Wall clock time and date at job start Sat Mar 6 2021 19:32:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35990 * 116.99990 * 2 1 4 4 C 1.38676 * 119.99807 * 180.02562 * 3 2 1 5 5 C 1.38161 * 119.99570 * 179.75021 * 4 3 2 6 6 C 1.50702 * 120.00045 * 180.25420 * 5 4 3 7 7 O 1.42893 * 109.47063 * 255.25593 * 6 5 4 8 8 Si 1.86303 * 109.46916 * 15.25228 * 6 5 4 9 9 C 1.38676 * 119.99688 * 0.50463 * 5 4 3 10 10 O 1.35986 * 119.99782 * 179.74390 * 9 5 4 11 11 C 1.42898 * 117.00270 * 179.72494 * 10 9 5 12 12 C 1.50697 * 109.47341 * 180.02562 * 11 10 9 13 13 O 1.21286 * 119.99998 * 0.02562 * 12 11 10 14 14 N 1.34775 * 120.00136 * 180.02562 * 12 11 10 15 15 C 1.46497 * 120.00126 * 180.02562 * 14 12 11 16 16 H 1.09002 * 112.84935 * 25.32833 * 15 14 12 17 17 C 1.53786 * 113.61643 * 156.52505 * 15 14 12 18 18 C 1.53783 * 87.08050 * 140.06125 * 17 15 14 19 19 H 1.08998 * 113.60991 * 89.11784 * 18 17 15 20 20 C 1.52991 * 113.61492 * 219.93527 * 18 17 15 21 21 O 1.42902 * 109.47291 * 185.00581 * 20 18 17 22 22 C 1.53781 * 113.61305 * 254.13352 * 15 14 12 23 23 C 1.38716 * 120.00474 * 359.47592 * 9 5 4 24 24 C 1.38114 * 119.99802 * 0.27109 * 23 9 5 25 25 H 1.09000 * 109.47030 * 179.97438 * 1 2 3 26 26 H 1.09006 * 109.47203 * 299.99749 * 1 2 3 27 27 H 1.08999 * 109.47728 * 59.99673 * 1 2 3 28 28 H 1.07999 * 120.00361 * 0.02562 * 4 3 2 29 29 H 1.08995 * 109.46925 * 135.25347 * 6 5 4 30 30 H 0.96696 * 114.00372 * 180.02562 * 7 6 5 31 31 H 1.48498 * 110.00015 * 300.00019 * 8 6 5 32 32 H 1.48502 * 109.99858 * 61.32449 * 8 6 5 33 33 H 1.09012 * 109.46386 * 60.00323 * 11 10 9 34 34 H 1.09001 * 109.47274 * 300.01078 * 11 10 9 35 35 H 0.97006 * 119.99816 * 359.97438 * 14 12 11 36 36 H 1.08992 * 113.61675 * 254.61383 * 17 15 14 37 37 H 1.09005 * 113.61030 * 25.43033 * 17 15 14 38 38 H 1.08997 * 109.47353 * 305.00430 * 20 18 17 39 39 H 1.09002 * 109.47266 * 65.00348 * 20 18 17 40 40 H 0.96702 * 114.00215 * 180.02562 * 21 20 18 41 41 H 1.08999 * 113.61567 * 334.48111 * 22 15 14 42 42 H 1.08998 * 113.61196 * 105.38466 * 22 15 14 43 43 H 1.08001 * 120.00440 * 180.29680 * 23 9 5 44 44 H 1.07999 * 120.00041 * 179.97438 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0584 2.5153 -0.0058 6 6 5.5633 2.5942 -0.0121 7 8 6.0263 2.9643 1.2880 8 14 6.2702 0.9334 -0.4736 9 6 3.3030 3.6782 0.0001 10 8 3.9203 4.8899 0.0003 11 6 3.0804 6.0460 0.0004 12 6 3.9346 7.2875 -0.0001 13 8 5.1436 7.1918 -0.0010 14 7 3.3549 8.5043 0.0004 15 6 4.1853 9.7112 -0.0007 16 1 5.1727 9.5452 -0.4315 17 6 3.4691 10.9512 -0.5613 18 6 4.1512 11.7544 0.5587 19 1 5.1293 12.1471 0.2808 20 6 3.2455 12.8111 1.1941 21 8 3.9973 13.5789 2.1361 22 6 4.2186 10.4371 1.3546 23 6 1.9177 3.6057 0.0003 24 6 1.2907 2.3750 0.0002 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 4.0194 0.3785 -0.0014 29 1 5.8849 3.3405 -0.7385 30 1 6.9882 3.0348 1.3577 31 1 5.8390 -0.0930 0.5092 32 1 5.8218 0.5516 -1.8368 33 1 2.4512 6.0377 0.8905 34 1 2.4510 6.0379 -0.8895 35 1 2.3879 8.5808 0.0007 36 1 3.7986 11.2307 -1.5619 37 1 2.3837 10.9071 -0.4699 38 1 2.8552 13.4694 0.4180 39 1 2.4169 12.3201 1.7045 40 1 3.4851 14.2693 2.5790 41 1 3.3379 10.2535 1.9701 42 1 5.1528 10.3018 1.8995 43 1 1.3295 4.5114 0.0000 44 1 0.2122 2.3185 0.0007 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_4974302.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:32:03 Heat of formation + Delta-G solvation = -124.901490 kcal Electronic energy + Delta-G solvation = -27133.383970 eV Core-core repulsion = 23019.728828 eV Total energy + Delta-G solvation = -4113.655142 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.77484 -41.19999 -40.17424 -39.34748 -37.94643 -37.28364 -36.86422 -34.61356 -32.89600 -31.14957 -29.86553 -28.47257 -27.99442 -26.83568 -26.49228 -24.18787 -23.04865 -22.26523 -21.64430 -20.72780 -19.39870 -18.66212 -18.49853 -18.24643 -18.22734 -17.54716 -17.35655 -17.29791 -16.69378 -16.44062 -16.00256 -15.72212 -15.64769 -15.46039 -15.22565 -15.04124 -14.73371 -14.35522 -14.04420 -13.84209 -13.74801 -13.62444 -13.53125 -13.33944 -13.05914 -12.78277 -12.62186 -12.54081 -12.35778 -11.83390 -11.79393 -11.69446 -11.56632 -11.47032 -10.94755 -10.81522 -10.14393 -10.12584 -10.06169 -8.77519 -4.86852 0.06354 0.39404 1.40229 1.47221 1.49682 1.75197 2.07159 2.24798 2.54946 2.58249 3.06529 3.31707 3.44808 3.51271 3.56063 3.65337 3.70386 3.77633 3.88076 3.90325 3.92835 4.01918 4.08418 4.16437 4.22788 4.27567 4.33227 4.33744 4.46836 4.47020 4.52952 4.53807 4.63578 4.64537 4.71773 4.91488 5.00143 5.04555 5.13565 5.18390 5.19782 5.41372 5.45714 6.15019 6.33148 6.42477 6.61553 6.84383 7.10887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.317 6.317 3 C 0.099 3.901 4 C -0.116 4.116 5 C -0.062 4.062 6 C -0.062 4.062 7 O -0.540 6.540 8 Si 0.682 3.318 9 C 0.119 3.881 10 O -0.276 6.276 11 C 0.038 3.962 12 C 0.517 3.483 13 O -0.508 6.508 14 N -0.719 5.719 15 C 0.125 3.875 16 H 0.119 0.881 17 C -0.138 4.138 18 C -0.109 4.109 19 H 0.103 0.897 20 C 0.087 3.913 21 O -0.573 6.573 22 C -0.144 4.144 23 C -0.170 4.170 24 C -0.161 4.161 25 H 0.103 0.897 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.138 0.862 29 H 0.078 0.922 30 H 0.381 0.619 31 H -0.248 1.248 32 H -0.254 1.254 33 H 0.093 0.907 34 H 0.092 0.908 35 H 0.402 0.598 36 H 0.081 0.919 37 H 0.089 0.911 38 H 0.048 0.952 39 H 0.046 0.954 40 H 0.381 0.619 41 H 0.085 0.915 42 H 0.077 0.923 43 H 0.135 0.865 44 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.358 3.188 -1.491 6.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.231 6.231 3 C 0.054 3.946 4 C -0.134 4.134 5 C -0.063 4.063 6 C -0.172 4.172 7 O -0.346 6.346 8 Si 0.584 3.416 9 C 0.074 3.926 10 O -0.188 6.188 11 C -0.041 4.041 12 C 0.302 3.698 13 O -0.381 6.381 14 N -0.372 5.372 15 C 0.020 3.980 16 H 0.137 0.863 17 C -0.176 4.176 18 C -0.128 4.128 19 H 0.122 0.878 20 C 0.009 3.991 21 O -0.379 6.379 22 C -0.183 4.183 23 C -0.188 4.188 24 C -0.179 4.179 25 H 0.121 0.879 26 H 0.075 0.925 27 H 0.075 0.925 28 H 0.155 0.845 29 H 0.096 0.904 30 H 0.229 0.771 31 H -0.173 1.173 32 H -0.178 1.178 33 H 0.111 0.889 34 H 0.110 0.890 35 H 0.236 0.764 36 H 0.100 0.900 37 H 0.107 0.893 38 H 0.066 0.934 39 H 0.065 0.935 40 H 0.228 0.772 41 H 0.104 0.896 42 H 0.095 0.905 43 H 0.153 0.847 44 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -4.507 1.702 -1.808 5.145 hybrid contribution -2.151 1.053 0.181 2.402 sum -6.658 2.755 -1.626 7.386 Atomic orbital electron populations 1.23100 0.78002 1.04366 1.01380 1.86104 1.21631 1.26284 1.89039 1.18717 0.91706 0.84639 0.99499 1.20090 0.92020 0.96952 1.04336 1.18413 0.94077 0.89806 1.03978 1.24499 0.92367 1.10898 0.89452 1.86492 1.27098 1.92661 1.28331 0.95324 0.90631 0.75710 0.79977 1.18583 0.90468 0.84883 0.98713 1.86228 1.33224 1.10702 1.88691 1.22475 0.93301 0.84517 1.03789 1.20041 0.88882 0.84197 0.76686 1.90783 1.14123 1.86475 1.46751 1.45815 1.10242 1.04984 1.76182 1.22549 0.96259 0.81728 0.97430 0.86344 1.23358 1.00566 0.94515 0.99142 1.22385 1.00519 0.93553 0.96323 0.87842 1.22135 0.93080 0.92722 0.91139 1.86501 1.41313 1.51330 1.58709 1.23580 1.03447 0.94459 0.96790 1.21052 0.92863 0.98701 1.06223 1.21078 1.00304 0.91429 1.05134 0.87906 0.92500 0.92538 0.84504 0.90399 0.77123 1.17346 1.17823 0.88933 0.89001 0.76381 0.90009 0.89271 0.93383 0.93530 0.77187 0.89620 0.90450 0.84694 0.84585 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.32 -1.04 10.50 -19.71 -0.21 -1.24 16 3 C 0.10 0.36 6.69 -39.24 -0.26 0.10 16 4 C -0.12 -0.53 8.59 -39.45 -0.34 -0.87 16 5 C -0.06 -0.28 5.30 -104.49 -0.55 -0.84 16 6 C -0.06 -0.18 2.36 36.01 0.09 -0.10 16 7 O -0.54 -1.86 12.85 -35.23 -0.45 -2.31 16 8 Si 0.68 0.68 30.21 -169.99 -5.13 -4.46 16 9 C 0.12 0.45 6.66 -39.24 -0.26 0.19 16 10 O -0.28 -1.12 9.00 -39.61 -0.36 -1.48 16 11 C 0.04 -0.01 5.22 36.00 0.19 0.18 16 12 C 0.52 0.94 7.91 -10.99 -0.09 0.85 16 13 O -0.51 -3.40 16.12 -14.36 -0.23 -3.63 16 14 N -0.72 1.07 5.36 -53.02 -0.28 0.78 16 15 C 0.12 -0.09 4.21 -67.12 -0.28 -0.38 16 16 H 0.12 0.14 7.50 -51.93 -0.39 -0.25 16 17 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 18 C -0.11 0.13 4.01 -89.67 -0.36 -0.23 16 19 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 20 C 0.09 -0.13 6.89 37.15 0.26 0.13 16 21 O -0.57 -0.22 13.66 -35.23 -0.48 -0.70 16 22 C -0.14 0.07 7.45 -25.78 -0.19 -0.13 16 23 C -0.17 -0.22 9.03 -39.45 -0.36 -0.58 16 24 C -0.16 -0.24 9.03 -39.45 -0.36 -0.60 16 25 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 26 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 27 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 28 H 0.14 0.61 4.90 -52.49 -0.26 0.35 16 29 H 0.08 0.21 7.82 -51.93 -0.41 -0.20 16 30 H 0.38 -0.56 8.74 45.56 0.40 -0.16 16 31 H -0.25 -0.89 6.74 56.52 0.38 -0.51 16 32 H -0.25 -0.84 7.11 56.52 0.40 -0.44 16 33 H 0.09 -0.22 7.66 -51.92 -0.40 -0.62 16 34 H 0.09 -0.27 7.66 -51.93 -0.40 -0.67 16 35 H 0.40 -1.93 8.71 -40.82 -0.36 -2.29 16 36 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 37 H 0.09 -0.38 8.07 -51.93 -0.42 -0.80 16 38 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.05 -0.12 7.85 -51.93 -0.41 -0.52 16 40 H 0.38 -1.45 9.12 45.56 0.42 -1.04 16 41 H 0.09 -0.09 7.91 -51.93 -0.41 -0.50 16 42 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 43 H 0.14 -0.27 6.29 -52.49 -0.33 -0.60 16 44 H 0.14 -0.16 6.29 -52.49 -0.33 -0.49 16 LS Contribution 366.66 15.07 5.53 5.53 Total: 0.00 -12.28 366.66 -8.76 -21.04 By element: Atomic # 1 Polarization: -7.00 SS G_CDS: -5.42 Total: -12.41 kcal Atomic # 6 Polarization: 0.62 SS G_CDS: -1.72 Total: -1.11 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -0.28 Total: 0.78 kcal Atomic # 8 Polarization: -7.64 SS G_CDS: -1.73 Total: -9.37 kcal Atomic # 14 Polarization: 0.68 SS G_CDS: -5.13 Total: -4.46 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -12.28 -8.76 -21.04 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4974302.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.864 kcal (2) G-P(sol) polarization free energy of solvation -12.278 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.142 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.037 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.901 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds