Wall clock time and date at job start Sat Mar 6 2021 19:31:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50699 * 109.47158 * 240.00413 * 2 1 3 5 5 C 1.38271 * 119.94563 * 119.72381 * 4 2 1 6 6 C 1.38146 * 120.05540 * 179.72476 * 5 4 2 7 7 C 1.38728 * 119.94387 * 0.57065 * 6 5 4 8 8 O 1.35895 * 120.05690 * 179.67938 * 7 6 5 9 9 C 1.42897 * 117.00208 * 0.02633 * 8 7 6 10 10 C 1.50699 * 109.47708 * 180.02562 * 9 8 7 11 11 C 1.36415 * 125.80639 * 89.99000 * 10 9 8 12 12 C 1.47381 * 127.19053 * 359.96637 * 11 10 9 13 13 O 1.21622 * 119.99714 * 359.97438 * 12 11 10 14 14 N 1.34766 * 120.00201 * 179.97438 * 12 11 10 15 15 C 1.46499 * 120.00396 * 179.97438 * 14 12 11 16 16 H 1.08998 * 112.84835 * 336.19926 * 15 14 12 17 17 C 1.53779 * 113.61402 * 107.50291 * 15 14 12 18 18 C 1.53782 * 87.08376 * 139.98747 * 17 15 14 19 19 H 1.09002 * 113.69481 * 89.12353 * 18 17 15 20 20 C 1.52998 * 113.61520 * 220.02144 * 18 17 15 21 21 O 1.42901 * 109.46968 * 272.49276 * 20 18 17 22 22 C 1.53779 * 113.61839 * 205.00230 * 15 14 12 23 23 C 1.47013 * 105.61676 * 179.97438 * 11 10 9 24 24 C 1.34178 * 105.95624 * 0.02562 * 23 11 10 25 25 O 1.33657 * 125.79801 * 269.69233 * 10 9 8 26 26 C 1.38735 * 119.89072 * 359.70511 * 7 6 5 27 27 C 1.38147 * 119.94145 * 359.97438 * 26 7 6 28 28 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 29 29 H 1.09000 * 109.47411 * 120.00061 * 2 1 3 30 30 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 31 31 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 32 32 H 1.08003 * 119.96765 * 359.97438 * 5 4 2 33 33 H 1.08003 * 120.02761 * 180.25084 * 6 5 4 34 34 H 1.09001 * 109.46870 * 299.99559 * 9 8 7 35 35 H 1.08995 * 109.47175 * 59.99163 * 9 8 7 36 36 H 0.97001 * 119.99795 * 0.02562 * 14 12 11 37 37 H 1.09011 * 113.61182 * 254.53166 * 17 15 14 38 38 H 1.08996 * 113.61893 * 25.43597 * 17 15 14 39 39 H 1.09001 * 109.47039 * 32.48940 * 20 18 17 40 40 H 1.08999 * 109.47263 * 152.48722 * 20 18 17 41 41 H 0.96701 * 113.99774 * 179.97438 * 21 20 18 42 42 H 1.09002 * 113.61220 * 334.56229 * 22 15 14 43 43 H 1.09001 * 113.61662 * 105.38493 * 22 15 14 44 44 H 1.08004 * 127.02387 * 180.02562 * 23 11 10 45 45 H 1.08000 * 125.43559 * 180.02562 * 24 23 11 46 46 H 1.07993 * 120.03312 * 179.97438 * 26 7 6 47 47 H 1.07997 * 119.97419 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7214 -0.0355 -2.1428 6 6 3.1879 -0.6861 -3.2687 7 6 2.8531 -2.0141 -3.4896 8 8 3.3053 -2.6544 -4.5997 9 6 4.1218 -1.8992 -5.4969 10 6 4.5253 -2.7674 -6.6607 11 6 3.8355 -2.9068 -7.8294 12 6 2.5688 -2.2509 -8.1998 13 8 2.0276 -1.4898 -7.4207 14 7 2.0102 -2.4944 -9.4018 15 6 0.7507 -1.8429 -9.7699 16 1 0.1636 -1.5371 -8.9040 17 6 0.9147 -0.7379 -10.8267 18 6 -0.3870 -1.2583 -11.4589 19 1 -1.2864 -0.7921 -11.0564 20 6 -0.3609 -1.2765 -12.9886 21 8 -0.7881 -0.0073 -13.4874 22 6 -0.0602 -2.6189 -10.8210 23 6 4.6197 -3.8481 -8.6419 24 6 5.6858 -4.1788 -7.8973 25 8 5.6229 -3.5274 -6.7256 26 6 2.0554 -2.6873 -2.5757 27 6 1.5970 -2.0342 -1.4480 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5138 0.8900 30 1 1.5614 2.4679 1.2086 31 1 3.5344 1.7704 -0.0321 32 1 2.9775 0.9999 -1.9728 33 1 3.8084 -0.1597 -3.9789 34 1 3.5603 -1.0396 -5.8630 35 1 5.0137 -1.5545 -4.9738 36 1 2.4417 -3.1017 -10.0231 37 1 0.8303 0.2704 -10.4210 38 1 1.7909 -0.8676 -11.4619 39 1 0.6534 -1.4792 -13.3323 40 1 -1.0307 -2.0548 -13.3542 41 1 -0.7959 0.0536 -14.4524 42 1 0.5496 -3.2630 -11.4547 43 1 -0.9307 -3.1306 -10.4105 44 1 4.3855 -4.2014 -9.6353 45 1 6.4718 -4.8568 -8.1955 46 1 1.7931 -3.7210 -2.7457 47 1 0.9757 -2.5576 -0.7365 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12366696_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:31:43 Heat of formation + Delta-G solvation = -80.790300 kcal Electronic energy + Delta-G solvation = -31270.426038 eV Core-core repulsion = 26774.005279 eV Total energy + Delta-G solvation = -4496.420759 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -43.72946 -41.32553 -41.14462 -39.57424 -39.21301 -37.25149 -37.17638 -34.83097 -33.82223 -32.84145 -31.99933 -31.40173 -29.02114 -27.81969 -26.71978 -26.20398 -25.09089 -23.84441 -23.15383 -22.39828 -21.82244 -21.38738 -20.42437 -19.52906 -19.13476 -18.28130 -18.18943 -17.53717 -17.35435 -17.22701 -16.97531 -16.75683 -16.38957 -16.34891 -15.97745 -15.95130 -15.79209 -15.50904 -15.20809 -14.86368 -14.68906 -14.45244 -14.35516 -14.20229 -13.85985 -13.62962 -13.54848 -13.47224 -13.38964 -13.12987 -12.70058 -12.30737 -12.25560 -12.10272 -12.07817 -11.76421 -11.73107 -11.46803 -11.13408 -10.97623 -10.79058 -10.42786 -10.12804 -10.08346 -9.83151 -9.25933 -4.99932 -0.05266 0.24338 0.26904 1.02586 1.32283 1.50499 1.62065 1.94691 2.04528 2.12635 2.45390 2.62405 3.24176 3.33209 3.44276 3.53568 3.58978 3.65861 3.67468 3.72690 3.78162 3.81084 3.89102 3.92659 4.03090 4.09866 4.26830 4.39937 4.42684 4.44309 4.45069 4.49129 4.60094 4.63728 4.64927 4.70175 4.79419 4.80342 4.81168 4.92897 5.01157 5.05978 5.11758 5.22647 5.24908 5.27508 5.45009 5.53747 5.66298 5.87838 6.23299 6.45063 6.76812 6.91029 7.10576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.069 4.069 3 Si 0.772 3.228 4 C -0.160 4.160 5 C -0.076 4.076 6 C -0.205 4.205 7 C 0.124 3.876 8 O -0.322 6.322 9 C 0.135 3.865 10 C 0.039 3.961 11 C -0.223 4.223 12 C 0.583 3.417 13 O -0.572 6.572 14 N -0.696 5.696 15 C 0.117 3.883 16 H 0.095 0.905 17 C -0.141 4.141 18 C -0.111 4.111 19 H 0.088 0.912 20 C 0.085 3.915 21 O -0.600 6.600 22 C -0.121 4.121 23 C -0.196 4.196 24 C -0.013 4.013 25 O -0.178 6.178 26 C -0.162 4.162 27 C -0.058 4.058 28 H 0.394 0.606 29 H 0.107 0.893 30 H -0.298 1.298 31 H -0.283 1.283 32 H 0.150 0.850 33 H 0.148 0.852 34 H 0.108 0.892 35 H 0.099 0.901 36 H 0.416 0.584 37 H 0.055 0.945 38 H 0.096 0.904 39 H 0.061 0.939 40 H 0.060 0.940 41 H 0.396 0.604 42 H 0.112 0.888 43 H 0.084 0.916 44 H 0.194 0.806 45 H 0.252 0.748 46 H 0.133 0.867 47 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.685 -2.548 -8.852 9.594 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.179 4.179 3 Si 0.678 3.322 4 C -0.161 4.161 5 C -0.094 4.094 6 C -0.224 4.224 7 C 0.079 3.921 8 O -0.237 6.237 9 C 0.061 3.939 10 C -0.014 4.014 11 C -0.228 4.228 12 C 0.371 3.629 13 O -0.453 6.453 14 N -0.346 5.346 15 C 0.012 3.988 16 H 0.113 0.887 17 C -0.180 4.180 18 C -0.130 4.130 19 H 0.106 0.894 20 C 0.008 3.992 21 O -0.408 6.408 22 C -0.159 4.159 23 C -0.214 4.214 24 C -0.078 4.078 25 O -0.074 6.074 26 C -0.181 4.181 27 C -0.076 4.076 28 H 0.244 0.756 29 H 0.125 0.875 30 H -0.226 1.226 31 H -0.210 1.210 32 H 0.167 0.833 33 H 0.165 0.835 34 H 0.126 0.874 35 H 0.117 0.883 36 H 0.254 0.746 37 H 0.074 0.926 38 H 0.114 0.886 39 H 0.079 0.921 40 H 0.078 0.922 41 H 0.246 0.754 42 H 0.130 0.870 43 H 0.102 0.898 44 H 0.211 0.789 45 H 0.268 0.732 46 H 0.151 0.849 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.992 -1.843 -6.573 7.453 hybrid contribution 0.298 -0.889 -0.735 1.191 sum 3.289 -2.732 -7.308 8.467 Atomic orbital electron populations 1.86450 1.17372 1.82186 1.50452 1.25113 0.85167 1.10703 0.96872 0.93707 0.77935 0.75658 0.84864 1.20361 1.01912 0.95465 0.98362 1.21022 0.95717 0.99902 0.92743 1.21418 1.06019 0.93791 1.01168 1.19182 0.94675 0.91918 0.86348 1.86044 1.65295 1.40665 1.31690 1.21142 0.95364 0.91316 0.86126 1.22049 0.87065 0.96114 0.96162 1.21400 0.98532 1.05760 0.97109 1.17501 0.83304 0.80216 0.81876 1.90774 1.64251 1.38501 1.51818 1.45639 1.24483 1.47838 1.16680 1.22519 0.84935 0.94669 0.96649 0.88699 1.23515 0.98405 0.98480 0.97573 1.22313 0.98385 0.97696 0.94583 0.89406 1.22233 0.99146 0.85045 0.92811 1.86454 1.90581 1.35528 1.28284 1.23306 1.00430 0.95979 0.96194 1.23260 0.95310 1.00078 1.02792 1.24924 1.02144 0.98434 0.82315 1.83793 1.38608 1.46952 1.38049 1.20628 1.01174 1.01426 0.94878 1.20937 0.97005 0.93893 0.95758 0.75572 0.87511 1.22600 1.21029 0.83307 0.83481 0.87387 0.88299 0.74616 0.92563 0.88573 0.92090 0.92201 0.75383 0.86974 0.89762 0.78921 0.73186 0.84895 0.84278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.41 12.77 -148.98 -1.90 -3.31 16 2 C -0.07 -0.12 2.82 71.24 0.20 0.08 16 3 Si 0.77 -0.28 29.78 68.60 2.04 1.76 16 4 C -0.16 -0.54 5.39 -19.85 -0.11 -0.65 16 5 C -0.08 -0.17 8.66 22.26 0.19 0.02 16 6 C -0.21 -0.89 9.04 22.37 0.20 -0.69 16 7 C 0.12 1.01 6.69 22.51 0.15 1.16 16 8 O -0.32 -3.20 10.12 -92.37 -0.93 -4.14 16 9 C 0.13 0.74 4.74 71.24 0.34 1.08 16 10 C 0.04 0.22 7.00 25.26 0.18 0.39 16 11 C -0.22 -0.85 6.31 -18.99 -0.12 -0.97 16 12 C 0.58 3.74 7.81 86.65 0.68 4.42 16 13 O -0.57 -7.86 14.44 -4.10 -0.06 -7.92 16 14 N -0.70 0.44 5.35 -443.36 -2.37 -1.93 16 15 C 0.12 0.00 4.24 45.52 0.19 0.20 16 16 H 0.09 0.50 7.46 -2.39 -0.02 0.48 16 17 C -0.14 0.04 7.43 31.12 0.23 0.27 16 18 C -0.11 0.22 4.01 -10.26 -0.04 0.17 16 19 H 0.09 0.10 8.14 -2.39 -0.02 0.08 16 20 C 0.09 -0.32 6.88 71.98 0.50 0.18 16 21 O -0.60 -0.29 13.66 -148.98 -2.04 -2.33 16 22 C -0.12 0.64 7.39 31.12 0.23 0.87 16 23 C -0.20 0.78 10.60 23.65 0.25 1.03 16 24 C -0.01 0.06 12.03 66.89 0.80 0.86 16 25 O -0.18 -0.51 10.52 4.45 0.05 -0.46 16 26 C -0.16 -1.18 9.99 22.37 0.22 -0.95 16 27 C -0.06 -0.29 9.60 22.25 0.21 -0.08 16 28 H 0.39 -1.98 8.70 -74.06 -0.64 -2.62 16 29 H 0.11 0.28 7.96 -2.39 -0.02 0.26 16 30 H -0.30 -2.04 7.11 99.48 0.71 -1.34 16 31 H -0.28 -1.09 7.11 99.48 0.71 -0.38 16 32 H 0.15 -0.39 4.87 -2.91 -0.01 -0.40 16 33 H 0.15 0.05 6.30 -2.91 -0.02 0.03 16 34 H 0.11 0.70 6.00 -2.39 -0.01 0.69 16 35 H 0.10 0.09 7.66 -2.39 -0.02 0.07 16 36 H 0.42 -3.02 7.90 -92.71 -0.73 -3.75 16 37 H 0.06 0.21 8.14 -2.38 -0.02 0.19 16 38 H 0.10 -0.25 7.90 -2.39 -0.02 -0.27 16 39 H 0.06 -0.41 7.84 -2.39 -0.02 -0.42 16 40 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 41 H 0.40 -3.21 9.12 -74.06 -0.68 -3.88 16 42 H 0.11 -1.10 8.08 -2.39 -0.02 -1.12 16 43 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 44 H 0.19 -2.23 7.74 -2.91 -0.02 -2.26 16 45 H 0.25 -3.42 8.06 -2.91 -0.02 -3.44 16 46 H 0.13 0.79 8.06 -2.91 -0.02 0.77 16 47 H 0.14 0.44 8.06 -2.91 -0.02 0.41 16 Total: 0.00 -26.80 395.78 -1.87 -28.67 By element: Atomic # 1 Polarization: -16.78 SS G_CDS: -0.97 Total: -17.74 kcal Atomic # 6 Polarization: 3.07 SS G_CDS: 4.31 Total: 7.39 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -2.37 Total: -1.93 kcal Atomic # 8 Polarization: -13.26 SS G_CDS: -4.88 Total: -18.15 kcal Atomic # 14 Polarization: -0.28 SS G_CDS: 2.04 Total: 1.76 kcal Total: -26.80 -1.87 -28.67 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.121 kcal (2) G-P(sol) polarization free energy of solvation -26.801 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.922 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.868 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.669 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds