Wall clock time and date at job start Sat Mar 6 2021 19:29:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35665 * 116.99966 * 2 1 4 4 C 1.38404 * 120.11296 * 0.02562 * 3 2 1 5 5 C 1.38730 * 120.02578 * 180.02562 * 4 3 2 6 6 O 1.35712 * 119.86304 * 179.97438 * 5 4 3 7 7 C 1.42898 * 117.00009 * 0.02562 * 6 5 4 8 8 C 1.39152 * 120.27566 * 0.02562 * 5 4 3 9 9 C 1.50690 * 119.88025 * 179.97438 * 8 5 4 10 10 O 1.42901 * 109.47569 * 75.00093 * 9 8 5 11 11 Si 1.86302 * 109.47089 * 195.00060 * 9 8 5 12 12 C 1.37593 * 120.23635 * 359.67512 * 8 5 4 13 13 C 1.39820 * 119.96115 * 0.61882 * 12 8 5 14 14 C 1.47297 * 120.13282 * 179.67333 * 13 12 8 15 15 O 1.21616 * 120.00104 * 179.72774 * 14 13 12 16 16 N 1.34783 * 120.00008 * 359.72959 * 14 13 12 17 17 C 1.46502 * 120.00132 * 179.97438 * 16 14 13 18 18 H 1.08998 * 112.90139 * 23.75317 * 17 16 14 19 19 C 1.53777 * 113.61305 * 155.00165 * 17 16 14 20 20 C 1.53784 * 87.07906 * 139.98287 * 19 17 16 21 21 H 1.09000 * 113.61131 * 89.20003 * 20 19 17 22 22 C 1.53000 * 113.61231 * 220.01640 * 20 19 17 23 23 O 1.42903 * 109.46726 * 183.47129 * 22 20 19 24 24 C 1.53778 * 87.17274 * 334.61121 * 20 19 17 25 25 H 1.09000 * 109.47246 * 60.00375 * 1 2 3 26 26 H 1.09007 * 109.47152 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.47415 * 300.00173 * 1 2 3 28 28 H 1.07995 * 119.99261 * 359.97438 * 4 3 2 29 29 H 1.09001 * 109.47109 * 300.00231 * 7 6 5 30 30 H 1.09002 * 109.47312 * 59.99860 * 7 6 5 31 31 H 1.09005 * 109.47036 * 180.02562 * 7 6 5 32 32 H 1.09007 * 109.47336 * 314.99631 * 9 8 5 33 33 H 0.96695 * 113.99733 * 59.99521 * 10 9 8 34 34 H 1.48499 * 109.99929 * 58.68043 * 11 9 8 35 35 H 1.48498 * 110.00191 * 179.97438 * 11 9 8 36 36 H 1.07992 * 120.01349 * 180.30156 * 12 8 5 37 37 H 0.97001 * 119.99901 * 359.97438 * 16 14 13 38 38 H 1.09001 * 113.61353 * 25.43558 * 19 17 16 39 39 H 1.09000 * 113.61641 * 254.53459 * 19 17 16 40 40 H 1.09002 * 109.47398 * 303.47374 * 22 20 19 41 41 H 1.09001 * 109.47194 * 63.47554 * 22 20 19 42 42 H 0.96700 * 113.99509 * 180.02562 * 23 22 20 43 43 H 1.09003 * 113.61363 * 139.94337 * 24 20 19 44 44 H 1.09005 * 113.61131 * 270.84024 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2088 0.0000 4 6 1.2933 2.3710 0.0005 5 6 1.9250 3.6062 0.0000 6 8 1.1849 4.7437 0.0000 7 6 -0.2361 4.5931 0.0011 8 6 3.3144 3.6836 -0.0016 9 6 3.9913 5.0299 -0.0028 10 8 3.8953 5.6125 1.2985 11 14 5.7855 4.8225 -0.4594 12 6 4.0723 2.5352 0.0040 13 6 3.4460 1.2852 -0.0016 14 6 4.2538 0.0534 -0.0029 15 8 3.7065 -1.0327 -0.0028 16 7 5.5994 0.1300 -0.0040 17 6 6.4028 -1.0951 -0.0047 18 1 5.8666 -1.9538 -0.4086 19 6 7.8080 -0.9099 -0.6013 20 6 8.3203 -1.8259 0.5228 21 1 8.3097 -2.8843 0.2624 22 6 9.6541 -1.3745 1.1211 23 8 10.0857 -2.3268 2.0953 24 6 7.0962 -1.3802 1.3400 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8899 28 1 0.2148 2.3165 0.0005 29 1 -0.5439 4.0433 -0.8883 30 1 -0.5426 4.0442 0.8916 31 1 -0.7058 5.5768 0.0006 32 1 3.5044 5.6808 -0.7292 33 1 4.3083 5.0861 1.9966 34 1 5.8991 4.1883 -1.7973 35 1 6.4643 6.1433 -0.4647 36 1 5.1503 2.5995 0.0077 37 1 6.0359 0.9962 -0.0044 38 1 8.1793 0.1127 -0.5346 39 1 7.9191 -1.3375 -1.5978 40 1 10.4005 -1.3000 0.3302 41 1 9.5288 -0.4010 1.5952 42 1 10.9268 -2.1041 2.5172 43 1 6.6336 -2.1869 1.9085 44 1 7.2726 -0.4864 1.9384 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_12297780.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:29:31 Heat of formation + Delta-G solvation = -128.258940 kcal Electronic energy + Delta-G solvation = -28215.792666 eV Core-core repulsion = 24101.991934 eV Total energy + Delta-G solvation = -4113.800732 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.06969 -40.94488 -40.09604 -39.24146 -38.42103 -37.20527 -36.92782 -34.40128 -32.21783 -31.70717 -29.09510 -28.87028 -28.10604 -26.71023 -26.12508 -24.89497 -23.42370 -22.36583 -21.43761 -20.67253 -19.98696 -18.76640 -18.28194 -18.07296 -17.89548 -17.30172 -17.18232 -16.64252 -16.49585 -16.32995 -16.24642 -15.82807 -15.75419 -15.66610 -15.43136 -15.14060 -14.86573 -14.29934 -14.20530 -14.00452 -13.67235 -13.49990 -13.30601 -13.23658 -12.76939 -12.66612 -12.61001 -12.55338 -12.27830 -12.19763 -11.97446 -11.71654 -11.63746 -11.45093 -10.85497 -10.63995 -10.41060 -9.95001 -9.88241 -9.13341 -5.16267 -0.20661 0.11304 1.22979 1.56201 1.86500 1.93135 2.04369 2.14273 2.21476 2.70141 3.15671 3.40951 3.46108 3.48502 3.61175 3.66462 3.72175 3.81888 3.86923 3.97922 4.01899 4.04517 4.08642 4.13346 4.13732 4.23110 4.36898 4.41412 4.43261 4.50288 4.53942 4.56296 4.65922 4.75613 4.77399 4.81567 4.95867 5.02211 5.05600 5.11541 5.28999 5.34735 5.64195 6.00288 6.28979 6.60640 6.61851 6.68570 7.40622 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.234 3.766 4 C -0.314 4.314 5 C 0.222 3.778 6 O -0.296 6.296 7 C 0.021 3.979 8 C -0.199 4.199 9 C -0.049 4.049 10 O -0.535 6.535 11 Si 0.672 3.328 12 C -0.004 4.004 13 C -0.209 4.209 14 C 0.567 3.433 15 O -0.517 6.517 16 N -0.723 5.723 17 C 0.125 3.875 18 H 0.118 0.882 19 C -0.140 4.140 20 C -0.109 4.109 21 H 0.101 0.899 22 C 0.087 3.913 23 O -0.573 6.573 24 C -0.143 4.143 25 H 0.057 0.943 26 H 0.107 0.893 27 H 0.058 0.942 28 H 0.145 0.855 29 H 0.058 0.942 30 H 0.060 0.940 31 H 0.107 0.893 32 H 0.114 0.886 33 H 0.375 0.625 34 H -0.251 1.251 35 H -0.250 1.250 36 H 0.139 0.861 37 H 0.396 0.604 38 H 0.089 0.911 39 H 0.080 0.920 40 H 0.047 0.953 41 H 0.048 0.952 42 H 0.380 0.620 43 H 0.075 0.925 44 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.966 2.203 0.614 2.483 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.174 3.826 6 O -0.207 6.207 7 C -0.073 4.073 8 C -0.200 4.200 9 C -0.160 4.160 10 O -0.340 6.340 11 Si 0.573 3.427 12 C -0.022 4.022 13 C -0.213 4.213 14 C 0.355 3.645 15 O -0.393 6.393 16 N -0.375 5.375 17 C 0.021 3.979 18 H 0.136 0.864 19 C -0.178 4.178 20 C -0.128 4.128 21 H 0.120 0.880 22 C 0.009 3.991 23 O -0.379 6.379 24 C -0.182 4.182 25 H 0.076 0.924 26 H 0.126 0.874 27 H 0.076 0.924 28 H 0.162 0.838 29 H 0.077 0.923 30 H 0.079 0.921 31 H 0.125 0.875 32 H 0.132 0.868 33 H 0.222 0.778 34 H -0.176 1.176 35 H -0.175 1.175 36 H 0.156 0.844 37 H 0.232 0.768 38 H 0.107 0.893 39 H 0.098 0.902 40 H 0.065 0.935 41 H 0.066 0.934 42 H 0.227 0.773 43 H 0.094 0.906 44 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 0.431 1.787 -0.487 1.902 hybrid contribution -0.477 0.892 -0.071 1.014 sum -0.046 2.679 -0.558 2.736 Atomic orbital electron populations 1.23245 0.78213 1.04879 1.01327 1.86405 1.21189 1.25016 1.85754 1.18723 0.90651 0.84403 0.87736 1.21310 1.01150 0.91511 1.19408 1.18717 0.90450 0.84697 0.88697 1.86159 1.19466 1.28510 1.86573 1.23217 0.77819 1.04654 1.01648 1.19449 0.90861 0.96389 1.13332 1.24826 1.09689 0.92243 0.89260 1.86553 1.82054 1.49296 1.16115 0.95469 0.77348 0.84610 0.85308 1.20673 0.98413 0.90003 0.93154 1.19065 0.90689 0.93617 1.17959 1.17825 0.81887 0.88527 0.76298 1.90848 1.71383 1.28690 1.48407 1.45863 1.05859 1.09289 1.76466 1.22517 0.89779 0.88593 0.97053 0.86416 1.23376 0.94923 1.00585 0.98911 1.22336 0.93175 1.00821 0.96479 0.88041 1.22152 0.95167 0.91169 0.90623 1.86502 1.43624 1.50238 1.57506 1.23554 0.95684 1.02057 0.96910 0.92427 0.87434 0.92362 0.83771 0.92305 0.92140 0.87506 0.86817 0.77780 1.17590 1.17450 0.84385 0.76838 0.89256 0.90155 0.93479 0.93417 0.77275 0.90632 0.89548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.27 -1.00 8.56 -40.62 -0.35 -1.35 16 3 C 0.23 0.63 6.70 -38.74 -0.26 0.37 16 4 C -0.31 -0.29 8.01 -39.34 -0.31 -0.61 16 5 C 0.22 0.32 6.67 -39.06 -0.26 0.05 16 6 O -0.30 -0.43 9.80 -18.84 -0.18 -0.61 16 7 C 0.02 -0.04 9.80 101.05 0.99 0.95 16 8 C -0.20 -0.10 5.27 -104.52 -0.55 -0.65 16 9 C -0.05 0.00 2.37 36.00 0.09 0.08 16 10 O -0.54 -0.31 12.88 -35.23 -0.45 -0.76 16 11 Si 0.67 -1.18 29.91 -169.99 -5.08 -6.26 16 12 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 13 C -0.21 -0.44 5.89 -104.84 -0.62 -1.06 16 14 C 0.57 1.89 7.76 -12.57 -0.10 1.79 16 15 O -0.52 -3.78 14.75 -16.66 -0.25 -4.03 16 16 N -0.72 0.08 5.31 -54.04 -0.29 -0.20 16 17 C 0.13 0.00 4.24 -67.03 -0.28 -0.29 16 18 H 0.12 0.23 7.46 -51.93 -0.39 -0.16 16 19 C -0.14 0.31 7.40 -25.92 -0.19 0.11 16 20 C -0.11 0.10 4.00 -89.81 -0.36 -0.26 16 21 H 0.10 0.01 8.14 -51.93 -0.42 -0.41 16 22 C 0.09 -0.12 6.87 37.16 0.26 0.13 16 23 O -0.57 -0.24 13.66 -35.23 -0.48 -0.72 16 24 C -0.14 0.03 7.45 -25.83 -0.19 -0.16 16 25 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 26 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 27 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 28 H 0.14 -0.18 4.50 -52.49 -0.24 -0.42 16 29 H 0.06 -0.18 7.65 -51.93 -0.40 -0.57 16 30 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 31 H 0.11 -0.35 8.14 -51.93 -0.42 -0.78 16 32 H 0.11 0.14 7.82 -51.92 -0.41 -0.27 16 33 H 0.38 -1.33 8.70 45.56 0.40 -0.93 16 34 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 35 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 36 H 0.14 -0.53 3.44 -52.49 -0.18 -0.71 16 37 H 0.40 -1.28 6.75 -40.82 -0.28 -1.56 16 38 H 0.09 -0.35 8.08 -51.93 -0.42 -0.77 16 39 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 40 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.05 -0.13 7.88 -51.93 -0.41 -0.53 16 42 H 0.38 -1.44 9.12 45.56 0.42 -1.02 16 43 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 44 H 0.09 -0.10 7.92 -51.93 -0.41 -0.51 16 LS Contribution 360.55 15.07 5.43 5.43 Total: 0.00 -11.33 360.55 -8.01 -19.34 By element: Atomic # 1 Polarization: -6.74 SS G_CDS: -5.24 Total: -11.97 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -1.12 Total: 1.13 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: -0.29 Total: -0.20 kcal Atomic # 8 Polarization: -5.76 SS G_CDS: -1.71 Total: -7.47 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.08 Total: -6.26 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -11.33 -8.01 -19.34 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_12297780.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.921 kcal (2) G-P(sol) polarization free energy of solvation -11.326 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.012 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.338 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.259 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds