300.00124 * 1 2 3 29 29 H 1.07994 * 120.00209 * 0.04294 * 4 3 2 30 30 H 1.09000 * 109.47738 * 134.97326 * 6 5 4 31 31 H 0.96694 * 114.00127 * 300.00139 * 7 6 5 32 32 H 1.48501 * 110.00187 * 60.00587 * 8 6 5 33 33 H 1.48504 * 109.99915 * 181.31749 * 8 6 5 34 34 H 1.09000 * 109.46825 * 60.00088 * 11 10 9 35 35 H 1.08996 * 109.47449 * 300.00915 * 11 10 9 36 36 H 0.97001 * 120.00396 * 0.02562 * 14 12 11 37 37 H 1.09000 * 109.47315 * 59.99868 * 15 14 12 38 38 H 1.09001 * 109.46863 * 300.00267 * 15 14 12 39 39 H 1.09002 * 113.61445 * 334.48413 * 18 16 15 40 40 H 1.09002 * 113.61408 * 105.30144 * 18 16 15 41 41 H 1.09003 * 109.46699 * 60.00030 * 22 21 19 42 42 H 1.09002 * 109.47245 * 180.02562 * 22 21 19 43 43 H 1.08998 * 109.47037 * 300.00188 * 22 21 19 44 44 H 1.09005 * 113.61471 * 254.54353 * 23 16 15 45 45 H 1.09003 * 113.61469 * 25.44131 * 23 16 15 46 46 H 1.07990 * 119.99902 * 179.70400 * 24 9 5 47 47 H 1.07998 * 119.99688 * 180.25545 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 0.0005 5 6 4.0584 2.5152 0.0011 6 6 5.5633 2.5942 0.0011 7 8 6.0208 2.9673 1.3025 8 14 6.2723 0.9324 -0.4536 9 6 3.3031 3.6783 0.0005 10 8 3.9204 4.8899 0.0016 11 6 3.0804 6.0460 0.0004 12 6 3.9346 7.2875 0.0012 13 8 5.1435 7.1918 0.0022 14 7 3.3549 8.5042 0.0008 15 6 4.1852 9.7112 0.0010 16 6 3.2859 10.9490 0.0011 17 1 2.4506 10.8653 -0.6942 18 6 4.0594 12.2724 -0.1215 19 6 3.0755 12.8546 0.9071 20 1 2.1828 13.2910 0.4590 21 8 3.6930 13.7142 1.8671 22 6 2.8357 14.7458 2.3601 23 6 2.8722 11.4121 1.4080 24 6 1.9178 3.6057 0.0053 25 6 1.2908 2.3750 -0.0010 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 4.0194 0.3786 0.0003 30 1 5.8882 3.3389 -0.7256 31 1 5.6901 3.8242 1.6049 32 1 5.8041 0.5330 -1.8051 33 1 7.7560 0.9885 -0.4262 34 1 2.4498 6.0378 0.8894 35 1 2.4524 6.0379 -0.8904 36 1 2.3879 8.5808 0.0004 37 1 4.8149 9.7193 -0.8887 38 1 4.8141 9.7194 0.8912 39 1 5.0857 12.2135 0.2408 40 1 3.9840 12.7325 -1.1068 41 1 1.9671 14.2969 2.8419 42 1 3.3785 15.3548 3.0830 43 1 2.5077 15.3727 1.5309 44 1 1.8373 11.1783 1.6579 45 1 3.5740 11.1179 2.1885 46 1 1.3296 4.5113 0.0097 47 1 0.2123 2.3185 -0.0014 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:30:24 Heat of formation + Delta-G solvation = -126.394396 kcal Electronic energy + Delta-G solvation = -28794.531368 eV Core-core repulsion = 24525.273870 eV Total energy + Delta-G solvation = -4269.257498 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.82838 -41.09510 -40.44488 -39.72918 -38.03612 -37.48152 -36.81991 -35.35950 -32.78388 -31.35408 -30.25757 -28.57055 -28.04172 -27.33926 -26.79499 -26.48223 -23.95915 -23.20448 -22.38654 -21.81515 -20.68368 -19.52661 -18.80449 -18.69657 -17.94349 -17.67909 -17.58448 -17.34279 -16.88248 -16.75500 -16.67450 -16.29177 -16.01817 -15.86635 -15.69026 -15.38268 -15.23022 -14.98660 -14.39207 -14.30499 -14.13029 -13.90096 -13.71127 -13.61998 -13.56445 -13.44229 -13.07617 -13.01431 -12.65571 -12.60419 -12.25260 -12.10172 -11.86714 -11.85422 -11.58997 -11.51498 -11.14023 -10.99356 -10.89338 -10.52740 -10.23487 -10.06480 -8.81438 -4.73253 0.08174 0.35557 1.37989 1.44540 1.54938 1.80021 2.15734 2.26104 2.48874 2.56905 2.74760 3.27471 3.37196 3.48420 3.56124 3.63028 3.64613 3.67769 3.75266 3.81970 3.93642 3.96807 4.08647 4.10729 4.12536 4.13563 4.17654 4.32305 4.34455 4.38098 4.44588 4.53693 4.54395 4.57021 4.65569 4.67795 4.70400 4.72895 4.84398 4.97935 5.03565 5.10650 5.11855 5.19115 5.27458 5.41125 6.07015 6.18244 6.27670 6.39055 6.75925 7.03649 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.314 6.314 3 C 0.103 3.897 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.100 3.900 10 O -0.290 6.290 11 C 0.042 3.958 12 C 0.514 3.486 13 O -0.511 6.511 14 N -0.726 5.726 15 C 0.134 3.866 16 C -0.125 4.125 17 H 0.100 0.900 18 C -0.127 4.127 19 C 0.060 3.940 20 H 0.089 0.911 21 O -0.376 6.376 22 C 0.029 3.971 23 C -0.151 4.151 24 C -0.165 4.165 25 C -0.165 4.165 26 H 0.055 0.945 27 H 0.103 0.897 28 H 0.056 0.944 29 H 0.147 0.853 30 H 0.078 0.922 31 H 0.368 0.632 32 H -0.251 1.251 33 H -0.254 1.254 34 H 0.094 0.906 35 H 0.093 0.907 36 H 0.402 0.598 37 H 0.074 0.926 38 H 0.075 0.925 39 H 0.097 0.903 40 H 0.078 0.922 41 H 0.042 0.958 42 H 0.087 0.913 43 H 0.042 0.958 44 H 0.071 0.929 45 H 0.094 0.906 46 H 0.133 0.867 47 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.361 2.576 -0.141 9.710 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.100 4.100 6 C -0.181 4.181 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.055 3.945 10 O -0.203 6.203 11 C -0.037 4.037 12 C 0.299 3.701 13 O -0.385 6.385 14 N -0.381 5.381 15 C 0.011 3.989 16 C -0.143 4.143 17 H 0.118 0.882 18 C -0.165 4.165 19 C 0.002 3.998 20 H 0.107 0.893 21 O -0.295 6.295 22 C -0.068 4.068 23 C -0.189 4.189 24 C -0.184 4.184 25 C -0.184 4.184 26 H 0.074 0.926 27 H 0.121 0.879 28 H 0.075 0.925 29 H 0.164 0.836 30 H 0.096 0.904 31 H 0.216 0.784 32 H -0.175 1.175 33 H -0.179 1.179 34 H 0.112 0.888 35 H 0.111 0.889 36 H 0.236 0.764 37 H 0.092 0.908 38 H 0.093 0.907 39 H 0.115 0.885 40 H 0.096 0.904 41 H 0.060 0.940 42 H 0.105 0.895 43 H 0.061 0.939 44 H 0.090 0.910 45 H 0.112 0.888 46 H 0.151 0.849 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -7.168 1.329 -0.680 7.322 hybrid contribution -1.928 2.209 -0.413 2.960 sum -9.096 3.537 -1.093 9.820 Atomic orbital electron populations 1.23101 0.78078 1.04392 1.01310 1.86117 1.21533 1.26174 1.88889 1.18809 0.91911 0.84570 0.98903 1.20059 0.91637 0.96772 1.03603 1.19487 0.96625 0.90030 1.03811 1.25373 0.91482 1.12373 0.88835 1.86704 1.73781 1.41937 1.31446 0.93032 0.79771 0.80250 0.82774 1.18664 0.90828 0.84602 1.00453 1.86112 1.33899 1.11075 1.89245 1.22448 0.93169 0.84143 1.03978 1.20013 0.88825 0.84182 0.77112 1.90798 1.14144 1.86547 1.47038 1.45802 1.10621 1.05229 1.76406 1.21378 0.92921 0.81517 1.03115 1.22567 0.99379 0.93815 0.98567 0.88174 1.23214 1.00094 0.93937 0.99241 1.23729 0.96351 0.89502 0.90233 0.89332 1.87964 1.38944 1.43551 1.59019 1.22822 0.94868 0.90258 0.98822 1.23683 1.02400 0.96032 0.96774 1.21018 0.92825 0.98686 1.05883 1.21080 1.00315 0.91509 1.05485 0.92629 0.87865 0.92547 0.83630 0.90404 0.78365 1.17534 1.17898 0.88776 0.88913 0.76378 0.90818 0.90699 0.88499 0.90381 0.93955 0.89467 0.93897 0.91042 0.88764 0.84925 0.84710 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.42 10.50 -19.69 -0.21 -0.63 16 3 C 0.10 0.17 6.68 -39.24 -0.26 -0.10 16 4 C -0.10 -0.20 8.59 -39.45 -0.34 -0.54 16 5 C -0.10 -0.26 5.28 -104.49 -0.55 -0.81 16 6 C -0.07 -0.24 2.33 36.01 0.08 -0.15 16 7 O -0.53 -2.21 12.65 -35.23 -0.45 -2.66 16 8 Si 0.74 1.47 30.17 -169.99 -5.13 -3.66 16 9 C 0.10 0.19 6.62 -39.24 -0.26 -0.07 16 10 O -0.29 -0.66 8.56 -39.58 -0.34 -1.00 16 11 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 12 C 0.51 0.52 7.91 -10.99 -0.09 0.43 16 13 O -0.51 -3.12 16.50 -14.35 -0.24 -3.36 16 14 N -0.73 1.53 5.56 -60.29 -0.33 1.19 16 15 C 0.13 -0.17 5.51 -4.04 -0.02 -0.19 16 16 C -0.12 0.38 3.75 -89.81 -0.34 0.04 16 17 H 0.10 -0.44 8.14 -51.93 -0.42 -0.87 16 18 C -0.13 0.22 7.46 -25.92 -0.19 0.03 16 19 C 0.06 -0.07 4.32 -25.77 -0.11 -0.18 16 20 H 0.09 -0.23 7.87 -51.93 -0.41 -0.64 16 21 O -0.38 -0.48 10.72 -35.23 -0.38 -0.86 16 22 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 23 C -0.15 0.33 7.48 -25.78 -0.19 0.14 16 24 C -0.17 0.02 9.03 -39.45 -0.36 -0.33 16 25 C -0.17 0.00 9.03 -39.45 -0.36 -0.36 16 26 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 27 H 0.10 -0.37 8.14 -51.93 -0.42 -0.80 16 28 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 29 H 0.15 0.06 5.13 -52.49 -0.27 -0.21 16 30 H 0.08 0.32 7.82 -51.93 -0.41 -0.09 16 31 H 0.37 1.03 8.60 45.56 0.39 1.43 16 32 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 33 H -0.25 -1.20 7.11 56.52 0.40 -0.79 16 34 H 0.09 -0.37 7.65 -51.93 -0.40 -0.76 16 35 H 0.09 -0.34 7.67 -51.93 -0.40 -0.74 16 36 H 0.40 -2.14 8.47 -40.82 -0.35 -2.48 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.07 0.02 7.85 -51.93 -0.41 -0.39 16 39 H 0.10 -0.07 8.10 -51.93 -0.42 -0.49 16 40 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 41 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 43 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 45 H 0.09 -0.08 7.90 -51.93 -0.41 -0.49 16 46 H 0.13 -0.41 6.29 -52.49 -0.33 -0.74 16 47 H 0.14 -0.31 6.29 -52.49 -0.33 -0.64 16 LS Contribution 388.85 15.07 5.86 5.86 Total: 0.00 -9.57 388.85 -9.03 -18.60 By element: Atomic # 1 Polarization: -6.41 SS G_CDS: -7.11 Total: -13.51 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: -0.71 Total: 0.03 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -0.33 Total: 1.19 kcal Atomic # 8 Polarization: -6.89 SS G_CDS: -1.61 Total: -8.50 kcal Atomic # 14 Polarization: 1.47 SS G_CDS: -5.13 Total: -3.66 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -9.57 -9.03 -18.60 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.799 kcal (2) G-P(sol) polarization free energy of solvation -9.570 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.368 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.026 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.596 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds