Wall clock time and date at job start Sat Mar 6 2021 19:30:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35648 * 116.99691 * 2 1 4 4 C 1.40144 * 120.14871 * 179.97438 * 3 2 1 5 5 C 1.47534 * 120.18955 * 359.95218 * 4 3 2 6 6 O 1.21585 * 120.00072 * 0.02562 * 5 4 3 7 7 N 1.34779 * 119.99751 * 180.02562 * 5 4 3 8 8 C 1.46500 * 119.99895 * 180.02562 * 7 5 4 9 9 H 1.09008 * 112.90540 * 336.24622 * 8 7 5 10 10 C 1.53775 * 113.61656 * 107.50207 * 8 7 5 11 11 C 1.53779 * 87.08438 * 139.98199 * 10 8 7 12 12 H 1.09002 * 113.61731 * 89.11293 * 11 10 8 13 13 C 1.53000 * 113.69071 * 220.00724 * 11 10 8 14 14 O 1.42898 * 109.47043 * 274.06394 * 13 11 10 15 15 C 1.53777 * 113.61534 * 204.99945 * 8 7 5 16 16 C 1.39711 * 119.61838 * 180.23057 * 4 3 2 17 17 C 1.37790 * 119.90572 * 359.53703 * 16 4 3 18 18 C 1.50694 * 119.84966 * 180.18796 * 17 16 4 19 19 O 1.42897 * 109.47136 * 300.25419 * 18 17 16 20 20 Si 1.86299 * 109.47441 * 180.25205 * 18 17 16 21 21 C 1.38550 * 120.29885 * 0.43964 * 17 16 4 22 22 C 1.38054 * 120.39048 * 359.79377 * 21 17 16 23 23 H 1.09002 * 109.47063 * 179.97438 * 1 2 3 24 24 H 1.08997 * 109.47515 * 300.00192 * 1 2 3 25 25 H 1.09007 * 109.47132 * 60.00774 * 1 2 3 26 26 H 0.97002 * 120.00021 * 359.97438 * 7 5 4 27 27 H 1.08993 * 113.61636 * 25.42563 * 10 8 7 28 28 H 1.09008 * 113.61006 * 254.52805 * 10 8 7 29 29 H 1.09001 * 109.47043 * 34.05895 * 13 11 10 30 30 H 1.08992 * 109.47277 * 154.06065 * 13 11 10 31 31 H 0.96703 * 113.99884 * 180.02562 * 14 13 11 32 32 H 1.08997 * 113.61941 * 105.46412 * 15 8 7 33 33 H 1.09009 * 113.68972 * 334.57492 * 15 8 7 34 34 H 1.07994 * 120.04714 * 179.72053 * 16 4 3 35 35 H 1.09009 * 109.47112 * 60.25071 * 18 17 16 36 36 H 0.96696 * 113.99729 * 299.99961 * 19 18 17 37 37 H 1.48493 * 110.00126 * 180.02562 * 20 18 17 38 38 H 1.48504 * 109.99809 * 301.32421 * 20 18 17 39 39 H 1.07994 * 119.80223 * 179.76709 * 21 17 16 40 40 H 1.08001 * 119.95467 * 179.97438 * 22 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2857 0.0005 5 6 4.2550 0.0532 0.0022 6 8 3.7095 -1.0334 0.0026 7 7 5.6005 0.1318 0.0032 8 6 6.4057 -1.0920 0.0043 9 1 5.8708 -1.9515 0.4086 10 6 7.0993 -1.3742 -1.3388 11 6 8.3242 -1.8201 -0.5230 12 1 8.3139 -2.8786 -0.2628 13 6 9.6584 -1.3681 -1.1202 14 8 10.0911 -2.3200 -2.0942 15 6 7.8106 -0.9046 0.6008 16 6 4.0667 2.5364 0.0054 17 6 3.3037 3.6837 0.0000 18 6 3.9766 5.0321 0.0010 19 8 4.7913 5.1570 1.1684 20 14 2.6825 6.3721 0.0005 21 6 1.9205 3.6033 -0.0011 22 6 1.2924 2.3739 -0.0010 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8899 25 1 -0.3634 0.5137 -0.8901 26 1 6.0356 0.9987 0.0025 27 1 7.2746 -0.4796 -1.9362 28 1 6.6368 -2.1806 -1.9081 29 1 9.5330 -0.3947 -1.5943 30 1 10.4040 -1.2935 -0.3288 31 1 10.9329 -2.0974 -2.5149 32 1 7.9225 -1.3316 1.5974 33 1 8.1816 0.1183 0.5345 34 1 5.1446 2.6038 0.0104 35 1 4.5994 5.1280 -0.8885 36 1 4.3022 5.0816 1.9991 37 1 3.3333 7.7068 0.0009 38 1 1.8087 6.2339 -1.1923 39 1 1.3303 4.5077 -0.0015 40 1 0.2138 2.3195 -0.0015 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_12496546.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:30:05 Heat of formation + Delta-G solvation = -94.729244 kcal Electronic energy + Delta-G solvation = -23678.686620 eV Core-core repulsion = 20040.559656 eV Total energy + Delta-G solvation = -3638.126964 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.77931 -40.75318 -39.25533 -39.16012 -37.24263 -37.14634 -34.49904 -32.54365 -31.84902 -28.93144 -28.47242 -26.72296 -26.22837 -25.42342 -23.48596 -22.25124 -21.42062 -20.64829 -19.44505 -18.41815 -18.24569 -18.06960 -17.37111 -16.91112 -16.84311 -16.32095 -16.23201 -15.94053 -15.86844 -15.76868 -15.15932 -15.02001 -14.59261 -14.57099 -14.19416 -13.70536 -13.60795 -13.51281 -13.20028 -13.19611 -12.66540 -12.44887 -12.24236 -12.15711 -12.11066 -11.83709 -11.70952 -11.46375 -10.87914 -10.78581 -10.44033 -10.23739 -9.90034 -9.28016 -5.13059 -0.25671 0.18255 1.20128 1.53469 1.86745 1.90143 2.18893 2.22509 2.72656 3.14481 3.34082 3.43947 3.50797 3.59186 3.65293 3.65425 3.84426 3.95062 4.00781 4.06525 4.19111 4.19754 4.33120 4.35862 4.42127 4.45648 4.55034 4.56620 4.62456 4.65445 4.74763 4.81810 4.88953 5.04117 5.05930 5.09387 5.21873 5.33022 5.48652 5.62879 6.28655 6.47681 6.59506 6.67442 7.37576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.562 3.438 6 O -0.515 6.515 7 N -0.721 5.721 8 C 0.125 3.875 9 H 0.118 0.882 10 C -0.144 4.144 11 C -0.109 4.109 12 H 0.102 0.898 13 C 0.087 3.913 14 O -0.573 6.573 15 C -0.138 4.138 16 C -0.020 4.020 17 C -0.169 4.169 18 C -0.062 4.062 19 O -0.541 6.541 20 Si 0.686 3.314 21 C -0.048 4.048 22 C -0.214 4.214 23 H 0.105 0.895 24 H 0.059 0.941 25 H 0.058 0.942 26 H 0.398 0.602 27 H 0.084 0.916 28 H 0.075 0.925 29 H 0.046 0.954 30 H 0.048 0.952 31 H 0.380 0.620 32 H 0.080 0.920 33 H 0.088 0.912 34 H 0.135 0.865 35 H 0.114 0.886 36 H 0.380 0.620 37 H -0.253 1.253 38 H -0.257 1.257 39 H 0.134 0.866 40 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.645 4.205 2.153 4.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.349 3.651 6 O -0.391 6.391 7 N -0.373 5.373 8 C 0.020 3.980 9 H 0.136 0.864 10 C -0.183 4.183 11 C -0.128 4.128 12 H 0.120 0.880 13 C 0.009 3.991 14 O -0.378 6.378 15 C -0.177 4.177 16 C -0.039 4.039 17 C -0.170 4.170 18 C -0.173 4.173 19 O -0.346 6.346 20 Si 0.588 3.412 21 C -0.066 4.066 22 C -0.232 4.232 23 H 0.123 0.877 24 H 0.078 0.922 25 H 0.076 0.924 26 H 0.234 0.766 27 H 0.103 0.897 28 H 0.094 0.906 29 H 0.065 0.935 30 H 0.066 0.934 31 H 0.227 0.773 32 H 0.099 0.901 33 H 0.106 0.894 34 H 0.153 0.847 35 H 0.132 0.868 36 H 0.227 0.773 37 H -0.178 1.178 38 H -0.182 1.182 39 H 0.151 0.849 40 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.414 3.667 1.463 4.194 hybrid contribution 0.842 0.547 -0.541 1.141 sum -0.572 4.215 0.922 4.352 Atomic orbital electron populations 1.23240 0.78179 1.04782 1.01442 1.86386 1.21208 1.25185 1.86153 1.19098 0.90958 0.85065 0.90487 1.19364 0.90923 0.93940 1.13640 1.17987 0.81994 0.88644 0.76448 1.90842 1.71509 1.28611 1.48144 1.45887 1.05847 1.09416 1.76126 1.22490 0.89793 0.88646 0.97033 0.86376 1.23521 0.95788 1.01996 0.96962 1.22336 0.93112 1.00846 0.96475 0.87955 1.22143 0.95179 0.91127 0.90643 1.86499 1.43545 1.50236 1.57569 1.23364 0.94852 1.00549 0.98908 1.20955 0.99883 0.89839 0.93180 1.20121 0.93541 0.96019 1.07320 1.24958 1.01846 0.99245 0.91247 1.86495 1.37331 1.95379 1.15428 0.94779 0.80210 0.77632 0.88549 1.20992 0.93652 0.97333 0.94590 1.21234 1.00755 0.91567 1.09690 0.87650 0.92235 0.92355 0.76604 0.89742 0.90628 0.93549 0.93401 0.77268 0.90094 0.89351 0.84718 0.86820 0.77266 1.17827 1.18243 0.84909 0.84124 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.04 8.57 -40.52 -0.35 -1.39 16 3 C 0.19 0.47 6.70 -38.69 -0.26 0.21 16 4 C -0.17 -0.41 5.89 -104.84 -0.62 -1.03 16 5 C 0.56 2.24 7.76 -12.47 -0.10 2.15 16 6 O -0.52 -4.06 14.76 -16.59 -0.24 -4.31 16 7 N -0.72 -0.61 5.30 -54.06 -0.29 -0.90 16 8 C 0.13 0.10 4.24 -67.12 -0.28 -0.18 16 9 H 0.12 0.31 7.47 -51.92 -0.39 -0.08 16 10 C -0.14 -0.12 7.43 -25.92 -0.19 -0.31 16 11 C -0.11 0.01 4.01 -89.81 -0.36 -0.35 16 12 H 0.10 0.08 8.14 -51.93 -0.42 -0.35 16 13 C 0.09 -0.05 6.87 37.16 0.26 0.21 16 14 O -0.57 -0.64 13.66 -35.23 -0.48 -1.12 16 15 C -0.14 0.18 7.39 -25.92 -0.19 -0.01 16 16 C -0.02 0.00 9.08 -39.20 -0.36 -0.35 16 17 C -0.17 0.15 5.39 -104.67 -0.56 -0.42 16 18 C -0.06 0.10 2.81 36.00 0.10 0.20 16 19 O -0.54 0.70 12.76 -35.23 -0.45 0.25 16 20 Si 0.69 -1.45 29.77 -169.99 -5.06 -6.51 16 21 C -0.05 0.06 8.66 -39.53 -0.34 -0.28 16 22 C -0.21 0.06 9.03 -39.48 -0.36 -0.30 16 23 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 24 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 25 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 26 H 0.40 -0.68 6.76 -40.82 -0.28 -0.96 16 27 H 0.08 0.03 7.92 -51.93 -0.41 -0.38 16 28 H 0.07 0.17 8.14 -51.92 -0.42 -0.25 16 29 H 0.05 -0.07 7.88 -51.93 -0.41 -0.48 16 30 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 31 H 0.38 -1.18 9.12 45.56 0.42 -0.77 16 32 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.09 -0.23 8.08 -51.92 -0.42 -0.65 16 34 H 0.14 -0.26 6.40 -52.49 -0.34 -0.59 16 35 H 0.11 -0.15 7.96 -51.92 -0.41 -0.56 16 36 H 0.38 -1.85 8.70 45.56 0.40 -1.45 16 37 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 38 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 39 H 0.13 -0.45 4.85 -52.49 -0.25 -0.71 16 40 H 0.14 -0.35 6.30 -52.49 -0.33 -0.68 16 LS Contribution 331.58 15.07 5.00 5.00 Total: 0.00 -9.98 331.58 -8.68 -18.66 By element: Atomic # 1 Polarization: -5.66 SS G_CDS: -4.53 Total: -10.19 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: -2.27 Total: 0.52 kcal Atomic # 7 Polarization: -0.61 SS G_CDS: -0.29 Total: -0.90 kcal Atomic # 8 Polarization: -5.05 SS G_CDS: -1.52 Total: -6.57 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.06 Total: -6.51 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -9.98 -8.68 -18.66 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_12496546.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.069 kcal (2) G-P(sol) polarization free energy of solvation -9.982 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.661 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.729 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds