Wall clock time and date at job start Sat Mar 6 2021 19:29:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35665 * 116.99966 * 2 1 4 4 C 1.38404 * 120.11296 * 0.02562 * 3 2 1 5 5 C 1.38730 * 120.02578 * 180.02562 * 4 3 2 6 6 O 1.35712 * 119.86304 * 179.97438 * 5 4 3 7 7 C 1.42898 * 117.00009 * 0.02562 * 6 5 4 8 8 C 1.39152 * 120.27566 * 0.02562 * 5 4 3 9 9 C 1.50690 * 119.88025 * 179.97438 * 8 5 4 10 10 O 1.42901 * 109.47569 * 75.00093 * 9 8 5 11 11 Si 1.86302 * 109.47089 * 195.00060 * 9 8 5 12 12 C 1.37593 * 120.23635 * 359.67512 * 8 5 4 13 13 C 1.39820 * 119.96115 * 0.61882 * 12 8 5 14 14 C 1.47297 * 120.13282 * 179.67333 * 13 12 8 15 15 O 1.21616 * 120.00104 * 179.72774 * 14 13 12 16 16 N 1.34783 * 120.00008 * 359.72959 * 14 13 12 17 17 C 1.46502 * 120.00132 * 179.97438 * 16 14 13 18 18 H 1.08998 * 112.90139 * 23.75317 * 17 16 14 19 19 C 1.53777 * 113.61305 * 155.00165 * 17 16 14 20 20 C 1.53784 * 87.07906 * 139.98287 * 19 17 16 21 21 H 1.09000 * 113.61131 * 89.20003 * 20 19 17 22 22 C 1.53000 * 113.61231 * 220.01640 * 20 19 17 23 23 O 1.42903 * 109.46726 * 183.47129 * 22 20 19 24 24 C 1.53778 * 87.17274 * 334.61121 * 20 19 17 25 25 H 1.09000 * 109.47246 * 60.00375 * 1 2 3 26 26 H 1.09007 * 109.47152 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.47415 * 300.00173 * 1 2 3 28 28 H 1.07995 * 119.99261 * 359.97438 * 4 3 2 29 29 H 1.09001 * 109.47109 * 300.00231 * 7 6 5 30 30 H 1.09002 * 109.47312 * 59.99860 * 7 6 5 31 31 H 1.09005 * 109.47036 * 180.02562 * 7 6 5 32 32 H 1.09007 * 109.47336 * 314.99631 * 9 8 5 33 33 H 0.96695 * 113.99733 * 59.99521 * 10 9 8 34 34 H 1.48499 * 109.99929 * 58.68043 * 11 9 8 35 35 H 1.48498 * 110.00191 * 179.97438 * 11 9 8 36 36 H 1.07992 * 120.01349 * 180.30156 * 12 8 5 37 37 H 0.97001 * 119.99901 * 359.97438 * 16 14 13 38 38 H 1.09001 * 113.61353 * 25.43558 * 19 17 16 39 39 H 1.09000 * 113.61641 * 254.53459 * 19 17 16 40 40 H 1.09002 * 109.47398 * 303.47374 * 22 20 19 41 41 H 1.09001 * 109.47194 * 63.47554 * 22 20 19 42 42 H 0.96700 * 113.99509 * 180.02562 * 23 22 20 43 43 H 1.09003 * 113.61363 * 139.94337 * 24 20 19 44 44 H 1.09005 * 113.61131 * 270.84024 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2088 0.0000 4 6 1.2933 2.3710 0.0005 5 6 1.9250 3.6062 0.0000 6 8 1.1849 4.7437 0.0000 7 6 -0.2361 4.5931 0.0011 8 6 3.3144 3.6836 -0.0016 9 6 3.9913 5.0299 -0.0028 10 8 3.8953 5.6125 1.2985 11 14 5.7855 4.8225 -0.4594 12 6 4.0723 2.5352 0.0040 13 6 3.4460 1.2852 -0.0016 14 6 4.2538 0.0534 -0.0029 15 8 3.7065 -1.0327 -0.0028 16 7 5.5994 0.1300 -0.0040 17 6 6.4028 -1.0951 -0.0047 18 1 5.8666 -1.9538 -0.4086 19 6 7.8080 -0.9099 -0.6013 20 6 8.3203 -1.8259 0.5228 21 1 8.3097 -2.8843 0.2624 22 6 9.6541 -1.3745 1.1211 23 8 10.0857 -2.3268 2.0953 24 6 7.0962 -1.3802 1.3400 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8899 28 1 0.2148 2.3165 0.0005 29 1 -0.5439 4.0433 -0.8883 30 1 -0.5426 4.0442 0.8916 31 1 -0.7058 5.5768 0.0006 32 1 3.5044 5.6808 -0.7292 33 1 4.3083 5.0861 1.9966 34 1 5.8991 4.1883 -1.7973 35 1 6.4643 6.1433 -0.4647 36 1 5.1503 2.5995 0.0077 37 1 6.0359 0.9962 -0.0044 38 1 8.1793 0.1127 -0.5346 39 1 7.9191 -1.3375 -1.5978 40 1 10.4005 -1.3000 0.3302 41 1 9.5288 -0.4010 1.5952 42 1 10.9268 -2.1041 2.5172 43 1 6.6336 -2.1869 1.9085 44 1 7.2726 -0.4864 1.9384 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12366696_12297780.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:29:30 Heat of formation + Delta-G solvation = -134.188134 kcal Electronic energy + Delta-G solvation = -28216.049775 eV Core-core repulsion = 24101.991934 eV Total energy + Delta-G solvation = -4114.057841 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.12226 -40.98088 -40.12695 -39.32982 -38.44084 -37.15153 -36.97112 -34.52386 -32.24769 -31.73489 -29.01693 -28.79909 -28.03393 -26.62423 -26.13157 -24.93513 -23.39617 -22.36577 -21.55646 -20.62853 -19.99464 -18.80438 -18.24215 -18.05824 -17.90801 -17.35347 -17.20539 -16.66090 -16.48963 -16.31223 -16.21883 -15.89415 -15.78260 -15.64449 -15.38915 -15.12361 -14.92933 -14.30510 -14.19253 -14.00314 -13.62624 -13.35694 -13.25208 -13.24243 -12.68413 -12.60859 -12.55109 -12.52974 -12.29153 -12.19635 -11.97455 -11.66686 -11.62789 -11.37547 -10.89066 -10.70429 -10.38065 -10.04210 -9.91557 -9.19913 -5.04632 -0.27053 0.07089 1.31281 1.65798 1.74911 2.01447 2.10501 2.13013 2.19079 2.60102 3.31751 3.44056 3.50381 3.54910 3.64576 3.72904 3.77165 3.85210 3.90661 4.09456 4.13283 4.16425 4.22548 4.24582 4.25654 4.27130 4.47325 4.52332 4.55321 4.61912 4.64443 4.72394 4.74205 4.80617 4.83652 4.90171 4.94680 5.01367 5.11163 5.15232 5.28935 5.35982 5.64911 6.01780 6.27587 6.59131 6.84807 6.97989 7.28739 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.305 6.305 3 C 0.216 3.784 4 C -0.312 4.312 5 C 0.212 3.788 6 O -0.314 6.314 7 C 0.012 3.988 8 C -0.204 4.204 9 C -0.063 4.063 10 O -0.554 6.554 11 Si 0.777 3.223 12 C 0.011 3.989 13 C -0.226 4.226 14 C 0.563 3.437 15 O -0.568 6.568 16 N -0.705 5.705 17 C 0.117 3.883 18 H 0.090 0.910 19 C -0.121 4.121 20 C -0.112 4.112 21 H 0.083 0.917 22 C 0.084 3.916 23 O -0.601 6.601 24 C -0.142 4.142 25 H 0.070 0.930 26 H 0.113 0.887 27 H 0.071 0.929 28 H 0.162 0.838 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.118 0.882 32 H 0.097 0.903 33 H 0.393 0.607 34 H -0.273 1.273 35 H -0.295 1.295 36 H 0.171 0.829 37 H 0.414 0.586 38 H 0.118 0.882 39 H 0.082 0.918 40 H 0.059 0.941 41 H 0.066 0.934 42 H 0.396 0.604 43 H 0.050 0.950 44 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.046 3.533 0.641 4.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.215 6.215 3 C 0.167 3.833 4 C -0.331 4.331 5 C 0.163 3.837 6 O -0.225 6.225 7 C -0.082 4.082 8 C -0.205 4.205 9 C -0.172 4.172 10 O -0.362 6.362 11 Si 0.680 3.320 12 C -0.007 4.007 13 C -0.231 4.231 14 C 0.352 3.648 15 O -0.448 6.448 16 N -0.358 5.358 17 C 0.012 3.988 18 H 0.108 0.892 19 C -0.159 4.159 20 C -0.131 4.131 21 H 0.101 0.899 22 C 0.007 3.993 23 O -0.410 6.410 24 C -0.181 4.181 25 H 0.089 0.911 26 H 0.131 0.869 27 H 0.090 0.910 28 H 0.179 0.821 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.137 0.863 32 H 0.115 0.885 33 H 0.242 0.758 34 H -0.199 1.199 35 H -0.223 1.223 36 H 0.187 0.813 37 H 0.253 0.747 38 H 0.136 0.864 39 H 0.101 0.899 40 H 0.077 0.923 41 H 0.084 0.916 42 H 0.246 0.754 43 H 0.069 0.931 44 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 1.523 3.133 -0.433 3.510 hybrid contribution -0.880 0.540 -0.055 1.034 sum 0.643 3.673 -0.488 3.761 Atomic orbital electron populations 1.23465 0.76580 1.05739 1.02602 1.86369 1.23163 1.25961 1.86051 1.19012 0.91242 0.84628 0.88460 1.21412 1.01975 0.90804 1.18928 1.18973 0.91085 0.84853 0.88746 1.86141 1.21060 1.28794 1.86541 1.23458 0.76318 1.05809 1.02593 1.19632 0.90838 0.96865 1.13195 1.25112 1.11592 0.91516 0.88995 1.86509 1.82667 1.50184 1.16821 0.94313 0.73396 0.81494 0.82761 1.20863 0.99794 0.88544 0.91489 1.19178 0.90735 0.93965 1.19182 1.18099 0.82823 0.88250 0.75653 1.90817 1.72478 1.30447 1.51034 1.45734 1.04839 1.10242 1.74977 1.22497 0.90588 0.87922 0.97769 0.89179 1.23331 0.92388 1.01849 0.98374 1.22305 0.93554 1.00238 0.96974 0.89877 1.22257 0.94747 0.91466 0.90818 1.86457 1.44960 1.51403 1.58164 1.23563 0.95896 1.01929 0.96673 0.91127 0.86909 0.91022 0.82113 0.91296 0.91245 0.86331 0.88499 0.75767 1.19875 1.22278 0.81267 0.74748 0.86353 0.89885 0.92294 0.91559 0.75441 0.93071 0.87945 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.11 16 2 O -0.30 -2.75 8.56 -68.85 -0.59 -3.34 16 3 C 0.22 1.39 6.70 22.82 0.15 1.55 16 4 C -0.31 -0.70 8.01 22.43 0.18 -0.52 16 5 C 0.21 0.63 6.67 22.61 0.15 0.78 16 6 O -0.31 -0.95 9.80 -90.33 -0.89 -1.84 16 7 C 0.01 -0.05 9.80 113.37 1.11 1.06 16 8 C -0.20 -0.13 5.27 -19.80 -0.10 -0.23 16 9 C -0.06 0.02 2.37 71.23 0.17 0.19 16 10 O -0.55 -0.35 12.88 -148.98 -1.92 -2.27 16 11 Si 0.78 -3.84 29.91 68.60 2.05 -1.78 16 12 C 0.01 -0.02 8.14 22.50 0.18 0.16 16 13 C -0.23 -1.07 5.89 -20.00 -0.12 -1.19 16 14 C 0.56 4.37 7.76 86.62 0.67 5.04 16 15 O -0.57 -9.78 14.75 16.88 0.25 -9.53 16 16 N -0.71 0.32 5.31 -443.15 -2.35 -2.03 16 17 C 0.12 0.06 4.24 45.57 0.19 0.25 16 18 H 0.09 0.58 7.46 -2.39 -0.02 0.56 16 19 C -0.12 0.68 7.40 31.12 0.23 0.91 16 20 C -0.11 0.21 4.00 -10.27 -0.04 0.17 16 21 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 22 C 0.08 -0.35 6.87 71.98 0.49 0.15 16 23 O -0.60 -0.28 13.66 -148.98 -2.04 -2.32 16 24 C -0.14 0.01 7.45 31.18 0.23 0.24 16 25 H 0.07 -0.26 7.66 -2.39 -0.02 -0.28 16 26 H 0.11 -0.26 8.14 -2.38 -0.02 -0.28 16 27 H 0.07 -0.27 7.66 -2.39 -0.02 -0.29 16 28 H 0.16 -0.40 4.50 -2.91 -0.01 -0.42 16 29 H 0.07 -0.44 7.65 -2.39 -0.02 -0.46 16 30 H 0.07 -0.43 7.65 -2.39 -0.02 -0.45 16 31 H 0.12 -0.83 8.14 -2.38 -0.02 -0.85 16 32 H 0.10 0.28 7.82 -2.38 -0.02 0.26 16 33 H 0.39 -3.22 8.70 -74.06 -0.64 -3.86 16 34 H -0.27 0.33 7.11 99.48 0.71 1.04 16 35 H -0.30 -0.82 7.11 99.48 0.71 -0.11 16 36 H 0.17 -1.66 3.44 -2.91 -0.01 -1.67 16 37 H 0.41 -3.47 6.75 -92.71 -0.63 -4.10 16 38 H 0.12 -1.31 8.08 -2.39 -0.02 -1.33 16 39 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 40 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 41 H 0.07 -0.52 7.88 -2.39 -0.02 -0.53 16 42 H 0.40 -3.22 9.12 -74.06 -0.68 -3.90 16 43 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 44 H 0.10 -0.35 7.92 -2.38 -0.02 -0.37 16 Total: 0.00 -29.32 360.55 -1.70 -31.02 By element: Atomic # 1 Polarization: -16.73 SS G_CDS: -0.84 Total: -17.57 kcal Atomic # 6 Polarization: 5.04 SS G_CDS: 4.62 Total: 9.66 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -2.35 Total: -2.03 kcal Atomic # 8 Polarization: -14.12 SS G_CDS: -5.18 Total: -19.30 kcal Atomic # 14 Polarization: -3.84 SS G_CDS: 2.05 Total: -1.78 kcal Total: -29.32 -1.70 -31.02 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_12297780.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.171 kcal (2) G-P(sol) polarization free energy of solvation -29.318 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.489 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.017 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.188 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds