Wall clock time and date at job start Sat Mar 6 2021 19:30:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.46995 * 2 1 4 4 C 1.50701 * 109.47222 * 240.00402 * 2 1 3 5 5 C 1.35088 * 126.07958 * 104.01694 * 4 2 1 6 6 N 1.35035 * 107.98057 * 180.27654 * 5 4 2 7 7 C 1.46493 * 125.93112 * 179.74660 * 6 5 4 8 8 C 1.50702 * 109.47270 * 124.97707 * 7 6 5 9 9 O 1.21279 * 120.00025 * 359.97438 * 8 7 6 10 10 N 1.34776 * 120.00037 * 180.02562 * 8 7 6 11 11 C 1.46507 * 119.99720 * 179.97438 * 10 8 7 12 12 H 1.08996 * 112.84968 * 334.66617 * 11 10 8 13 13 C 1.53783 * 113.61070 * 105.86098 * 11 10 8 14 14 C 1.53960 * 87.01558 * 139.94932 * 13 11 10 15 15 H 1.09001 * 113.53520 * 89.18999 * 14 13 11 16 16 C 1.53001 * 113.74047 * 220.04997 * 14 13 11 17 17 O 1.42898 * 109.47627 * 272.59879 * 16 14 13 18 18 C 1.53769 * 87.11084 * 334.63657 * 14 13 11 19 19 N 1.40075 * 108.13633 * 359.74622 * 6 5 4 20 20 C 1.31619 * 108.11079 * 359.97438 * 19 6 5 21 21 C 1.48422 * 126.03788 * 179.97438 * 20 19 6 22 22 C 1.39327 * 120.11716 * 43.71636 * 21 20 19 23 23 C 1.38020 * 119.88134 * 179.97438 * 22 21 20 24 24 C 1.38325 * 120.11639 * 359.97438 * 23 22 21 25 25 C 1.38319 * 120.24278 * 0.02562 * 24 23 22 26 26 C 1.38026 * 120.12031 * 359.97438 * 25 24 23 27 27 H 0.96693 * 113.99630 * 299.99867 * 1 2 3 28 28 H 1.08998 * 109.47348 * 120.00110 * 2 1 3 29 29 H 1.48499 * 110.00185 * 299.99808 * 3 2 1 30 30 H 1.48496 * 109.99817 * 61.32202 * 3 2 1 31 31 H 1.08001 * 126.00543 * 0.02562 * 5 4 2 32 32 H 1.09003 * 109.47200 * 244.97045 * 7 6 5 33 33 H 1.08994 * 109.47375 * 4.97731 * 7 6 5 34 34 H 0.96997 * 120.00503 * 359.97438 * 10 8 7 35 35 H 1.09002 * 113.61400 * 254.52185 * 13 11 10 36 36 H 1.08991 * 113.61805 * 25.43414 * 13 11 10 37 37 H 1.08998 * 109.47347 * 32.60381 * 16 14 13 38 38 H 1.09001 * 109.46562 * 152.59782 * 16 14 13 39 39 H 0.96703 * 114.00329 * 180.02562 * 17 16 14 40 40 H 1.09009 * 113.61751 * 270.80840 * 18 14 13 41 41 H 1.08999 * 113.69239 * 139.92367 * 18 14 13 42 42 H 1.08007 * 120.05716 * 359.97438 * 22 21 20 43 43 H 1.07992 * 119.94364 * 180.25651 * 23 22 21 44 44 H 1.08000 * 119.87507 * 179.97438 * 24 23 22 45 45 H 1.07999 * 119.93971 * 179.97438 * 25 24 23 46 46 H 1.08000 * 120.06133 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.4459 -0.1238 -2.3333 6 7 2.7723 -1.0979 -3.2097 7 6 3.3572 -0.8986 -4.5379 8 6 4.6325 -1.6937 -4.6497 9 8 5.0155 -2.3607 -3.7119 10 7 5.3482 -1.6626 -5.7913 11 6 6.5883 -2.4351 -5.8997 12 1 7.0561 -2.6224 -4.9332 13 6 6.4559 -3.6932 -6.7741 14 6 7.8527 -3.3574 -7.3277 15 1 8.6666 -3.7983 -6.7520 16 6 7.9925 -3.5957 -8.8326 17 8 8.3756 -4.9523 -9.0667 18 6 7.5610 -1.8931 -6.9602 19 7 2.4545 -2.3320 -2.6282 20 6 1.9510 -2.1039 -1.4337 21 6 1.4801 -3.1331 -0.4735 22 6 2.2330 -4.2856 -0.2590 23 6 1.7908 -5.2393 0.6354 24 6 0.6028 -5.0520 1.3187 25 6 -0.1486 -3.9097 1.1096 26 6 0.2843 -2.9496 0.2174 27 1 -0.3932 0.4417 0.7650 28 1 1.7924 -0.5138 0.8899 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4585 1.2242 31 1 2.5702 0.9377 -2.4885 32 1 2.6526 -1.2335 -5.2992 33 1 3.5746 0.1593 -4.6842 34 1 5.0422 -1.1289 -6.5412 35 1 6.4232 -4.6208 -6.2026 36 1 5.6633 -3.6257 -7.5192 37 1 7.0389 -3.3978 -9.3219 38 1 8.7536 -2.9282 -9.2369 39 1 8.4833 -5.1749 -10.0015 40 1 7.0709 -1.3323 -7.7563 41 1 8.4182 -1.3681 -6.5388 42 1 3.1610 -4.4325 -0.7917 43 1 2.3757 -6.1310 0.8056 44 1 0.2602 -5.8010 2.0174 45 1 -1.0757 -3.7688 1.6454 46 1 -0.3034 -2.0583 0.0546 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12366696_12622748.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:30:09 Heat of formation + Delta-G solvation = 20.054128 kcal Electronic energy + Delta-G solvation = -29270.548506 eV Core-core repulsion = 25129.475633 eV Total energy + Delta-G solvation = -4141.072873 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.49056 -41.19485 -39.89717 -39.51836 -37.79015 -37.25988 -34.90685 -34.49965 -32.38042 -31.89058 -31.50351 -29.41059 -28.21793 -26.73802 -25.91482 -24.46770 -23.49429 -23.14585 -21.79440 -21.54059 -20.97000 -20.50934 -18.52484 -18.46286 -18.35813 -18.12830 -17.68565 -17.07741 -16.75346 -16.37386 -16.18980 -15.98857 -15.87653 -15.46975 -15.39057 -15.05921 -14.86718 -14.73543 -14.37936 -14.36342 -14.01746 -13.76999 -13.67344 -13.54652 -13.46909 -13.24160 -12.71642 -12.66245 -12.37461 -12.32634 -12.15490 -11.92815 -11.74474 -11.57574 -11.49499 -11.18578 -10.82369 -10.62325 -10.30019 -10.10607 -9.89120 -9.75184 -9.35029 -4.83652 0.09070 0.45764 0.80731 1.27171 1.40359 1.46220 1.63847 1.66068 1.98452 2.10280 2.85787 3.22044 3.30628 3.43048 3.57368 3.61990 3.68464 3.73234 3.78846 3.90545 4.01257 4.02637 4.09443 4.11078 4.14626 4.28487 4.39567 4.41612 4.43891 4.52574 4.60650 4.62547 4.68884 4.75382 4.77224 4.79680 4.85902 4.99217 4.99968 5.04902 5.14709 5.24282 5.30114 5.52947 5.56796 5.59899 5.62131 5.89553 6.04088 6.46994 6.57999 6.71403 6.88807 7.16624 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.048 4.048 3 Si 0.767 3.233 4 C -0.225 4.225 5 C 0.073 3.927 6 N -0.360 5.360 7 C 0.109 3.891 8 C 0.496 3.504 9 O -0.565 6.565 10 N -0.701 5.701 11 C 0.121 3.879 12 H 0.087 0.913 13 C -0.146 4.146 14 C -0.113 4.113 15 H 0.083 0.917 16 C 0.085 3.915 17 O -0.602 6.602 18 C -0.114 4.114 19 N -0.295 5.295 20 C 0.108 3.892 21 C -0.035 4.035 22 C -0.111 4.111 23 C -0.130 4.130 24 C -0.115 4.115 25 C -0.126 4.126 26 C -0.103 4.103 27 H 0.391 0.609 28 H 0.069 0.931 29 H -0.271 1.271 30 H -0.287 1.287 31 H 0.216 0.784 32 H 0.139 0.861 33 H 0.180 0.820 34 H 0.422 0.578 35 H 0.045 0.955 36 H 0.096 0.904 37 H 0.061 0.939 38 H 0.062 0.938 39 H 0.396 0.604 40 H 0.117 0.883 41 H 0.086 0.914 42 H 0.107 0.893 43 H 0.140 0.860 44 H 0.148 0.852 45 H 0.148 0.852 46 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.455 7.485 -5.038 9.139 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.157 4.157 3 Si 0.669 3.331 4 C -0.236 4.236 5 C -0.072 4.072 6 N -0.142 5.142 7 C -0.014 4.014 8 C 0.282 3.718 9 O -0.442 6.442 10 N -0.354 5.354 11 C 0.016 3.984 12 H 0.106 0.894 13 C -0.185 4.185 14 C -0.133 4.133 15 H 0.102 0.898 16 C 0.007 3.993 17 O -0.411 6.411 18 C -0.152 4.152 19 N -0.117 5.117 20 C -0.057 4.057 21 C -0.037 4.037 22 C -0.130 4.130 23 C -0.147 4.147 24 C -0.133 4.133 25 C -0.144 4.144 26 C -0.122 4.122 27 H 0.241 0.759 28 H 0.087 0.913 29 H -0.197 1.197 30 H -0.213 1.213 31 H 0.232 0.768 32 H 0.156 0.844 33 H 0.198 0.802 34 H 0.261 0.739 35 H 0.064 0.936 36 H 0.115 0.885 37 H 0.080 0.920 38 H 0.080 0.920 39 H 0.246 0.754 40 H 0.135 0.865 41 H 0.105 0.895 42 H 0.126 0.874 43 H 0.158 0.842 44 H 0.166 0.834 45 H 0.165 0.835 46 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 1.990 6.679 -5.326 8.771 hybrid contribution -1.195 0.042 0.199 1.212 sum 0.796 6.721 -5.128 8.491 Atomic orbital electron populations 1.86522 1.18770 1.80207 1.50752 1.24276 0.83679 1.11801 0.95948 0.94033 0.90286 0.70876 0.77881 1.19615 1.13225 0.91674 0.99106 1.22772 0.98820 0.96643 0.88961 1.48109 1.48137 1.03463 1.14456 1.22008 0.93008 1.05043 0.81352 1.21095 0.85955 0.81925 0.82867 1.90812 1.70649 1.42896 1.39883 1.45741 1.24128 1.49667 1.15861 1.22384 0.85164 0.92250 0.98649 0.89450 1.23566 0.97853 0.97725 0.99349 1.22364 0.97327 0.97680 0.95884 0.89844 1.22249 0.99573 0.82716 0.94718 1.86460 1.92238 1.29628 1.32738 1.23260 0.98986 0.95129 0.97846 1.77700 1.20234 1.04096 1.09634 1.20908 0.98399 0.93655 0.92732 1.18014 0.96176 0.93056 0.96471 1.21262 0.99558 0.93657 0.98514 1.21336 0.97471 0.99336 0.96601 1.21595 0.94332 0.98099 0.99272 1.21432 1.00816 0.93825 0.98320 1.21700 0.94777 1.00367 0.95361 0.75887 0.91332 1.19670 1.21318 0.76774 0.84360 0.80235 0.73919 0.93633 0.88532 0.92048 0.91959 0.75374 0.86477 0.89520 0.87435 0.84246 0.83438 0.83468 0.83736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.57 10.40 -148.98 -1.55 -3.12 16 2 C -0.05 -0.12 2.16 71.24 0.15 0.03 16 3 Si 0.77 -2.00 30.81 68.60 2.11 0.11 16 4 C -0.22 -1.66 5.38 -19.95 -0.11 -1.77 16 5 C 0.07 0.19 9.96 83.47 0.83 1.02 16 6 N -0.36 -2.01 3.40 -351.93 -1.20 -3.21 16 7 C 0.11 -0.50 6.99 85.63 0.60 0.10 16 8 C 0.50 1.10 7.86 87.66 0.69 1.79 16 9 O -0.57 -8.40 15.32 -3.03 -0.05 -8.45 16 10 N -0.70 3.35 5.36 -440.03 -2.36 0.99 16 11 C 0.12 -0.12 4.21 45.52 0.19 0.07 16 12 H 0.09 0.47 7.50 -2.39 -0.02 0.45 16 13 C -0.15 -0.10 7.45 31.18 0.23 0.13 16 14 C -0.11 0.19 4.01 -10.21 -0.04 0.15 16 15 H 0.08 0.17 8.14 -2.39 -0.02 0.15 16 16 C 0.08 -0.30 6.89 71.98 0.50 0.20 16 17 O -0.60 -0.83 13.66 -148.98 -2.04 -2.87 16 18 C -0.11 0.78 7.39 31.11 0.23 1.01 16 19 N -0.30 -4.38 11.67 -48.16 -0.56 -4.94 16 20 C 0.11 1.46 6.66 42.53 0.28 1.74 16 21 C -0.04 -0.45 5.74 -20.04 -0.11 -0.57 16 22 C -0.11 -1.38 9.78 22.48 0.22 -1.16 16 23 C -0.13 -0.99 10.03 22.24 0.22 -0.77 16 24 C -0.11 -0.55 10.04 22.31 0.22 -0.32 16 25 C -0.13 -0.66 10.03 22.24 0.22 -0.44 16 26 C -0.10 -0.93 9.04 22.48 0.20 -0.73 16 27 H 0.39 -2.06 8.74 -74.06 -0.65 -2.71 16 28 H 0.07 0.17 7.96 -2.39 -0.02 0.15 16 29 H -0.27 -0.05 7.02 99.48 0.70 0.65 16 30 H -0.29 -0.52 7.11 99.48 0.71 0.18 16 31 H 0.22 -1.39 6.37 -2.91 -0.02 -1.41 16 32 H 0.14 -1.21 8.14 -2.39 -0.02 -1.23 16 33 H 0.18 -2.78 8.07 -2.39 -0.02 -2.80 16 34 H 0.42 -5.64 8.71 -92.71 -0.81 -6.45 16 35 H 0.04 0.30 8.14 -2.39 -0.02 0.28 16 36 H 0.10 -0.18 7.91 -2.39 -0.02 -0.20 16 37 H 0.06 -0.40 7.86 -2.39 -0.02 -0.42 16 38 H 0.06 -0.39 8.14 -2.39 -0.02 -0.41 16 39 H 0.40 -2.91 9.12 -74.06 -0.68 -3.58 16 40 H 0.12 -1.42 8.07 -2.38 -0.02 -1.44 16 41 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 42 H 0.11 1.60 8.06 -2.91 -0.02 1.58 16 43 H 0.14 0.48 8.06 -2.91 -0.02 0.46 16 44 H 0.15 -0.11 8.06 -2.91 -0.02 -0.13 16 45 H 0.15 -0.01 8.06 -2.91 -0.02 -0.04 16 46 H 0.15 1.20 5.34 -2.91 -0.02 1.18 16 Total: 0.00 -35.19 386.96 -2.16 -37.35 By element: Atomic # 1 Polarization: -15.30 SS G_CDS: -1.06 Total: -16.37 kcal Atomic # 6 Polarization: -4.05 SS G_CDS: 4.54 Total: 0.49 kcal Atomic # 7 Polarization: -3.03 SS G_CDS: -4.12 Total: -7.15 kcal Atomic # 8 Polarization: -10.80 SS G_CDS: -3.63 Total: -14.43 kcal Atomic # 14 Polarization: -2.00 SS G_CDS: 2.11 Total: 0.11 kcal Total: -35.19 -2.16 -37.35 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_12622748.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.401 kcal (2) G-P(sol) polarization free energy of solvation -35.185 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.215 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.161 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.346 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.054 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds