Wall clock time and date at job start Sat Mar 6 2021 19:30:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47375 * 2 1 4 4 C 1.50709 * 109.46765 * 119.99743 * 2 1 3 5 5 C 1.38606 * 119.84025 * 75.00171 * 4 2 1 6 6 F 1.35103 * 119.92277 * 359.97438 * 5 4 2 7 7 C 1.38112 * 120.16517 * 179.97438 * 5 4 2 8 8 C 1.39618 * 119.85010 * 359.97438 * 7 5 4 9 9 C 1.47697 * 120.15671 * 179.97438 * 8 7 5 10 10 O 1.21571 * 119.99971 * 179.97438 * 9 8 7 11 11 N 1.34775 * 120.00032 * 359.97438 * 9 8 7 12 12 C 1.46497 * 120.00126 * 180.02562 * 11 9 8 13 13 H 1.09002 * 112.84935 * 25.32833 * 12 11 9 14 14 C 1.53786 * 113.61643 * 156.52505 * 12 11 9 15 15 C 1.53783 * 87.08050 * 140.06125 * 14 12 11 16 16 H 1.09005 * 113.60997 * 89.20380 * 15 14 12 17 17 C 1.52997 * 113.61545 * 220.02097 * 15 14 12 18 18 O 1.42895 * 109.47361 * 185.00585 * 17 15 14 19 19 C 1.53781 * 113.61305 * 254.13352 * 12 11 9 20 20 C 1.39846 * 119.68768 * 0.25062 * 8 7 5 21 21 F 1.35104 * 120.08012 * 179.75165 * 20 8 7 22 22 C 1.38230 * 119.84225 * 254.97342 * 4 2 1 23 23 H 0.96697 * 113.99930 * 60.00549 * 1 2 3 24 24 H 1.08996 * 109.47271 * 239.99434 * 2 1 3 25 25 H 1.48504 * 110.00054 * 59.99418 * 3 2 1 26 26 H 1.48494 * 110.00157 * 181.32203 * 3 2 1 27 27 H 1.08002 * 120.08016 * 180.02562 * 7 5 4 28 28 H 0.97006 * 119.99816 * 359.97438 * 11 9 8 29 29 H 1.08992 * 113.61675 * 254.61383 * 14 12 11 30 30 H 1.09005 * 113.61030 * 25.43033 * 14 12 11 31 31 H 1.09006 * 109.46955 * 304.99851 * 17 15 14 32 32 H 1.08999 * 109.47327 * 65.00182 * 17 15 14 33 33 H 0.96698 * 114.00495 * 179.97438 * 18 17 15 34 34 H 1.08999 * 113.61567 * 334.48111 * 19 12 11 35 35 H 1.08998 * 113.61196 * 105.38466 * 19 12 11 36 36 H 1.08000 * 119.92824 * 359.97438 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.8678 -2.0931 1.3029 6 9 1.3558 -2.7992 0.2711 7 6 2.3267 -2.7511 2.4272 8 6 2.8560 -2.0202 3.4926 9 6 3.3482 -2.7168 4.6984 10 8 3.8090 -2.0776 5.6241 11 7 3.2864 -4.0611 4.7724 12 6 3.7740 -4.7521 5.9686 13 1 3.7461 -4.1256 6.8602 14 6 3.1511 -6.1432 6.1735 15 6 4.5463 -6.6163 6.6144 16 1 4.7291 -6.5009 7.6828 17 6 4.9138 -8.0080 6.0957 18 8 6.1693 -8.4066 6.6494 19 6 5.1187 -5.4686 5.7609 20 6 2.9128 -0.6250 3.4149 21 9 3.4188 0.0903 4.4432 22 6 2.4536 0.0200 2.2815 23 1 -0.3933 0.4416 -0.7651 24 1 1.7924 -0.5139 -0.8899 25 1 1.5615 2.4679 1.2084 26 1 3.5346 1.7702 -0.0322 27 1 2.2769 -3.8286 2.4820 28 1 2.9183 -4.5711 4.0338 29 1 2.4073 -6.1756 6.9695 30 1 2.8032 -6.6060 5.2499 31 1 4.1438 -8.7208 6.3911 32 1 4.9878 -7.9828 5.0085 33 1 6.4654 -9.2816 6.3635 34 1 5.3091 -5.7481 4.7248 35 1 5.9622 -4.9568 6.2242 36 1 2.5009 1.0971 2.2181 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12366696_12360598.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:30:02 Heat of formation + Delta-G solvation = -147.986072 kcal Electronic energy + Delta-G solvation = -24082.705380 eV Core-core repulsion = 19977.580886 eV Total energy + Delta-G solvation = -4105.124494 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.101 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -50.30360 -50.19220 -41.67394 -40.44004 -39.47954 -37.64080 -37.27179 -35.01207 -33.31996 -31.55056 -29.09065 -27.72646 -26.76126 -24.62301 -24.37944 -22.90578 -21.90289 -20.89243 -19.59528 -18.82112 -18.61801 -18.54839 -18.22277 -17.60502 -17.30166 -17.21376 -16.62409 -16.41080 -16.29494 -16.11932 -15.78592 -15.60570 -15.37552 -15.28238 -14.79932 -14.37280 -13.98332 -13.90864 -13.66916 -13.52407 -13.46667 -13.16207 -12.74798 -12.43545 -12.34604 -12.12789 -11.78578 -11.50898 -11.30150 -10.81448 -10.76527 -10.43983 -10.25284 -9.96353 -5.02127 -0.95930 -0.48412 1.15452 1.23468 1.60415 1.75200 1.88358 2.08719 2.61322 2.69940 2.92698 3.15923 3.20682 3.33867 3.41821 3.56500 3.65091 3.72812 3.73875 3.96518 4.01627 4.18676 4.23051 4.35797 4.41419 4.45258 4.51308 4.60046 4.62227 4.66563 4.73371 4.78091 4.94389 5.01835 5.15996 5.22280 5.45953 6.23081 6.80614 6.89363 6.89872 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.086 4.086 3 Si 0.781 3.219 4 C -0.062 4.062 5 C 0.109 3.891 6 F -0.118 7.118 7 C -0.071 4.071 8 C -0.147 4.147 9 C 0.558 3.442 10 O -0.564 6.564 11 N -0.692 5.692 12 C 0.114 3.886 13 H 0.095 0.905 14 C -0.118 4.118 15 C -0.111 4.111 16 H 0.087 0.913 17 C 0.085 3.915 18 O -0.601 6.601 19 C -0.144 4.144 20 C 0.136 3.864 21 F -0.126 7.126 22 C -0.147 4.147 23 H 0.410 0.590 24 H 0.105 0.895 25 H -0.288 1.288 26 H -0.284 1.284 27 H 0.191 0.809 28 H 0.418 0.582 29 H 0.087 0.913 30 H 0.116 0.884 31 H 0.061 0.939 32 H 0.062 0.938 33 H 0.397 0.603 34 H 0.099 0.901 35 H 0.053 0.947 36 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.471 -4.430 -8.196 9.942 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.195 4.195 3 Si 0.686 3.314 4 C -0.063 4.063 5 C 0.089 3.911 6 F -0.097 7.097 7 C -0.090 4.090 8 C -0.152 4.152 9 C 0.345 3.655 10 O -0.443 6.443 11 N -0.344 5.344 12 C 0.010 3.990 13 H 0.113 0.887 14 C -0.156 4.156 15 C -0.130 4.130 16 H 0.105 0.895 17 C 0.007 3.993 18 O -0.409 6.409 19 C -0.182 4.182 20 C 0.115 3.885 21 F -0.104 7.104 22 C -0.166 4.166 23 H 0.262 0.738 24 H 0.123 0.877 25 H -0.215 1.215 26 H -0.211 1.211 27 H 0.208 0.792 28 H 0.258 0.742 29 H 0.106 0.894 30 H 0.134 0.866 31 H 0.080 0.920 32 H 0.080 0.920 33 H 0.246 0.754 34 H 0.117 0.883 35 H 0.072 0.928 36 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -2.640 -3.151 -6.300 7.523 hybrid contribution 0.187 -0.896 0.001 0.915 sum -2.452 -4.047 -6.299 7.879 Atomic orbital electron populations 1.86439 1.16031 1.82649 1.51744 1.24819 0.86959 1.11796 0.95907 0.93908 0.77802 0.74774 0.84922 1.19762 0.97867 0.92640 0.96066 1.17246 0.98876 0.88620 0.86333 1.91579 1.84264 1.77837 1.55977 1.21441 0.95266 1.02684 0.89595 1.19850 1.06401 0.91868 0.97045 1.18054 0.78300 0.83354 0.85763 1.90868 1.46664 1.67008 1.39767 1.45731 1.62822 1.04975 1.20907 1.22607 0.95549 0.92673 0.88189 0.88657 1.23303 0.95982 0.92385 1.03914 1.22361 0.96732 0.93597 1.00300 0.89451 1.22241 0.85236 0.94666 0.97126 1.86453 1.39113 1.41074 1.74302 1.23592 0.96746 0.96575 1.01335 1.17798 0.96467 0.88912 0.85337 1.91592 1.84096 1.77733 1.57005 1.20933 1.02154 1.01297 0.92183 0.73771 0.87712 1.21549 1.21071 0.79153 0.74244 0.89404 0.86559 0.92043 0.91988 0.75355 0.88297 0.92788 0.83223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.58 12.86 -148.98 -1.92 -0.33 16 2 C -0.09 0.27 2.43 71.24 0.17 0.44 16 3 Si 0.78 -3.39 30.18 68.60 2.07 -1.32 16 4 C -0.06 -0.13 5.30 -19.78 -0.10 -0.23 16 5 C 0.11 0.04 7.23 22.33 0.16 0.20 16 6 F -0.12 -0.05 16.73 44.97 0.75 0.70 16 7 C -0.07 0.16 9.52 22.57 0.21 0.38 16 8 C -0.15 -0.64 5.88 -20.06 -0.12 -0.76 16 9 C 0.56 3.94 7.77 86.74 0.67 4.62 16 10 O -0.56 -9.52 14.96 -3.94 -0.06 -9.58 16 11 N -0.69 0.88 5.31 -443.04 -2.35 -1.47 16 12 C 0.11 -0.01 4.21 45.52 0.19 0.18 16 13 H 0.10 0.51 7.50 -2.39 -0.02 0.49 16 14 C -0.12 0.71 7.39 31.12 0.23 0.94 16 15 C -0.11 0.22 4.02 -10.17 -0.04 0.18 16 16 H 0.09 0.11 8.14 -2.38 -0.02 0.09 16 17 C 0.08 -0.32 6.89 71.98 0.50 0.17 16 18 O -0.60 -0.46 13.66 -148.98 -2.03 -2.49 16 19 C -0.14 -0.01 7.45 31.21 0.23 0.22 16 20 C 0.14 1.14 7.28 22.66 0.17 1.31 16 21 F -0.13 -1.81 15.55 44.97 0.70 -1.11 16 22 C -0.15 -0.75 8.62 22.27 0.19 -0.56 16 23 H 0.41 -5.53 8.74 -74.06 -0.65 -6.18 16 24 H 0.11 -0.74 7.89 -2.39 -0.02 -0.76 16 25 H -0.29 -0.77 6.74 99.48 0.67 -0.10 16 26 H -0.28 -0.40 7.11 99.48 0.71 0.30 16 27 H 0.19 -2.08 6.40 -2.91 -0.02 -2.10 16 28 H 0.42 -3.81 6.74 -92.70 -0.63 -4.43 16 29 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 30 H 0.12 -1.29 8.07 -2.38 -0.02 -1.31 16 31 H 0.06 -0.39 8.14 -2.38 -0.02 -0.41 16 32 H 0.06 -0.42 7.85 -2.39 -0.02 -0.44 16 33 H 0.40 -3.11 9.12 -74.06 -0.68 -3.78 16 34 H 0.10 -0.26 7.90 -2.39 -0.02 -0.28 16 35 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 36 H 0.15 0.66 4.87 -2.91 -0.01 0.64 16 Total: 0.00 -25.95 314.74 -1.15 -27.10 By element: Atomic # 1 Polarization: -17.82 SS G_CDS: -0.77 Total: -18.59 kcal Atomic # 6 Polarization: 4.64 SS G_CDS: 2.47 Total: 7.10 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -2.35 Total: -1.47 kcal Atomic # 8 Polarization: -8.40 SS G_CDS: -4.01 Total: -12.41 kcal Atomic # 9 Polarization: -1.86 SS G_CDS: 1.45 Total: -0.41 kcal Atomic # 14 Polarization: -3.39 SS G_CDS: 2.07 Total: -1.32 kcal Total: -25.95 -1.15 -27.10 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_12360598.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.884 kcal (2) G-P(sol) polarization free energy of solvation -25.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.838 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.148 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.102 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds