Wall clock time and date at job start Sat Mar 6 2021 19:31:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50699 * 109.47158 * 240.00413 * 2 1 3 5 5 C 1.38271 * 119.94563 * 119.72381 * 4 2 1 6 6 C 1.38146 * 120.05540 * 179.72476 * 5 4 2 7 7 C 1.38728 * 119.94387 * 0.57065 * 6 5 4 8 8 O 1.35895 * 120.05690 * 179.67938 * 7 6 5 9 9 C 1.42897 * 117.00208 * 0.02633 * 8 7 6 10 10 C 1.50699 * 109.47708 * 180.02562 * 9 8 7 11 11 C 1.36415 * 125.80639 * 89.99000 * 10 9 8 12 12 C 1.47381 * 127.19053 * 359.96637 * 11 10 9 13 13 O 1.21622 * 119.99714 * 359.97438 * 12 11 10 14 14 N 1.34766 * 120.00201 * 179.97438 * 12 11 10 15 15 C 1.46499 * 120.00396 * 179.97438 * 14 12 11 16 16 H 1.08998 * 112.84835 * 336.19926 * 15 14 12 17 17 C 1.53779 * 113.61402 * 107.50291 * 15 14 12 18 18 C 1.53782 * 87.08376 * 139.98747 * 17 15 14 19 19 H 1.09002 * 113.69481 * 89.12353 * 18 17 15 20 20 C 1.52998 * 113.61520 * 220.02144 * 18 17 15 21 21 O 1.42901 * 109.46968 * 272.49276 * 20 18 17 22 22 C 1.53779 * 113.61839 * 205.00230 * 15 14 12 23 23 C 1.47013 * 105.61676 * 179.97438 * 11 10 9 24 24 C 1.34178 * 105.95624 * 0.02562 * 23 11 10 25 25 O 1.33657 * 125.79801 * 269.69233 * 10 9 8 26 26 C 1.38735 * 119.89072 * 359.70511 * 7 6 5 27 27 C 1.38147 * 119.94145 * 359.97438 * 26 7 6 28 28 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 29 29 H 1.09000 * 109.47411 * 120.00061 * 2 1 3 30 30 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 31 31 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 32 32 H 1.08003 * 119.96765 * 359.97438 * 5 4 2 33 33 H 1.08003 * 120.02761 * 180.25084 * 6 5 4 34 34 H 1.09001 * 109.46870 * 299.99559 * 9 8 7 35 35 H 1.08995 * 109.47175 * 59.99163 * 9 8 7 36 36 H 0.97001 * 119.99795 * 0.02562 * 14 12 11 37 37 H 1.09011 * 113.61182 * 254.53166 * 17 15 14 38 38 H 1.08996 * 113.61893 * 25.43597 * 17 15 14 39 39 H 1.09001 * 109.47039 * 32.48940 * 20 18 17 40 40 H 1.08999 * 109.47263 * 152.48722 * 20 18 17 41 41 H 0.96701 * 113.99774 * 179.97438 * 21 20 18 42 42 H 1.09002 * 113.61220 * 334.56229 * 22 15 14 43 43 H 1.09001 * 113.61662 * 105.38493 * 22 15 14 44 44 H 1.08004 * 127.02387 * 180.02562 * 23 11 10 45 45 H 1.08000 * 125.43559 * 180.02562 * 24 23 11 46 46 H 1.07993 * 120.03312 * 179.97438 * 26 7 6 47 47 H 1.07997 * 119.97419 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7214 -0.0355 -2.1428 6 6 3.1879 -0.6861 -3.2687 7 6 2.8531 -2.0141 -3.4896 8 8 3.3053 -2.6544 -4.5997 9 6 4.1218 -1.8992 -5.4969 10 6 4.5253 -2.7674 -6.6607 11 6 3.8355 -2.9068 -7.8294 12 6 2.5688 -2.2509 -8.1998 13 8 2.0276 -1.4898 -7.4207 14 7 2.0102 -2.4944 -9.4018 15 6 0.7507 -1.8429 -9.7699 16 1 0.1636 -1.5371 -8.9040 17 6 0.9147 -0.7379 -10.8267 18 6 -0.3870 -1.2583 -11.4589 19 1 -1.2864 -0.7921 -11.0564 20 6 -0.3609 -1.2765 -12.9886 21 8 -0.7881 -0.0073 -13.4874 22 6 -0.0602 -2.6189 -10.8210 23 6 4.6197 -3.8481 -8.6419 24 6 5.6858 -4.1788 -7.8973 25 8 5.6229 -3.5274 -6.7256 26 6 2.0554 -2.6873 -2.5757 27 6 1.5970 -2.0342 -1.4480 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5138 0.8900 30 1 1.5614 2.4679 1.2086 31 1 3.5344 1.7704 -0.0321 32 1 2.9775 0.9999 -1.9728 33 1 3.8084 -0.1597 -3.9789 34 1 3.5603 -1.0396 -5.8630 35 1 5.0137 -1.5545 -4.9738 36 1 2.4417 -3.1017 -10.0231 37 1 0.8303 0.2704 -10.4210 38 1 1.7909 -0.8676 -11.4619 39 1 0.6534 -1.4792 -13.3323 40 1 -1.0307 -2.0548 -13.3542 41 1 -0.7959 0.0536 -14.4524 42 1 0.5496 -3.2630 -11.4547 43 1 -0.9307 -3.1306 -10.4105 44 1 4.3855 -4.2014 -9.6353 45 1 6.4718 -4.8568 -8.1955 46 1 1.7931 -3.7210 -2.7457 47 1 0.9757 -2.5576 -0.7365 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:31:44 Heat of formation + Delta-G solvation = -77.350103 kcal Electronic energy + Delta-G solvation = -31270.276860 eV Core-core repulsion = 26774.005279 eV Total energy + Delta-G solvation = -4496.271580 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.75129 -41.19962 -41.10261 -39.50612 -39.09192 -37.29196 -37.09406 -34.74317 -33.82237 -32.79973 -31.90265 -31.31516 -29.06778 -27.79962 -26.80464 -26.10866 -25.05171 -23.74555 -23.20997 -22.28939 -21.81524 -21.36664 -20.46531 -19.39616 -19.14360 -18.29505 -18.18575 -17.46236 -17.32282 -17.20885 -16.85958 -16.67478 -16.41833 -16.31354 -15.90233 -15.88288 -15.73356 -15.43436 -15.22351 -14.84519 -14.61017 -14.43915 -14.20165 -14.15559 -13.94385 -13.59354 -13.53554 -13.45840 -13.40678 -13.07487 -12.75660 -12.31594 -12.11267 -12.00032 -11.97393 -11.80268 -11.64869 -11.54207 -10.98398 -10.97496 -10.88712 -10.35158 -10.09135 -9.95076 -9.86308 -9.10673 -4.98223 0.02983 0.38637 0.40445 0.91132 1.36367 1.48483 1.67330 2.01781 2.11317 2.17299 2.53005 2.76136 3.08637 3.28260 3.37436 3.54575 3.55213 3.60682 3.66342 3.74342 3.76281 3.85024 3.92465 3.93687 3.98578 4.15577 4.29540 4.30428 4.34969 4.36551 4.48253 4.51383 4.53431 4.57478 4.57730 4.67503 4.72478 4.74684 4.77816 4.95512 5.00913 5.03454 5.08659 5.23651 5.24765 5.35616 5.50938 5.58198 5.77861 5.83819 6.37491 6.44964 6.62552 6.65431 7.17896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.062 4.062 3 Si 0.686 3.314 4 C -0.159 4.159 5 C -0.075 4.075 6 C -0.202 4.202 7 C 0.142 3.858 8 O -0.304 6.304 9 C 0.135 3.865 10 C 0.065 3.935 11 C -0.211 4.211 12 C 0.590 3.410 13 O -0.532 6.532 14 N -0.712 5.712 15 C 0.124 3.876 16 H 0.120 0.880 17 C -0.143 4.143 18 C -0.109 4.109 19 H 0.103 0.897 20 C 0.087 3.913 21 O -0.573 6.573 22 C -0.139 4.139 23 C -0.196 4.196 24 C -0.015 4.015 25 O -0.165 6.165 26 C -0.148 4.148 27 C -0.052 4.052 28 H 0.379 0.621 29 H 0.112 0.888 30 H -0.255 1.255 31 H -0.259 1.259 32 H 0.129 0.871 33 H 0.132 0.868 34 H 0.117 0.883 35 H 0.083 0.917 36 H 0.401 0.599 37 H 0.076 0.924 38 H 0.085 0.915 39 H 0.046 0.954 40 H 0.048 0.952 41 H 0.381 0.619 42 H 0.088 0.912 43 H 0.081 0.919 44 H 0.161 0.839 45 H 0.214 0.786 46 H 0.133 0.867 47 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.875 -1.706 -7.117 7.555 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.173 4.173 3 Si 0.588 3.412 4 C -0.159 4.159 5 C -0.093 4.093 6 C -0.220 4.220 7 C 0.097 3.903 8 O -0.218 6.218 9 C 0.061 3.939 10 C 0.012 3.988 11 C -0.215 4.215 12 C 0.378 3.622 13 O -0.410 6.410 14 N -0.362 5.362 15 C 0.019 3.981 16 H 0.138 0.862 17 C -0.182 4.182 18 C -0.127 4.127 19 H 0.121 0.879 20 C 0.009 3.991 21 O -0.379 6.379 22 C -0.177 4.177 23 C -0.216 4.216 24 C -0.081 4.081 25 O -0.061 6.061 26 C -0.167 4.167 27 C -0.070 4.070 28 H 0.227 0.773 29 H 0.130 0.870 30 H -0.180 1.180 31 H -0.184 1.184 32 H 0.146 0.854 33 H 0.150 0.850 34 H 0.134 0.866 35 H 0.101 0.899 36 H 0.236 0.764 37 H 0.095 0.905 38 H 0.103 0.897 39 H 0.065 0.935 40 H 0.066 0.934 41 H 0.228 0.772 42 H 0.106 0.894 43 H 0.100 0.900 44 H 0.179 0.821 45 H 0.231 0.769 46 H 0.151 0.849 47 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.193 -0.968 -4.769 5.337 hybrid contribution 0.558 -1.142 -1.251 1.783 sum 2.751 -2.109 -6.020 6.947 Atomic orbital electron populations 1.86487 1.17220 1.81717 1.49291 1.24956 0.85150 1.09829 0.97395 0.94729 0.80905 0.78384 0.87146 1.20227 1.02031 0.95597 0.98081 1.20778 0.96261 0.98973 0.93247 1.21181 1.06012 0.94191 1.00649 1.18954 0.94022 0.91115 0.86212 1.86083 1.64720 1.39716 1.31239 1.21109 0.95183 0.91518 0.86106 1.21953 0.86196 0.94963 0.95722 1.21236 0.98746 1.05120 0.96419 1.17213 0.82977 0.80534 0.81492 1.90799 1.63086 1.36639 1.50491 1.45742 1.24803 1.48290 1.17354 1.22550 0.84840 0.93680 0.97040 0.86249 1.23528 0.97477 0.99670 0.97525 1.22339 0.99508 0.97070 0.93828 0.87853 1.22143 0.98040 0.85365 0.93543 1.86499 1.90344 1.34452 1.26560 1.23369 1.00581 0.96495 0.97250 1.22885 0.95968 1.01021 1.01679 1.24060 1.01438 0.99066 0.83565 1.83800 1.38902 1.46740 1.36609 1.20490 1.00692 1.01126 0.94388 1.20815 0.96858 0.93452 0.95861 0.77348 0.87038 1.18031 1.18374 0.85366 0.85025 0.86564 0.89894 0.76401 0.90525 0.89672 0.93542 0.93393 0.77216 0.89355 0.90030 0.82113 0.76932 0.84921 0.84859 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.64 12.77 -35.23 -0.45 -1.09 16 2 C -0.06 -0.05 2.82 36.01 0.10 0.05 16 3 Si 0.69 -0.12 29.78 -169.99 -5.06 -5.18 16 4 C -0.16 -0.22 5.39 -104.60 -0.56 -0.79 16 5 C -0.08 -0.07 8.66 -39.60 -0.34 -0.42 16 6 C -0.20 -0.33 9.04 -39.43 -0.36 -0.69 16 7 C 0.14 0.45 6.69 -39.22 -0.26 0.19 16 8 O -0.30 -1.17 10.12 -19.41 -0.20 -1.37 16 9 C 0.14 0.24 4.74 36.01 0.17 0.42 16 10 C 0.06 0.14 7.00 -34.97 -0.24 -0.10 16 11 C -0.21 -0.34 6.31 -103.28 -0.65 -0.99 16 12 C 0.59 1.52 7.81 -12.54 -0.10 1.42 16 13 O -0.53 -2.96 14.44 5.26 0.08 -2.88 16 14 N -0.71 0.27 5.35 -54.11 -0.29 -0.02 16 15 C 0.12 -0.05 4.24 -67.12 -0.28 -0.33 16 16 H 0.12 0.16 7.46 -51.93 -0.39 -0.22 16 17 C -0.14 0.07 7.43 -25.92 -0.19 -0.12 16 18 C -0.11 0.11 4.01 -89.80 -0.36 -0.25 16 19 H 0.10 -0.01 8.14 -51.93 -0.42 -0.44 16 20 C 0.09 -0.12 6.88 37.16 0.26 0.13 16 21 O -0.57 -0.19 13.66 -35.23 -0.48 -0.67 16 22 C -0.14 0.32 7.39 -25.92 -0.19 0.12 16 23 C -0.20 0.26 10.60 -37.46 -0.40 -0.14 16 24 C -0.01 0.02 12.03 29.30 0.35 0.37 16 25 O -0.17 -0.22 10.52 7.65 0.08 -0.14 16 26 C -0.15 -0.40 9.99 -39.43 -0.39 -0.79 16 27 C -0.05 -0.10 9.60 -39.60 -0.38 -0.48 16 28 H 0.38 -0.94 8.70 45.56 0.40 -0.54 16 29 H 0.11 0.12 7.96 -51.93 -0.41 -0.30 16 30 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 31 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 32 H 0.13 -0.13 4.87 -52.48 -0.26 -0.39 16 33 H 0.13 -0.04 6.30 -52.48 -0.33 -0.37 16 34 H 0.12 0.23 6.00 -51.93 -0.31 -0.08 16 35 H 0.08 -0.03 7.66 -51.93 -0.40 -0.42 16 36 H 0.40 -1.19 7.90 -40.82 -0.32 -1.51 16 37 H 0.08 0.06 8.14 -51.92 -0.42 -0.36 16 38 H 0.08 -0.09 7.90 -51.93 -0.41 -0.50 16 39 H 0.05 -0.11 7.84 -51.93 -0.41 -0.52 16 40 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.38 -1.47 9.12 45.56 0.42 -1.05 16 42 H 0.09 -0.32 8.08 -51.93 -0.42 -0.74 16 43 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 44 H 0.16 -0.70 7.74 -52.48 -0.41 -1.11 16 45 H 0.21 -1.15 8.06 -52.49 -0.42 -1.58 16 46 H 0.13 0.24 8.06 -52.49 -0.42 -0.18 16 47 H 0.13 0.13 8.06 -52.49 -0.42 -0.29 16 LS Contribution 395.78 15.07 5.96 5.96 Total: 0.00 -10.41 395.78 -9.61 -20.01 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -5.41 Total: -12.22 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -3.84 Total: -2.40 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.29 Total: -0.02 kcal Atomic # 8 Polarization: -5.18 SS G_CDS: -0.97 Total: -6.15 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.06 Total: -5.18 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -10.41 -9.61 -20.01 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.336 kcal (2) G-P(sol) polarization free energy of solvation -10.407 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.607 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.014 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.350 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds