Wall clock time and date at job start Sat Mar 6 2021 19:30:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.46995 * 2 1 4 4 C 1.50701 * 109.47222 * 240.00402 * 2 1 3 5 5 C 1.35088 * 126.07958 * 104.01694 * 4 2 1 6 6 N 1.35035 * 107.98057 * 180.27654 * 5 4 2 7 7 C 1.46493 * 125.93112 * 179.74660 * 6 5 4 8 8 C 1.50702 * 109.47270 * 124.97707 * 7 6 5 9 9 O 1.21279 * 120.00025 * 359.97438 * 8 7 6 10 10 N 1.34776 * 120.00037 * 180.02562 * 8 7 6 11 11 C 1.46507 * 119.99720 * 179.97438 * 10 8 7 12 12 H 1.08996 * 112.84968 * 334.66617 * 11 10 8 13 13 C 1.53783 * 113.61070 * 105.86098 * 11 10 8 14 14 C 1.53960 * 87.01558 * 139.94932 * 13 11 10 15 15 H 1.09001 * 113.53520 * 89.18999 * 14 13 11 16 16 C 1.53001 * 113.74047 * 220.04997 * 14 13 11 17 17 O 1.42898 * 109.47627 * 272.59879 * 16 14 13 18 18 C 1.53769 * 87.11084 * 334.63657 * 14 13 11 19 19 N 1.40075 * 108.13633 * 359.74622 * 6 5 4 20 20 C 1.31619 * 108.11079 * 359.97438 * 19 6 5 21 21 C 1.48422 * 126.03788 * 179.97438 * 20 19 6 22 22 C 1.39327 * 120.11716 * 43.71636 * 21 20 19 23 23 C 1.38020 * 119.88134 * 179.97438 * 22 21 20 24 24 C 1.38325 * 120.11639 * 359.97438 * 23 22 21 25 25 C 1.38319 * 120.24278 * 0.02562 * 24 23 22 26 26 C 1.38026 * 120.12031 * 359.97438 * 25 24 23 27 27 H 0.96693 * 113.99630 * 299.99867 * 1 2 3 28 28 H 1.08998 * 109.47348 * 120.00110 * 2 1 3 29 29 H 1.48499 * 110.00185 * 299.99808 * 3 2 1 30 30 H 1.48496 * 109.99817 * 61.32202 * 3 2 1 31 31 H 1.08001 * 126.00543 * 0.02562 * 5 4 2 32 32 H 1.09003 * 109.47200 * 244.97045 * 7 6 5 33 33 H 1.08994 * 109.47375 * 4.97731 * 7 6 5 34 34 H 0.96997 * 120.00503 * 359.97438 * 10 8 7 35 35 H 1.09002 * 113.61400 * 254.52185 * 13 11 10 36 36 H 1.08991 * 113.61805 * 25.43414 * 13 11 10 37 37 H 1.08998 * 109.47347 * 32.60381 * 16 14 13 38 38 H 1.09001 * 109.46562 * 152.59782 * 16 14 13 39 39 H 0.96703 * 114.00329 * 180.02562 * 17 16 14 40 40 H 1.09009 * 113.61751 * 270.80840 * 18 14 13 41 41 H 1.08999 * 113.69239 * 139.92367 * 18 14 13 42 42 H 1.08007 * 120.05716 * 359.97438 * 22 21 20 43 43 H 1.07992 * 119.94364 * 180.25651 * 23 22 21 44 44 H 1.08000 * 119.87507 * 179.97438 * 24 23 22 45 45 H 1.07999 * 119.93971 * 179.97438 * 25 24 23 46 46 H 1.08000 * 120.06133 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.4459 -0.1238 -2.3333 6 7 2.7723 -1.0979 -3.2097 7 6 3.3572 -0.8986 -4.5379 8 6 4.6325 -1.6937 -4.6497 9 8 5.0155 -2.3607 -3.7119 10 7 5.3482 -1.6626 -5.7913 11 6 6.5883 -2.4351 -5.8997 12 1 7.0561 -2.6224 -4.9332 13 6 6.4559 -3.6932 -6.7741 14 6 7.8527 -3.3574 -7.3277 15 1 8.6666 -3.7983 -6.7520 16 6 7.9925 -3.5957 -8.8326 17 8 8.3756 -4.9523 -9.0667 18 6 7.5610 -1.8931 -6.9602 19 7 2.4545 -2.3320 -2.6282 20 6 1.9510 -2.1039 -1.4337 21 6 1.4801 -3.1331 -0.4735 22 6 2.2330 -4.2856 -0.2590 23 6 1.7908 -5.2393 0.6354 24 6 0.6028 -5.0520 1.3187 25 6 -0.1486 -3.9097 1.1096 26 6 0.2843 -2.9496 0.2174 27 1 -0.3932 0.4417 0.7650 28 1 1.7924 -0.5138 0.8899 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4585 1.2242 31 1 2.5702 0.9377 -2.4885 32 1 2.6526 -1.2335 -5.2992 33 1 3.5746 0.1593 -4.6842 34 1 5.0422 -1.1289 -6.5412 35 1 6.4232 -4.6208 -6.2026 36 1 5.6633 -3.6257 -7.5192 37 1 7.0389 -3.3978 -9.3219 38 1 8.7536 -2.9282 -9.2369 39 1 8.4833 -5.1749 -10.0015 40 1 7.0709 -1.3323 -7.7563 41 1 8.4182 -1.3681 -6.5388 42 1 3.1610 -4.4325 -0.7917 43 1 2.3757 -6.1310 0.8056 44 1 0.2602 -5.8010 2.0174 45 1 -1.0757 -3.7688 1.6454 46 1 -0.3034 -2.0583 0.0546 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_12622748.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:30:10 Heat of formation + Delta-G solvation = 25.805056 kcal Electronic energy + Delta-G solvation = -29270.299127 eV Core-core repulsion = 25129.475633 eV Total energy + Delta-G solvation = -4140.823494 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.36371 -41.19733 -39.76430 -39.41766 -37.76084 -37.30300 -34.81127 -34.47342 -32.24870 -31.68600 -31.32877 -29.39432 -28.25483 -26.83776 -25.84398 -24.34161 -23.28827 -23.12560 -21.75013 -21.43763 -20.91716 -20.47870 -18.51239 -18.40080 -18.37042 -18.16726 -17.57866 -17.06008 -16.71990 -16.42757 -16.10554 -15.82804 -15.76574 -15.47758 -15.34362 -14.98184 -14.83608 -14.65073 -14.33919 -14.17691 -13.87606 -13.83756 -13.62365 -13.59622 -13.36922 -13.23606 -12.78063 -12.64533 -12.36553 -12.25635 -11.96734 -11.83430 -11.75843 -11.56510 -11.43819 -11.05727 -10.92174 -10.46367 -10.28059 -10.12427 -9.64069 -9.56601 -9.16265 -4.93136 0.32984 0.71196 0.91023 1.24849 1.36562 1.47004 1.59514 1.83522 1.97479 2.05503 3.05556 3.08067 3.27864 3.36302 3.49978 3.56115 3.58961 3.68954 3.72938 3.82614 3.89279 3.90212 4.16344 4.24827 4.27609 4.28747 4.33668 4.43051 4.46808 4.50651 4.52867 4.63219 4.70084 4.71533 4.79605 4.91672 4.93541 4.96151 5.00723 5.18258 5.20141 5.37389 5.44224 5.49799 5.80694 5.82591 5.84540 5.91222 6.25813 6.32884 6.55204 6.61739 6.77326 7.08839 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.034 4.034 3 Si 0.681 3.319 4 C -0.203 4.203 5 C 0.065 3.935 6 N -0.359 5.359 7 C 0.116 3.884 8 C 0.500 3.500 9 O -0.503 6.503 10 N -0.720 5.720 11 C 0.125 3.875 12 H 0.117 0.883 13 C -0.144 4.144 14 C -0.109 4.109 15 H 0.102 0.898 16 C 0.087 3.913 17 O -0.573 6.573 18 C -0.137 4.137 19 N -0.249 5.249 20 C 0.132 3.868 21 C -0.018 4.018 22 C -0.089 4.089 23 C -0.125 4.125 24 C -0.113 4.113 25 C -0.126 4.126 26 C -0.095 4.095 27 H 0.376 0.624 28 H 0.074 0.926 29 H -0.254 1.254 30 H -0.259 1.259 31 H 0.178 0.822 32 H 0.117 0.883 33 H 0.129 0.871 34 H 0.402 0.598 35 H 0.076 0.924 36 H 0.085 0.915 37 H 0.046 0.954 38 H 0.048 0.952 39 H 0.381 0.619 40 H 0.089 0.911 41 H 0.081 0.919 42 H 0.125 0.875 43 H 0.124 0.876 44 H 0.122 0.878 45 H 0.124 0.876 46 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.997 5.229 -3.922 6.835 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.145 4.145 3 Si 0.582 3.418 4 C -0.214 4.214 5 C -0.080 4.080 6 N -0.140 5.140 7 C -0.010 4.010 8 C 0.283 3.717 9 O -0.375 6.375 10 N -0.373 5.373 11 C 0.021 3.979 12 H 0.135 0.865 13 C -0.182 4.182 14 C -0.128 4.128 15 H 0.121 0.879 16 C 0.009 3.991 17 O -0.379 6.379 18 C -0.175 4.175 19 N -0.069 5.069 20 C -0.034 4.034 21 C -0.020 4.020 22 C -0.109 4.109 23 C -0.143 4.143 24 C -0.131 4.131 25 C -0.145 4.145 26 C -0.114 4.114 27 H 0.224 0.776 28 H 0.092 0.908 29 H -0.179 1.179 30 H -0.184 1.184 31 H 0.195 0.805 32 H 0.135 0.865 33 H 0.146 0.854 34 H 0.236 0.764 35 H 0.094 0.906 36 H 0.104 0.896 37 H 0.065 0.935 38 H 0.066 0.934 39 H 0.228 0.772 40 H 0.107 0.893 41 H 0.099 0.901 42 H 0.143 0.857 43 H 0.142 0.858 44 H 0.140 0.860 45 H 0.142 0.858 46 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 2.535 4.430 -4.152 6.580 hybrid contribution -1.359 0.807 -0.115 1.584 sum 1.177 5.237 -4.266 6.857 Atomic orbital electron populations 1.86573 1.18488 1.79536 1.49694 1.23937 0.83669 1.09921 0.96956 0.95098 0.91622 0.74528 0.80551 1.19246 1.12252 0.92365 0.97570 1.22205 1.00471 0.95340 0.89936 1.47788 1.48696 1.04293 1.13251 1.21516 0.94325 1.02471 0.82648 1.20567 0.85325 0.82592 0.83171 1.90824 1.68965 1.40115 1.37599 1.45903 1.25059 1.50416 1.15935 1.22516 0.84211 0.91752 0.99460 0.86513 1.23551 0.96666 0.98806 0.99214 1.22368 0.98726 0.96271 0.95437 0.87928 1.22136 0.98373 0.83278 0.95282 1.86502 1.92027 1.28363 1.30968 1.23349 0.99566 0.96244 0.98379 1.77810 1.18831 1.01566 1.08664 1.20621 0.97918 0.92315 0.92554 1.17773 0.95527 0.92785 0.95947 1.21268 0.99648 0.92605 0.97345 1.21098 0.96853 0.99276 0.97109 1.21281 0.94921 0.97613 0.99286 1.21108 1.00114 0.94295 0.98939 1.21612 0.95094 0.99808 0.94920 0.77580 0.90827 1.17912 1.18401 0.80515 0.86482 0.85364 0.76387 0.90569 0.89642 0.93527 0.93387 0.77185 0.89272 0.90060 0.85670 0.85774 0.85997 0.85821 0.83820 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.60 10.40 -35.23 -0.37 -0.97 16 2 C -0.03 -0.03 2.16 36.01 0.08 0.05 16 3 Si 0.68 -0.59 30.81 -169.99 -5.24 -5.83 16 4 C -0.20 -0.64 5.38 -104.76 -0.56 -1.20 16 5 C 0.07 0.10 9.96 -17.26 -0.17 -0.08 16 6 N -0.36 -0.93 3.40 -62.59 -0.21 -1.14 16 7 C 0.12 -0.20 6.99 -5.20 -0.04 -0.24 16 8 C 0.50 0.41 7.86 -10.98 -0.09 0.32 16 9 O -0.50 -3.03 15.32 5.56 0.09 -2.94 16 10 N -0.72 1.58 5.36 -53.02 -0.28 1.29 16 11 C 0.13 -0.12 4.21 -67.12 -0.28 -0.41 16 12 H 0.12 0.13 7.50 -51.93 -0.39 -0.26 16 13 C -0.14 0.06 7.45 -25.82 -0.19 -0.14 16 14 C -0.11 0.12 4.01 -89.72 -0.36 -0.24 16 15 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 16 C 0.09 -0.13 6.89 37.16 0.26 0.13 16 17 O -0.57 -0.28 13.66 -35.23 -0.48 -0.76 16 18 C -0.14 0.41 7.39 -25.93 -0.19 0.22 16 19 N -0.25 -1.53 11.67 33.43 0.39 -1.14 16 20 C 0.13 0.72 6.66 -82.78 -0.55 0.17 16 21 C -0.02 -0.09 5.74 -104.89 -0.60 -0.69 16 22 C -0.09 -0.41 9.78 -39.26 -0.38 -0.80 16 23 C -0.13 -0.38 10.03 -39.63 -0.40 -0.77 16 24 C -0.11 -0.26 10.04 -39.52 -0.40 -0.65 16 25 C -0.13 -0.31 10.03 -39.63 -0.40 -0.71 16 26 C -0.10 -0.35 9.04 -39.26 -0.35 -0.71 16 27 H 0.38 -1.06 8.74 45.56 0.40 -0.66 16 28 H 0.07 0.04 7.96 -51.93 -0.41 -0.38 16 29 H -0.25 -0.27 7.02 56.52 0.40 0.13 16 30 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 31 H 0.18 -0.36 6.37 -52.49 -0.33 -0.70 16 32 H 0.12 -0.41 8.14 -51.93 -0.42 -0.84 16 33 H 0.13 -0.77 8.07 -51.93 -0.42 -1.19 16 34 H 0.40 -2.24 8.71 -40.82 -0.36 -2.60 16 35 H 0.08 0.12 8.14 -51.93 -0.42 -0.31 16 36 H 0.09 -0.08 7.91 -51.93 -0.41 -0.49 16 37 H 0.05 -0.12 7.86 -51.93 -0.41 -0.52 16 38 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.38 -1.42 9.12 45.56 0.42 -1.00 16 40 H 0.09 -0.40 8.07 -51.92 -0.42 -0.82 16 41 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 42 H 0.13 0.62 8.06 -52.48 -0.42 0.20 16 43 H 0.12 0.14 8.06 -52.49 -0.42 -0.29 16 44 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 45 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 46 H 0.14 0.48 5.34 -52.49 -0.28 0.20 16 LS Contribution 386.96 15.07 5.83 5.83 Total: 0.00 -12.70 386.96 -10.53 -23.24 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -5.62 Total: -11.84 kcal Atomic # 6 Polarization: -1.11 SS G_CDS: -4.63 Total: -5.74 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -0.11 Total: -0.99 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -0.76 Total: -4.67 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.24 Total: -5.83 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -12.70 -10.53 -23.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_12622748.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.042 kcal (2) G-P(sol) polarization free energy of solvation -12.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.337 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.237 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds