Wall clock time and date at job start Sat Mar 6 2021 19:31:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50699 * 109.47158 * 240.00413 * 2 1 3 5 5 C 1.38271 * 119.94563 * 119.72381 * 4 2 1 6 6 C 1.38146 * 120.05540 * 179.72476 * 5 4 2 7 7 C 1.38728 * 119.94387 * 0.57065 * 6 5 4 8 8 O 1.35895 * 120.05690 * 179.67938 * 7 6 5 9 9 C 1.42897 * 117.00208 * 0.02633 * 8 7 6 10 10 C 1.50699 * 109.47708 * 180.02562 * 9 8 7 11 11 O 1.21282 * 119.99538 * 359.97438 * 10 9 8 12 12 N 1.34770 * 120.00519 * 180.02562 * 10 9 8 13 13 C 1.46499 * 120.00191 * 179.97438 * 12 10 9 14 14 H 1.08991 * 112.84901 * 23.79892 * 13 12 10 15 15 C 1.53780 * 113.61343 * 154.99679 * 13 12 10 16 16 C 1.53777 * 87.08209 * 139.97802 * 15 13 12 17 17 H 1.09006 * 113.61513 * 89.11519 * 16 15 13 18 18 C 1.52998 * 113.61797 * 220.01890 * 16 15 13 19 19 O 1.42907 * 109.47409 * 185.00037 * 18 16 15 20 20 C 1.53780 * 87.08312 * 334.56502 * 16 15 13 21 21 C 1.38735 * 119.89072 * 359.70511 * 7 6 5 22 22 C 1.38147 * 119.94145 * 359.97438 * 21 7 6 23 23 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 24 24 H 1.09000 * 109.47411 * 120.00061 * 2 1 3 25 25 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 26 26 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 27 27 H 1.08003 * 119.96765 * 359.97438 * 5 4 2 28 28 H 1.08003 * 120.02761 * 180.25084 * 6 5 4 29 29 H 1.09001 * 109.46870 * 299.99559 * 9 8 7 30 30 H 1.08995 * 109.47175 * 59.99163 * 9 8 7 31 31 H 0.97004 * 119.99891 * 359.97438 * 12 10 9 32 32 H 1.09001 * 113.61658 * 254.52420 * 15 13 12 33 33 H 1.08998 * 113.61997 * 25.34677 * 15 13 12 34 34 H 1.09007 * 109.46966 * 304.99560 * 18 16 15 35 35 H 1.08997 * 109.47071 * 64.99573 * 18 16 15 36 36 H 0.96699 * 113.99818 * 179.97438 * 19 18 16 37 37 H 1.08999 * 113.61476 * 270.88685 * 20 16 15 38 38 H 1.09001 * 113.61711 * 139.97614 * 20 16 15 39 39 H 1.07993 * 120.03312 * 179.97438 * 21 7 6 40 40 H 1.07997 * 119.97419 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7214 -0.0355 -2.1428 6 6 3.1879 -0.6861 -3.2687 7 6 2.8531 -2.0141 -3.4896 8 8 3.3053 -2.6544 -4.5997 9 6 4.1218 -1.8992 -5.4969 10 6 4.5253 -2.7674 -6.6607 11 8 4.1509 -3.9197 -6.7161 12 7 5.3030 -2.2638 -7.6394 13 6 5.6957 -3.1080 -8.7705 14 1 5.0082 -3.9368 -8.9388 15 6 6.0279 -2.3146 -10.0452 16 6 7.1883 -3.3002 -10.2619 17 1 6.9099 -4.1825 -10.8382 18 6 8.4694 -2.6364 -10.7706 19 8 9.4471 -3.6403 -11.0510 20 6 7.1748 -3.5283 -8.7411 21 6 2.0554 -2.6873 -2.5757 22 6 1.5970 -2.0342 -1.4480 23 1 -0.3934 0.4417 -0.7650 24 1 1.7923 -0.5138 0.8900 25 1 1.5614 2.4679 1.2086 26 1 3.5344 1.7704 -0.0321 27 1 2.9775 0.9999 -1.9728 28 1 3.8084 -0.1597 -3.9789 29 1 3.5603 -1.0396 -5.8630 30 1 5.0137 -1.5545 -4.9738 31 1 5.6028 -1.3423 -7.5950 32 1 5.2548 -2.3752 -10.8112 33 1 6.3522 -1.2922 -9.8512 34 1 8.2521 -2.0768 -11.6805 35 1 8.8538 -1.9574 -10.0095 36 1 10.2870 -3.2906 -11.3789 37 1 7.8139 -2.8381 -8.1904 38 1 7.3274 -4.5687 -8.4542 39 1 1.7931 -3.7210 -2.7457 40 1 0.9757 -2.5576 -0.7365 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_2989410.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:31:25 Heat of formation + Delta-G solvation = -96.270057 kcal Electronic energy + Delta-G solvation = -22523.249354 eV Core-core repulsion = 18885.055576 eV Total energy + Delta-G solvation = -3638.193779 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.64711 -41.03516 -39.79097 -38.85007 -37.33703 -37.09577 -34.66610 -32.42604 -31.76023 -30.12751 -28.46247 -26.85998 -26.24289 -24.30995 -23.37281 -22.31044 -21.70790 -20.75742 -19.54202 -18.52179 -18.29373 -18.07292 -17.51650 -17.43281 -16.84977 -16.49566 -16.37190 -16.00419 -15.75306 -15.60651 -15.23251 -15.13982 -14.71681 -14.49192 -14.26933 -13.79200 -13.69993 -13.63956 -13.52874 -13.30505 -12.81089 -12.39681 -12.23448 -12.12906 -12.06630 -11.85209 -11.74631 -11.58932 -10.97360 -10.87260 -10.43556 -10.17113 -10.06591 -9.22975 -5.07489 0.27156 0.28077 1.27971 1.41288 1.43777 1.59262 1.94850 2.51249 2.64532 3.04521 3.29538 3.42367 3.46814 3.52442 3.65372 3.67906 3.71032 3.84694 3.85448 3.87088 3.88545 4.24510 4.25729 4.31702 4.42548 4.45037 4.49394 4.50614 4.61785 4.62529 4.69373 4.88906 4.93198 4.97007 5.13052 5.15319 5.22962 5.41427 5.48802 5.66492 6.19994 6.34325 6.57606 6.59977 7.05411 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.687 3.313 4 C -0.157 4.157 5 C -0.076 4.076 6 C -0.206 4.206 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.516 3.484 11 O -0.511 6.511 12 N -0.718 5.718 13 C 0.124 3.876 14 H 0.120 0.880 15 C -0.138 4.138 16 C -0.109 4.109 17 H 0.103 0.897 18 C 0.087 3.913 19 O -0.573 6.573 20 C -0.144 4.144 21 C -0.145 4.145 22 C -0.051 4.051 23 H 0.379 0.621 24 H 0.113 0.887 25 H -0.255 1.255 26 H -0.259 1.259 27 H 0.129 0.871 28 H 0.132 0.868 29 H 0.096 0.904 30 H 0.095 0.905 31 H 0.402 0.598 32 H 0.081 0.919 33 H 0.089 0.911 34 H 0.048 0.952 35 H 0.047 0.953 36 H 0.381 0.619 37 H 0.086 0.914 38 H 0.076 0.924 39 H 0.136 0.864 40 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.347 7.104 -3.946 8.459 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.174 4.174 3 Si 0.589 3.411 4 C -0.158 4.158 5 C -0.094 4.094 6 C -0.225 4.225 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.301 3.699 11 O -0.385 6.385 12 N -0.371 5.371 13 C 0.019 3.981 14 H 0.137 0.863 15 C -0.176 4.176 16 C -0.128 4.128 17 H 0.122 0.878 18 C 0.009 3.991 19 O -0.379 6.379 20 C -0.183 4.183 21 C -0.164 4.164 22 C -0.069 4.069 23 H 0.226 0.774 24 H 0.130 0.870 25 H -0.180 1.180 26 H -0.184 1.184 27 H 0.147 0.853 28 H 0.149 0.851 29 H 0.114 0.886 30 H 0.112 0.888 31 H 0.237 0.763 32 H 0.100 0.900 33 H 0.108 0.892 34 H 0.066 0.934 35 H 0.065 0.935 36 H 0.228 0.772 37 H 0.104 0.896 38 H 0.095 0.905 39 H 0.154 0.846 40 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 2.105 5.942 -2.848 6.917 hybrid contribution 0.908 0.510 -0.087 1.045 sum 3.013 6.452 -2.934 7.702 Atomic orbital electron populations 1.86501 1.17177 1.81693 1.49261 1.24978 0.85185 1.09871 0.97416 0.94821 0.80805 0.78196 0.87247 1.20257 1.01893 0.95596 0.98049 1.20785 0.96287 0.99026 0.93264 1.21167 1.06232 0.94209 1.00908 1.19078 0.94272 0.91086 0.86718 1.86177 1.64270 1.38656 1.30933 1.22484 0.96399 0.94575 0.90460 1.20080 0.78545 0.88108 0.83185 1.90790 1.53189 1.17586 1.76900 1.45810 1.52524 1.15887 1.22868 1.22567 0.96226 0.94694 0.84578 0.86264 1.23366 0.98052 0.98869 0.97301 1.22340 0.93868 0.99821 0.96766 0.87833 1.22141 0.88415 0.89846 0.98679 1.86502 1.26932 1.35871 1.88567 1.23540 0.96066 1.03043 0.95659 1.20545 1.00388 1.01293 0.94164 1.20860 0.96773 0.93425 0.95834 0.77382 0.86969 1.18004 1.18400 0.85325 0.85067 0.88630 0.88750 0.76294 0.89985 0.89226 0.93357 0.93512 0.77174 0.89585 0.90491 0.84620 0.84733 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.13 12.77 -35.23 -0.45 -0.58 16 2 C -0.06 0.02 2.82 36.01 0.10 0.12 16 3 Si 0.69 -0.89 29.78 -169.99 -5.06 -5.95 16 4 C -0.16 -0.03 5.39 -104.60 -0.56 -0.59 16 5 C -0.08 0.06 8.66 -39.60 -0.34 -0.29 16 6 C -0.21 0.11 9.04 -39.43 -0.36 -0.24 16 7 C 0.13 0.21 6.69 -39.22 -0.26 -0.05 16 8 O -0.29 -0.78 9.67 -39.32 -0.38 -1.16 16 9 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 10 C 0.52 0.61 7.91 -10.99 -0.09 0.53 16 11 O -0.51 -3.27 16.10 -14.35 -0.23 -3.50 16 12 N -0.72 1.45 5.35 -53.02 -0.28 1.16 16 13 C 0.12 -0.13 4.24 -67.12 -0.28 -0.42 16 14 H 0.12 0.11 7.46 -51.93 -0.39 -0.27 16 15 C -0.14 0.42 7.39 -25.92 -0.19 0.23 16 16 C -0.11 0.15 4.01 -89.81 -0.36 -0.21 16 17 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 18 C 0.09 -0.15 6.89 37.16 0.26 0.10 16 19 O -0.57 -0.11 13.66 -35.23 -0.48 -0.59 16 20 C -0.14 0.12 7.43 -25.92 -0.19 -0.07 16 21 C -0.15 -0.25 9.99 -39.43 -0.39 -0.64 16 22 C -0.05 -0.05 9.60 -39.60 -0.38 -0.43 16 23 H 0.38 -1.37 8.70 45.56 0.40 -0.97 16 24 H 0.11 0.03 7.96 -51.93 -0.41 -0.39 16 25 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 26 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 27 H 0.13 -0.36 4.87 -52.48 -0.26 -0.61 16 28 H 0.13 -0.44 6.30 -52.48 -0.33 -0.77 16 29 H 0.10 -0.39 7.66 -51.93 -0.40 -0.78 16 30 H 0.09 -0.35 7.66 -51.93 -0.40 -0.75 16 31 H 0.40 -2.19 8.73 -40.82 -0.36 -2.54 16 32 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 33 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 34 H 0.05 -0.13 8.14 -51.92 -0.42 -0.55 16 35 H 0.05 -0.13 7.84 -51.93 -0.41 -0.54 16 36 H 0.38 -1.52 9.12 45.56 0.42 -1.11 16 37 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 38 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 39 H 0.14 0.18 8.06 -52.49 -0.42 -0.24 16 40 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 LS Contribution 337.79 15.07 5.09 5.09 Total: 0.00 -10.75 337.79 -9.37 -20.12 By element: Atomic # 1 Polarization: -8.07 SS G_CDS: -4.70 Total: -12.77 kcal Atomic # 6 Polarization: 1.05 SS G_CDS: -2.87 Total: -1.82 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -0.28 Total: 1.16 kcal Atomic # 8 Polarization: -4.29 SS G_CDS: -1.54 Total: -5.83 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.06 Total: -5.95 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -10.75 -9.37 -20.12 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_2989410.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.154 kcal (2) G-P(sol) polarization free energy of solvation -10.749 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.903 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.367 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.270 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds