Wall clock time and date at job start Sat Mar 6 2021 19:31:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86295 * 109.47182 * 2 1 4 4 C 1.50704 * 109.47219 * 239.99680 * 2 1 3 5 5 C 1.38249 * 119.96746 * 120.00115 * 4 2 1 6 6 C 1.38284 * 120.10741 * 180.02562 * 5 4 2 7 7 C 1.38125 * 120.05583 * 0.02562 * 6 5 4 8 8 C 1.38747 * 119.94866 * 359.97438 * 7 6 5 9 9 O 1.35895 * 120.06122 * 180.02562 * 8 7 6 10 10 C 1.42897 * 116.99831 * 0.02562 * 9 8 7 11 11 C 1.52999 * 109.47332 * 179.97438 * 10 9 8 12 12 C 1.53002 * 109.47272 * 180.02562 * 11 10 9 13 13 C 1.50706 * 109.46980 * 180.02562 * 12 11 10 14 14 O 1.21283 * 120.00003 * 359.97438 * 13 12 11 15 15 N 1.34769 * 119.99945 * 179.97438 * 13 12 11 16 16 C 1.46497 * 120.00274 * 179.97438 * 15 13 12 17 17 H 1.09002 * 112.90477 * 336.24972 * 16 15 13 18 18 C 1.53779 * 113.61581 * 107.50145 * 16 15 13 19 19 C 1.53779 * 87.08402 * 139.98450 * 18 16 15 20 20 H 1.09000 * 113.61527 * 89.11480 * 19 18 16 21 21 C 1.53000 * 113.61731 * 220.02348 * 19 18 16 22 22 O 1.42904 * 109.46797 * 272.49576 * 21 19 18 23 23 C 1.53784 * 113.61569 * 204.99925 * 16 15 13 24 24 C 1.38156 * 119.97194 * 300.25656 * 4 2 1 25 25 H 0.96706 * 113.99445 * 60.00291 * 1 2 3 26 26 H 1.09001 * 109.46667 * 119.99641 * 2 1 3 27 27 H 1.48505 * 110.00457 * 59.99718 * 3 2 1 28 28 H 1.48503 * 110.00358 * 181.31555 * 3 2 1 29 29 H 1.07999 * 119.94857 * 0.02562 * 5 4 2 30 30 H 1.08002 * 119.97354 * 179.97438 * 6 5 4 31 31 H 1.07998 * 120.02714 * 179.97438 * 7 6 5 32 32 H 1.09005 * 109.47273 * 59.99735 * 10 9 8 33 33 H 1.08997 * 109.47200 * 300.00270 * 10 9 8 34 34 H 1.09005 * 109.47013 * 59.99753 * 11 10 9 35 35 H 1.09000 * 109.46896 * 300.00139 * 11 10 9 36 36 H 1.08991 * 109.47306 * 59.99785 * 12 11 10 37 37 H 1.09001 * 109.46599 * 299.99778 * 12 11 10 38 38 H 0.97009 * 120.00192 * 359.97438 * 15 13 12 39 39 H 1.09006 * 113.61307 * 25.43652 * 18 16 15 40 40 H 1.09007 * 113.61642 * 254.53409 * 18 16 15 41 41 H 1.09003 * 109.47303 * 32.48927 * 21 19 18 42 42 H 1.08993 * 109.47406 * 152.49206 * 21 19 18 43 43 H 0.96703 * 114.00131 * 179.97438 * 22 21 19 44 44 H 1.09004 * 113.61451 * 105.47149 * 23 16 15 45 45 H 1.08994 * 113.61477 * 334.56451 * 23 16 15 46 46 H 1.07996 * 120.03105 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7262 -0.0380 -2.1400 6 6 3.1884 -0.6870 -3.2703 7 6 2.8563 -2.0090 -3.4934 8 6 2.0588 -2.6862 -2.5821 9 8 1.7311 -3.9870 -2.7990 10 6 2.2430 -4.5957 -3.9862 11 6 1.7726 -6.0498 -4.0575 12 6 2.3213 -6.7016 -5.3283 13 6 1.8573 -8.1338 -5.3988 14 8 1.1572 -8.5884 -4.5189 15 7 2.2204 -8.9093 -6.4395 16 6 1.7700 -10.3016 -6.5078 17 1 1.5206 -10.7152 -5.5306 18 6 0.6904 -10.5482 -7.5748 19 6 1.4143 -11.8679 -7.8895 20 1 1.0677 -12.7098 -7.2901 21 6 1.4819 -12.1887 -9.3840 22 8 0.3055 -12.9012 -9.7718 23 6 2.6908 -11.2067 -7.3431 24 6 1.5930 -2.0316 -1.4511 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5138 0.8900 27 1 1.5615 2.4680 1.2085 28 1 3.5347 1.7703 -0.0320 29 1 2.9867 0.9958 -1.9676 30 1 3.8088 -0.1594 -3.9797 31 1 3.2171 -2.5153 -4.3765 32 1 3.3325 -4.5671 -3.9684 33 1 1.8796 -4.0527 -4.8586 34 1 0.6831 -6.0788 -4.0751 35 1 2.1364 -6.5925 -3.1850 36 1 3.4106 -6.6727 -5.3103 37 1 1.9577 -6.1590 -6.2009 38 1 2.7801 -8.5455 -7.1434 39 1 0.7150 -9.8304 -8.3948 40 1 -0.3088 -10.6860 -7.1614 41 1 1.5485 -11.2609 -9.9521 42 1 2.3606 -12.8015 -9.5847 43 1 0.2799 -13.1378 -10.7091 44 1 3.3066 -11.8763 -6.7426 45 1 3.2621 -10.6691 -8.0997 46 1 0.9690 -2.5554 -0.7421 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12366696_4549616.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:31:32 Heat of formation + Delta-G solvation = -116.835668 kcal Electronic energy + Delta-G solvation = -25595.911182 eV Core-core repulsion = 21645.750373 eV Total energy + Delta-G solvation = -3950.160809 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.36866 -41.17536 -39.75133 -39.15327 -37.32386 -37.24351 -34.92234 -34.47353 -32.44376 -31.25572 -29.25405 -27.94904 -26.81307 -26.72154 -24.16839 -23.65592 -22.71079 -21.83503 -21.51370 -20.56573 -19.18765 -18.30650 -18.07979 -17.83051 -17.47507 -17.38151 -17.11705 -16.81740 -16.41097 -16.39423 -16.11882 -15.44616 -15.39008 -15.24058 -14.80419 -14.64108 -14.47112 -14.19298 -14.18256 -13.52240 -13.46061 -13.32181 -13.19077 -13.04383 -12.74383 -12.70822 -12.32782 -12.28435 -12.24487 -11.97327 -11.73751 -11.62120 -11.58943 -11.48670 -10.95564 -10.79595 -10.51113 -10.05911 -9.90914 -9.24191 -4.98978 0.21914 0.41080 1.29797 1.58201 1.64858 1.91097 1.99885 2.39512 2.69001 3.22979 3.44397 3.49923 3.61096 3.66871 3.68866 3.78659 3.85242 3.88201 3.97687 4.01051 4.11473 4.20582 4.25342 4.34202 4.40261 4.41379 4.41785 4.46163 4.53375 4.61844 4.63680 4.67746 4.69122 4.79270 4.79964 4.99061 4.99711 5.00484 5.05428 5.15725 5.27896 5.29949 5.39057 5.45675 5.56635 5.75285 6.43314 6.54016 6.74081 6.89020 7.24949 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.085 4.085 3 Si 0.794 3.206 4 C -0.085 4.085 5 C -0.160 4.160 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.116 3.884 9 O -0.340 6.340 10 C 0.058 3.942 11 C -0.103 4.103 12 C -0.126 4.126 13 C 0.507 3.493 14 O -0.593 6.593 15 N -0.706 5.706 16 C 0.114 3.886 17 H 0.087 0.913 18 C -0.143 4.143 19 C -0.115 4.115 20 H 0.083 0.917 21 C 0.085 3.915 22 O -0.601 6.601 23 C -0.118 4.118 24 C -0.153 4.153 25 H 0.395 0.605 26 H 0.101 0.899 27 H -0.301 1.301 28 H -0.281 1.281 29 H 0.148 0.852 30 H 0.160 0.840 31 H 0.154 0.846 32 H 0.084 0.916 33 H 0.086 0.914 34 H 0.058 0.942 35 H 0.057 0.943 36 H 0.130 0.870 37 H 0.129 0.871 38 H 0.420 0.580 39 H 0.098 0.902 40 H 0.049 0.951 41 H 0.063 0.937 42 H 0.060 0.940 43 H 0.397 0.603 44 H 0.082 0.918 45 H 0.115 0.885 46 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.562 3.480 -11.043 13.309 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.194 4.194 3 Si 0.699 3.301 4 C -0.086 4.086 5 C -0.178 4.178 6 C -0.089 4.089 7 C -0.224 4.224 8 C 0.070 3.930 9 O -0.254 6.254 10 C -0.016 4.016 11 C -0.141 4.141 12 C -0.166 4.166 13 C 0.295 3.705 14 O -0.474 6.474 15 N -0.358 5.358 16 C 0.009 3.991 17 H 0.106 0.894 18 C -0.182 4.182 19 C -0.134 4.134 20 H 0.102 0.898 21 C 0.008 3.992 22 O -0.410 6.410 23 C -0.156 4.156 24 C -0.172 4.172 25 H 0.245 0.755 26 H 0.119 0.881 27 H -0.229 1.229 28 H -0.207 1.207 29 H 0.166 0.834 30 H 0.178 0.822 31 H 0.172 0.828 32 H 0.102 0.898 33 H 0.104 0.896 34 H 0.077 0.923 35 H 0.076 0.924 36 H 0.148 0.852 37 H 0.147 0.853 38 H 0.258 0.742 39 H 0.117 0.883 40 H 0.068 0.932 41 H 0.081 0.919 42 H 0.078 0.922 43 H 0.246 0.754 44 H 0.101 0.899 45 H 0.133 0.867 46 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 6.383 3.361 -8.731 11.326 hybrid contribution 0.048 -1.088 -0.261 1.119 sum 6.431 2.274 -8.992 11.286 Atomic orbital electron populations 1.86474 1.17377 1.82303 1.50438 1.25409 0.85295 1.11803 0.96865 0.93499 0.77733 0.74302 0.84548 1.20217 0.97850 0.93475 0.97016 1.21192 1.00443 1.00737 0.95427 1.21319 0.97302 0.93538 0.96790 1.21607 1.02691 0.96898 1.01213 1.19212 0.95232 0.83553 0.94960 1.86055 1.71692 1.22920 1.44779 1.22992 0.99653 0.93052 0.85892 1.21161 1.01527 0.93086 0.98326 1.21540 1.04691 0.90415 0.99907 1.21296 0.78979 0.89425 0.80811 1.90737 1.39888 1.76162 1.40600 1.45880 1.53301 1.11563 1.25065 1.22410 0.96375 0.81781 0.98581 0.89443 1.23526 0.98067 0.97491 0.99123 1.22344 0.97869 0.97045 0.96107 0.89820 1.22243 0.87212 0.95875 0.93880 1.86459 1.43508 1.78126 1.32901 1.23281 0.95712 0.97554 0.99080 1.20312 1.04155 0.94974 0.97750 0.75467 0.88121 1.22892 1.20746 0.83441 0.82205 0.82813 0.89825 0.89631 0.92328 0.92378 0.85232 0.85263 0.74170 0.88311 0.93190 0.91922 0.92154 0.75367 0.89920 0.86687 0.86829 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.88 12.76 -148.98 -1.90 -3.78 16 2 C -0.08 -0.18 2.82 71.24 0.20 0.02 16 3 Si 0.79 -1.34 29.79 68.60 2.04 0.70 16 4 C -0.09 -0.24 5.39 -19.88 -0.11 -0.35 16 5 C -0.16 0.20 8.67 22.28 0.19 0.39 16 6 C -0.07 0.20 10.04 22.25 0.22 0.43 16 7 C -0.21 0.16 9.04 22.36 0.20 0.36 16 8 C 0.12 0.60 6.69 22.51 0.15 0.75 16 9 O -0.34 -2.22 10.14 -92.37 -0.94 -3.15 16 10 C 0.06 -0.13 4.74 71.98 0.34 0.21 16 11 C -0.10 -0.06 4.87 30.59 0.15 0.09 16 12 C -0.13 0.82 5.70 29.85 0.17 0.99 16 13 C 0.51 0.95 7.83 87.66 0.69 1.64 16 14 O -0.59 -8.11 15.58 -3.04 -0.05 -8.16 16 15 N -0.71 2.72 5.35 -440.04 -2.36 0.37 16 16 C 0.11 -0.05 4.24 45.52 0.19 0.15 16 17 H 0.09 0.51 7.47 -2.39 -0.02 0.50 16 18 C -0.14 -0.01 7.43 31.12 0.23 0.22 16 19 C -0.11 0.17 4.01 -10.27 -0.04 0.13 16 20 H 0.08 0.18 8.14 -2.39 -0.02 0.16 16 21 C 0.09 -0.30 6.88 71.98 0.50 0.19 16 22 O -0.60 -0.61 13.66 -148.98 -2.04 -2.65 16 23 C -0.12 0.68 7.39 31.12 0.23 0.91 16 24 C -0.15 -1.06 9.55 22.37 0.21 -0.85 16 25 H 0.40 -2.04 8.70 -74.05 -0.64 -2.68 16 26 H 0.10 0.42 7.96 -2.39 -0.02 0.40 16 27 H -0.30 -1.77 7.11 99.48 0.71 -1.07 16 28 H -0.28 -0.59 7.11 99.48 0.71 0.12 16 29 H 0.15 -0.87 4.87 -2.91 -0.01 -0.88 16 30 H 0.16 -1.44 8.06 -2.91 -0.02 -1.47 16 31 H 0.15 -1.00 6.30 -2.91 -0.02 -1.01 16 32 H 0.08 -0.52 7.66 -2.38 -0.02 -0.54 16 33 H 0.09 -0.56 7.66 -2.39 -0.02 -0.57 16 34 H 0.06 0.32 8.10 -2.38 -0.02 0.30 16 35 H 0.06 0.32 8.10 -2.39 -0.02 0.30 16 36 H 0.13 -1.60 8.14 -2.39 -0.02 -1.62 16 37 H 0.13 -1.59 8.14 -2.39 -0.02 -1.61 16 38 H 0.42 -4.91 8.73 -92.70 -0.81 -5.72 16 39 H 0.10 -0.29 7.90 -2.38 -0.02 -0.30 16 40 H 0.05 0.25 8.14 -2.38 -0.02 0.23 16 41 H 0.06 -0.42 7.84 -2.39 -0.02 -0.44 16 42 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 43 H 0.40 -3.06 9.12 -74.06 -0.68 -3.73 16 44 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 45 H 0.11 -1.24 8.08 -2.39 -0.02 -1.26 16 46 H 0.11 1.10 8.06 -2.91 -0.02 1.08 16 Total: 0.00 -29.30 380.24 -2.78 -32.08 By element: Atomic # 1 Polarization: -19.63 SS G_CDS: -1.08 Total: -20.71 kcal Atomic # 6 Polarization: 1.76 SS G_CDS: 3.53 Total: 5.29 kcal Atomic # 7 Polarization: 2.72 SS G_CDS: -2.36 Total: 0.37 kcal Atomic # 8 Polarization: -12.82 SS G_CDS: -4.92 Total: -17.74 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: 2.04 Total: 0.70 kcal Total: -29.30 -2.78 -32.08 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4549616.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.754 kcal (2) G-P(sol) polarization free energy of solvation -29.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.055 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.082 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.836 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds