Wall clock time and date at job start Sat Mar 6 2021 18:30:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35992 * 117.00122 * 2 1 4 4 C 1.39152 * 120.07489 * 179.97438 * 3 2 1 5 5 O 1.35988 * 120.07268 * 0.02562 * 4 3 2 6 6 C 1.42900 * 116.99929 * 179.97438 * 5 4 3 7 7 C 1.50702 * 109.47065 * 179.97438 * 6 5 4 8 8 O 1.21280 * 120.00194 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99857 * 179.97438 * 7 6 5 10 10 C 1.46498 * 119.99953 * 180.02562 * 9 7 6 11 11 C 1.53001 * 109.47148 * 180.02562 * 10 9 7 12 12 H 1.08997 * 112.84738 * 316.19875 * 11 10 9 13 13 C 1.53782 * 113.61259 * 185.00373 * 11 10 9 14 14 C 1.53784 * 87.07948 * 219.93809 * 13 11 10 15 15 H 1.09002 * 113.60927 * 270.80203 * 14 13 11 16 16 O 1.42899 * 113.61467 * 139.98237 * 14 13 11 17 17 C 1.42905 * 113.99778 * 150.00011 * 16 14 13 18 18 C 1.53777 * 113.68887 * 87.46922 * 11 10 9 19 19 C 1.38565 * 119.85162 * 180.29997 * 4 3 2 20 20 C 1.38242 * 120.00073 * 359.46555 * 19 4 3 21 21 C 1.38253 * 120.14515 * 0.51234 * 20 19 4 22 22 C 1.50706 * 119.92427 * 179.74258 * 21 20 19 23 23 O 1.42892 * 109.47062 * 245.02020 * 22 21 20 24 24 Si 1.86291 * 109.47126 * 5.02516 * 22 21 20 25 25 C 1.38238 * 120.14915 * 359.76615 * 21 20 19 26 26 H 1.09008 * 109.46809 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.47230 * 299.99995 * 1 2 3 28 28 H 1.09004 * 109.47234 * 60.00338 * 1 2 3 29 29 H 1.09002 * 109.46999 * 60.00139 * 6 5 4 30 30 H 1.08990 * 109.47680 * 300.00344 * 6 5 4 31 31 H 0.96995 * 120.00242 * 0.02562 * 9 7 6 32 32 H 1.09002 * 109.46897 * 60.00552 * 10 9 7 33 33 H 1.08999 * 109.47471 * 300.01123 * 10 9 7 34 34 H 1.08996 * 113.61852 * 105.38375 * 13 11 10 35 35 H 1.09007 * 113.68961 * 334.49158 * 13 11 10 36 36 H 1.09001 * 109.47103 * 180.02562 * 17 16 14 37 37 H 1.09004 * 109.47054 * 299.99711 * 17 16 14 38 38 H 1.09000 * 109.47187 * 59.99767 * 17 16 14 39 39 H 1.09000 * 113.61947 * 25.43867 * 18 11 10 40 40 H 1.09003 * 113.61445 * 254.54048 * 18 11 10 41 41 H 1.08004 * 119.99895 * 179.70058 * 19 4 3 42 42 H 1.08001 * 119.92975 * 180.26148 * 20 19 4 43 43 H 1.09007 * 109.46352 * 125.02573 * 22 21 20 44 44 H 0.96705 * 114.00075 * 60.00253 * 23 22 21 45 45 H 1.48503 * 109.99741 * 179.97438 * 24 22 21 46 46 H 1.48500 * 110.00258 * 301.31377 * 24 22 21 47 47 H 1.07994 * 120.00738 * 179.97438 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6003 0.3007 0.0005 7 6 6.2519 -1.0582 0.0012 8 8 5.5670 -2.0591 0.0011 9 7 7.5957 -1.1611 0.0008 10 6 8.2292 -2.4821 0.0008 11 6 9.7504 -2.3182 0.0009 12 1 10.0936 -1.5521 -0.6943 13 6 10.5131 -3.6479 -0.1219 14 6 11.5059 -3.0829 0.9078 15 1 12.3298 -2.5271 0.4603 16 8 11.9431 -4.0454 1.8693 17 6 13.2636 -3.8141 2.3641 18 6 10.3579 -2.1903 1.4078 19 6 4.0602 2.5233 0.0068 20 6 3.3029 3.6798 0.0014 21 6 1.9223 3.6057 0.0004 22 6 1.1016 4.8696 0.0003 23 8 0.3641 4.9588 1.2210 24 14 2.2309 6.3434 -0.1521 25 6 1.2931 2.3748 -0.0001 26 1 -0.3633 -1.0278 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 5.9065 0.8505 0.8906 30 1 5.9066 0.8505 -0.8893 31 1 8.1435 -0.3606 0.0004 32 1 7.9227 -3.0320 -0.8890 33 1 7.9231 -3.0318 0.8909 34 1 10.9508 -3.8109 -1.1067 35 1 9.9521 -4.5097 0.2398 36 1 13.5210 -4.5873 3.0880 37 1 13.9720 -3.8420 1.5361 38 1 13.3054 -2.8369 2.8452 39 1 9.7534 -2.6525 2.1882 40 1 10.6703 -1.1764 1.6579 41 1 5.1385 2.5840 0.0121 42 1 3.7907 4.6434 0.0020 43 1 0.4096 4.8534 -0.8419 44 1 0.9171 4.9777 2.0141 45 1 1.4335 7.5962 -0.1540 46 1 3.1999 6.3593 0.9730 47 1 0.2146 2.3196 -0.0005 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:30:33 Heat of formation + Delta-G solvation = -120.577163 kcal Electronic energy + Delta-G solvation = -28537.839651 eV Core-core repulsion = 24268.834407 eV Total energy + Delta-G solvation = -4269.005244 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.77812 -41.03998 -40.32100 -39.18270 -38.88868 -37.47217 -36.98456 -35.28061 -32.10643 -31.49061 -30.47836 -28.61968 -28.28985 -27.33565 -26.77197 -26.16804 -23.79351 -23.18855 -22.50308 -21.73682 -20.64280 -19.75813 -18.70938 -18.38820 -18.04468 -17.58620 -17.53308 -17.12459 -16.80023 -16.71050 -16.60480 -16.20491 -16.14469 -15.89959 -15.79473 -15.70806 -15.36390 -15.05626 -14.60245 -14.28026 -14.21633 -13.74992 -13.66454 -13.54024 -13.52417 -13.43958 -12.95648 -12.64135 -12.58120 -12.54711 -12.17192 -12.12613 -12.06311 -11.99410 -11.82280 -11.63495 -11.54177 -10.83198 -10.62613 -10.49929 -10.15268 -9.78210 -8.85084 -4.99016 0.18008 0.30330 1.25350 1.46733 1.54895 1.56052 1.93265 2.32875 2.54070 2.56871 2.78165 3.33185 3.34194 3.42514 3.55917 3.63031 3.67798 3.70088 3.77983 3.80778 3.91982 3.94692 3.98661 4.12919 4.15662 4.26507 4.30074 4.34538 4.35184 4.40536 4.53031 4.57019 4.59642 4.61625 4.66248 4.71380 4.73577 4.77727 4.88738 5.00572 5.02505 5.10662 5.16424 5.34383 5.37294 5.56027 5.97580 6.21204 6.34712 6.37766 6.55903 7.14097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.039 3.961 7 C 0.514 3.486 8 O -0.509 6.509 9 N -0.727 5.727 10 C 0.134 3.866 11 C -0.124 4.124 12 H 0.100 0.900 13 C -0.127 4.127 14 C 0.060 3.940 15 H 0.089 0.911 16 O -0.377 6.377 17 C 0.029 3.971 18 C -0.151 4.151 19 C -0.170 4.170 20 C -0.115 4.115 21 C -0.113 4.113 22 C -0.073 4.073 23 O -0.530 6.530 24 Si 0.688 3.312 25 C -0.146 4.146 26 H 0.103 0.897 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.093 0.907 30 H 0.095 0.905 31 H 0.402 0.598 32 H 0.074 0.926 33 H 0.074 0.926 34 H 0.078 0.922 35 H 0.096 0.904 36 H 0.086 0.914 37 H 0.042 0.958 38 H 0.042 0.958 39 H 0.094 0.906 40 H 0.071 0.929 41 H 0.139 0.861 42 H 0.132 0.868 43 H 0.118 0.882 44 H 0.376 0.624 45 H -0.257 1.257 46 H -0.260 1.260 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.903 4.208 -1.950 7.507 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.298 3.702 8 O -0.382 6.382 9 N -0.382 5.382 10 C 0.011 3.989 11 C -0.143 4.143 12 H 0.119 0.881 13 C -0.165 4.165 14 C 0.002 3.998 15 H 0.107 0.893 16 O -0.295 6.295 17 C -0.068 4.068 18 C -0.189 4.189 19 C -0.189 4.189 20 C -0.133 4.133 21 C -0.114 4.114 22 C -0.183 4.183 23 O -0.336 6.336 24 Si 0.589 3.411 25 C -0.165 4.165 26 H 0.121 0.879 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.111 0.889 30 H 0.113 0.887 31 H 0.236 0.764 32 H 0.092 0.908 33 H 0.092 0.908 34 H 0.096 0.904 35 H 0.115 0.885 36 H 0.105 0.895 37 H 0.061 0.939 38 H 0.060 0.940 39 H 0.112 0.888 40 H 0.090 0.910 41 H 0.157 0.843 42 H 0.150 0.850 43 H 0.136 0.864 44 H 0.224 0.776 45 H -0.183 1.183 46 H -0.185 1.185 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 5.059 3.630 -1.929 6.519 hybrid contribution 0.240 0.584 1.088 1.258 sum 5.300 4.215 -0.841 6.823 Atomic orbital electron populations 1.23135 0.78116 1.04422 1.01356 1.86252 1.21335 1.25333 1.88524 1.18286 0.89024 0.85569 1.01020 1.18291 0.88325 0.85792 1.01680 1.86281 1.16082 1.27727 1.88803 1.22478 0.81256 0.96328 1.03940 1.20017 0.82452 0.90554 0.77143 1.90806 1.62637 1.38036 1.46765 1.45796 1.05855 1.09911 1.76623 1.21366 0.90555 0.83922 1.03090 1.22569 0.93684 0.99515 0.98508 0.88133 1.23216 0.96804 0.97269 0.99207 1.23694 0.95175 0.90732 0.90222 0.89343 1.87968 1.31737 1.50912 1.58907 1.22818 0.83647 1.01502 0.98796 1.23635 0.98023 1.00409 0.96839 1.20988 1.00448 0.90676 1.06748 1.20732 0.92895 0.98016 1.01619 1.19969 0.93686 0.95087 1.02665 1.25010 1.01668 1.01724 0.89854 1.86600 1.36177 1.95486 1.15374 0.94938 0.79620 0.76421 0.90082 1.20943 1.00365 0.90409 1.04758 0.87858 0.92533 0.92508 0.88874 0.88719 0.76400 0.90809 0.90784 0.90371 0.88507 0.89503 0.93903 0.93968 0.88780 0.91042 0.84323 0.85017 0.86428 0.77615 1.18262 1.18486 0.84206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.36 10.28 -34.22 -0.35 -1.71 16 3 C 0.11 0.37 6.70 -39.12 -0.26 0.10 16 4 C 0.11 0.29 6.70 -39.12 -0.26 0.03 16 5 O -0.28 -1.13 9.45 -47.33 -0.45 -1.58 16 6 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 7 C 0.51 0.98 7.91 -10.98 -0.09 0.89 16 8 O -0.51 -3.76 16.50 -14.35 -0.24 -4.00 16 9 N -0.73 1.16 5.56 -60.29 -0.33 0.83 16 10 C 0.13 -0.12 5.52 -4.04 -0.02 -0.14 16 11 C -0.12 0.35 3.75 -89.81 -0.34 0.01 16 12 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 13 C -0.13 0.20 7.47 -25.92 -0.19 0.01 16 14 C 0.06 -0.06 4.31 -25.92 -0.11 -0.18 16 15 H 0.09 -0.22 7.87 -51.93 -0.41 -0.62 16 16 O -0.38 -0.54 10.71 -35.23 -0.38 -0.91 16 17 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 18 C -0.15 0.30 7.46 -25.92 -0.19 0.10 16 19 C -0.17 0.04 9.04 -39.46 -0.36 -0.31 16 20 C -0.11 0.07 8.66 -39.57 -0.34 -0.28 16 21 C -0.11 -0.04 5.35 -104.61 -0.56 -0.60 16 22 C -0.07 0.03 2.80 36.01 0.10 0.13 16 23 O -0.53 -0.59 12.83 -35.23 -0.45 -1.04 16 24 Si 0.69 -0.95 29.88 -169.99 -5.08 -6.03 16 25 C -0.15 -0.23 8.67 -39.46 -0.34 -0.57 16 26 H 0.10 -0.09 8.14 -51.92 -0.42 -0.51 16 27 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 28 H 0.06 -0.05 7.66 -51.93 -0.40 -0.44 16 29 H 0.09 -0.30 7.65 -51.93 -0.40 -0.70 16 30 H 0.09 -0.33 7.68 -51.93 -0.40 -0.73 16 31 H 0.40 -2.01 8.47 -40.82 -0.35 -2.36 16 32 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 0.05 7.85 -51.93 -0.41 -0.36 16 34 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 35 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 36 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 40 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 41 H 0.14 -0.47 6.30 -52.48 -0.33 -0.80 16 42 H 0.13 -0.34 4.83 -52.49 -0.25 -0.60 16 43 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 44 H 0.38 -0.61 8.70 45.56 0.40 -0.21 16 45 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 46 H -0.26 -0.08 7.00 56.52 0.40 0.32 16 47 H 0.14 0.07 6.30 -52.49 -0.33 -0.26 16 LS Contribution 389.61 15.07 5.87 5.87 Total: 0.00 -11.29 389.61 -9.20 -20.49 By element: Atomic # 1 Polarization: -6.27 SS G_CDS: -7.10 Total: -13.37 kcal Atomic # 6 Polarization: 2.14 SS G_CDS: -0.69 Total: 1.45 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -0.33 Total: 0.83 kcal Atomic # 8 Polarization: -7.38 SS G_CDS: -1.87 Total: -9.24 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.08 Total: -6.03 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -11.29 -9.20 -20.49 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.084 kcal (2) G-P(sol) polarization free energy of solvation -11.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.374 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.203 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.493 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.577 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds