Wall clock time and date at job start Sat Mar 6 2021 18:30:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35963 * 116.99931 * 2 1 4 4 C 1.39455 * 120.11807 * 180.02562 * 3 2 1 5 5 O 1.34774 * 133.24375 * 359.69284 * 4 3 2 6 6 C 1.34924 * 110.84338 * 180.02562 * 5 4 3 7 7 C 1.46994 * 125.14015 * 179.97438 * 6 5 4 8 8 O 1.21655 * 119.99732 * 180.02562 * 7 6 5 9 9 N 1.34774 * 120.00051 * 0.03368 * 7 6 5 10 10 C 1.46500 * 120.00025 * 180.02562 * 9 7 6 11 11 C 1.52997 * 109.47274 * 179.97438 * 10 9 7 12 12 H 1.09005 * 112.84439 * 316.19264 * 11 10 9 13 13 C 1.53778 * 113.61704 * 184.99889 * 11 10 9 14 14 C 1.53776 * 87.08138 * 220.01788 * 13 11 10 15 15 H 1.08997 * 113.61492 * 270.88340 * 14 13 11 16 16 O 1.42902 * 113.61526 * 140.06407 * 14 13 11 17 17 C 1.42900 * 114.00135 * 150.00042 * 16 14 13 18 18 C 1.53780 * 87.08305 * 25.43201 * 14 13 11 19 19 C 1.35814 * 109.71846 * 0.02562 * 6 5 4 20 20 C 1.40610 * 119.13490 * 179.72259 * 4 3 2 21 21 C 1.39770 * 120.11997 * 359.97438 * 20 4 3 22 22 C 1.50701 * 120.09539 * 179.97438 * 21 20 4 23 23 O 1.42897 * 109.47329 * 284.99857 * 22 21 20 24 24 Si 1.86299 * 109.47347 * 164.99554 * 22 21 20 25 25 C 1.36633 * 119.81484 * 359.97438 * 21 20 4 26 26 C 1.38260 * 120.12286 * 359.72085 * 3 2 1 27 27 H 1.09001 * 109.47163 * 300.00446 * 1 2 3 28 28 H 1.08999 * 109.47205 * 60.00351 * 1 2 3 29 29 H 1.08996 * 109.47226 * 180.02562 * 1 2 3 30 30 H 0.97001 * 119.99904 * 359.97438 * 9 7 6 31 31 H 1.09004 * 109.46773 * 299.99216 * 10 9 7 32 32 H 1.09002 * 109.47302 * 59.99002 * 10 9 7 33 33 H 1.09005 * 113.61132 * 334.56711 * 13 11 10 34 34 H 1.09000 * 113.61547 * 105.38290 * 13 11 10 35 35 H 1.08997 * 109.47233 * 179.97438 * 17 16 14 36 36 H 1.09001 * 109.47070 * 300.00019 * 17 16 14 37 37 H 1.08998 * 109.47391 * 59.99379 * 17 16 14 38 38 H 1.09003 * 113.61282 * 220.01895 * 18 14 13 39 39 H 1.08999 * 113.61980 * 89.11678 * 18 14 13 40 40 H 1.08002 * 126.95200 * 180.02562 * 19 6 5 41 41 H 1.09007 * 109.46940 * 44.99852 * 22 21 20 42 42 H 0.96701 * 113.99774 * 300.00290 * 23 22 21 43 43 H 1.48500 * 110.00122 * 58.68229 * 24 22 21 44 44 H 1.48499 * 109.99957 * 180.02562 * 24 22 21 45 45 H 1.08000 * 119.75313 * 180.02562 * 25 21 20 46 46 H 1.07994 * 119.65963 * 0.27409 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4387 1.2873 -0.0005 5 8 4.4141 0.3573 0.0041 6 6 5.6317 0.9385 0.0016 7 6 6.9131 0.2183 0.0059 8 8 7.9596 0.8387 0.0035 9 7 6.9286 -1.1294 0.0122 10 6 8.2057 -1.8472 0.0171 11 6 7.9435 -3.3545 0.0245 12 1 7.1561 -3.6437 0.7207 13 6 9.2207 -4.2014 0.1528 14 6 8.5942 -5.1595 -0.8740 15 1 7.9843 -5.9431 -0.4246 16 8 9.5283 -5.6635 -1.8309 17 6 9.2119 -6.9682 -2.3206 18 6 7.7787 -3.9581 -1.3803 19 6 5.4945 2.2897 -0.0044 20 6 4.0555 2.5509 -0.0065 21 6 3.2767 3.7115 -0.0123 22 6 3.9383 5.0655 -0.0181 23 8 4.4598 5.3464 1.2823 24 14 2.6869 6.3662 -0.4796 25 6 1.9137 3.6150 -0.0127 26 6 1.2957 2.3726 -0.0058 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 6.0942 -1.6240 0.0144 31 1 8.7751 -1.5816 -0.8737 32 1 8.7733 -1.5730 0.9063 33 1 10.1168 -3.6977 -0.2100 34 1 9.3540 -4.6436 1.1400 35 1 9.9678 -7.2788 -3.0418 36 1 9.1910 -7.6730 -1.4894 37 1 8.2353 -6.9479 -2.8042 38 1 6.7471 -4.2052 -1.6311 39 1 8.2804 -3.3879 -2.1621 40 1 6.2875 3.0229 -0.0080 41 1 4.7512 5.0696 -0.7443 42 1 3.7906 5.3588 1.9802 43 1 1.5577 6.3495 0.4847 44 1 3.3271 7.7061 -0.4894 45 1 1.3129 4.5125 -0.0176 46 1 0.2175 2.3120 -0.0059 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12345242_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:30:45 Heat of formation + Delta-G solvation = -80.120986 kcal Electronic energy + Delta-G solvation = -30062.202411 eV Core-core repulsion = 25694.036817 eV Total energy + Delta-G solvation = -4368.165594 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.150 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -43.64785 -41.08683 -40.65741 -40.02007 -39.12239 -37.47849 -37.08626 -35.36327 -33.54614 -31.96435 -31.15130 -29.48292 -28.53852 -27.48535 -26.77011 -26.32242 -24.88729 -23.94831 -23.16494 -21.97338 -21.66011 -20.76410 -19.66533 -18.97374 -18.63583 -17.96286 -17.69253 -17.64204 -17.00685 -16.96419 -16.76115 -16.61881 -16.29033 -16.17640 -15.93392 -15.85159 -15.59963 -15.14033 -14.64614 -14.61624 -14.46969 -14.19248 -14.06654 -13.64933 -13.48687 -13.45443 -13.44121 -13.33015 -12.95091 -12.63185 -12.55922 -12.35257 -12.13517 -12.06493 -11.81423 -11.67585 -11.51988 -11.31189 -10.93093 -10.60698 -10.46571 -10.22163 -9.75272 -8.98713 -4.99845 -0.56961 0.12496 0.73757 1.21725 1.31769 1.52309 1.91974 1.96561 2.06489 2.10347 2.40975 2.80416 3.21423 3.35887 3.42852 3.50616 3.53781 3.61135 3.70713 3.73691 3.84065 3.87879 3.98024 4.04931 4.08088 4.10448 4.19305 4.19858 4.38193 4.43848 4.44130 4.48158 4.49063 4.61028 4.64984 4.74689 4.75562 4.78231 4.84462 4.90186 4.92398 5.04988 5.08225 5.16257 5.24306 5.29551 5.35235 5.64266 6.15849 6.24397 6.35990 6.39630 6.97230 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.151 3.849 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.023 4.023 7 C 0.600 3.400 8 O -0.509 6.509 9 N -0.715 5.715 10 C 0.130 3.870 11 C -0.126 4.126 12 H 0.101 0.899 13 C -0.126 4.126 14 C 0.060 3.940 15 H 0.089 0.911 16 O -0.377 6.377 17 C 0.029 3.971 18 C -0.152 4.152 19 C -0.105 4.105 20 C -0.081 4.081 21 C -0.095 4.095 22 C -0.074 4.074 23 O -0.525 6.525 24 Si 0.692 3.308 25 C -0.096 4.096 26 C -0.178 4.178 27 H 0.060 0.940 28 H 0.061 0.939 29 H 0.105 0.895 30 H 0.408 0.592 31 H 0.078 0.922 32 H 0.077 0.923 33 H 0.097 0.903 34 H 0.078 0.922 35 H 0.086 0.914 36 H 0.042 0.958 37 H 0.042 0.958 38 H 0.072 0.928 39 H 0.094 0.906 40 H 0.175 0.825 41 H 0.119 0.881 42 H 0.375 0.625 43 H -0.258 1.258 44 H -0.255 1.255 45 H 0.140 0.860 46 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.718 -3.180 -1.207 7.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.105 3.895 4 C -0.003 4.003 5 O -0.076 6.076 6 C -0.073 4.073 7 C 0.385 3.615 8 O -0.386 6.386 9 N -0.367 5.367 10 C 0.008 3.992 11 C -0.144 4.144 12 H 0.119 0.881 13 C -0.164 4.164 14 C 0.002 3.998 15 H 0.107 0.893 16 O -0.295 6.295 17 C -0.068 4.068 18 C -0.189 4.189 19 C -0.125 4.125 20 C -0.082 4.082 21 C -0.095 4.095 22 C -0.183 4.183 23 O -0.331 6.331 24 Si 0.593 3.407 25 C -0.114 4.114 26 C -0.197 4.197 27 H 0.078 0.922 28 H 0.080 0.920 29 H 0.123 0.877 30 H 0.244 0.756 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.115 0.885 34 H 0.096 0.904 35 H 0.105 0.895 36 H 0.061 0.939 37 H 0.060 0.940 38 H 0.090 0.910 39 H 0.113 0.887 40 H 0.192 0.808 41 H 0.137 0.863 42 H 0.223 0.777 43 H -0.183 1.183 44 H -0.180 1.180 45 H 0.157 0.843 46 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -5.594 -2.400 -1.356 6.237 hybrid contribution -0.895 -0.599 1.264 1.660 sum -6.489 -2.999 -0.093 7.149 Atomic orbital electron populations 1.23187 0.77329 1.04739 1.01798 1.86171 1.22146 1.25709 1.88378 1.17744 0.86499 0.85869 0.99420 1.18779 0.87447 0.86994 1.07067 1.84047 1.12674 1.34732 1.76106 1.21990 0.83866 0.92617 1.08831 1.16612 0.85416 0.82136 0.77290 1.90930 1.30316 1.67470 1.49868 1.45896 1.10731 1.05684 1.74351 1.21463 0.84787 0.89684 1.03307 1.22580 0.99784 0.93369 0.98697 0.88067 1.23209 0.97622 0.96310 0.99243 1.23684 0.91379 0.94439 0.90272 0.89345 1.87961 1.49574 1.32659 1.59314 1.22814 1.01112 0.84017 0.98819 1.23639 1.00900 0.97601 0.96790 1.22751 0.94752 0.94337 1.00672 1.19406 0.92635 0.92041 1.04145 1.19401 0.92812 0.94331 1.03004 1.25033 1.06866 0.97893 0.88533 1.86642 1.37572 1.92530 1.16371 0.94890 0.77536 0.77919 0.90373 1.20585 0.93484 0.97800 0.99525 1.20961 1.00345 0.90537 1.07846 0.92170 0.92011 0.87658 0.75643 0.90397 0.90485 0.88476 0.90351 0.89511 0.93915 0.93965 0.90968 0.88726 0.80795 0.86333 0.77722 1.18328 1.17969 0.84251 0.83513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.40 10.50 -19.63 -0.21 -0.61 16 3 C 0.15 0.24 6.70 -39.12 -0.26 -0.02 16 4 C 0.05 0.14 7.35 -38.23 -0.28 -0.14 16 5 O -0.17 -0.58 10.28 2.68 0.03 -0.56 16 6 C -0.02 -0.08 7.07 -36.90 -0.26 -0.34 16 7 C 0.60 2.09 7.80 -12.71 -0.10 1.99 16 8 O -0.51 -3.29 16.83 5.23 0.09 -3.20 16 9 N -0.72 -0.47 5.55 -61.52 -0.34 -0.81 16 10 C 0.13 -0.01 5.51 -4.04 -0.02 -0.04 16 11 C -0.13 0.22 3.75 -89.81 -0.34 -0.11 16 12 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 13 C -0.13 0.14 7.47 -25.92 -0.19 -0.06 16 14 C 0.06 -0.03 4.31 -25.92 -0.11 -0.14 16 15 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 16 O -0.38 -0.69 10.72 -35.23 -0.38 -1.06 16 17 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 18 C -0.15 0.15 7.47 -25.92 -0.19 -0.04 16 19 C -0.10 -0.33 10.68 -37.23 -0.40 -0.73 16 20 C -0.08 -0.21 6.16 -105.21 -0.65 -0.86 16 21 C -0.09 -0.07 5.26 -104.63 -0.55 -0.62 16 22 C -0.07 0.00 2.70 36.01 0.10 0.09 16 23 O -0.52 -0.82 12.88 -35.23 -0.45 -1.27 16 24 Si 0.69 -0.96 30.25 -169.99 -5.14 -6.10 16 25 C -0.10 0.07 8.62 -39.97 -0.34 -0.27 16 26 C -0.18 0.12 9.03 -39.38 -0.36 -0.24 16 27 H 0.06 -0.23 7.67 -51.93 -0.40 -0.63 16 28 H 0.06 -0.25 7.65 -51.93 -0.40 -0.65 16 29 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 30 H 0.41 -0.40 8.19 -40.82 -0.33 -0.74 16 31 H 0.08 0.06 7.84 -51.93 -0.41 -0.35 16 32 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.10 -0.03 8.10 -51.93 -0.42 -0.45 16 34 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 37 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 38 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 40 H 0.17 0.44 8.06 -52.49 -0.42 0.02 16 41 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 42 H 0.38 -0.54 8.70 45.56 0.40 -0.15 16 43 H -0.26 0.06 6.69 56.52 0.38 0.43 16 44 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 45 H 0.14 -0.37 4.81 -52.49 -0.25 -0.62 16 46 H 0.15 -0.50 6.26 -52.49 -0.33 -0.83 16 LS Contribution 387.49 15.07 5.84 5.84 Total: 0.00 -8.50 387.49 -8.84 -17.34 By element: Atomic # 1 Polarization: -3.66 SS G_CDS: -6.40 Total: -10.06 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -1.87 Total: 0.49 kcal Atomic # 7 Polarization: -0.47 SS G_CDS: -0.34 Total: -0.81 kcal Atomic # 8 Polarization: -5.78 SS G_CDS: -0.92 Total: -6.70 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.14 Total: -6.10 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -8.50 -8.84 -17.34 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12345242_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.778 kcal (2) G-P(sol) polarization free energy of solvation -8.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.282 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.343 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds