Wall clock time and date at job start Sat Mar 6 2021 19:32:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35990 * 116.99990 * 2 1 4 4 C 1.38676 * 119.99807 * 180.02562 * 3 2 1 5 5 C 1.38161 * 119.99570 * 179.75021 * 4 3 2 6 6 C 1.50702 * 120.00045 * 180.25420 * 5 4 3 7 7 O 1.42893 * 109.47063 * 255.25593 * 6 5 4 8 8 Si 1.86303 * 109.46916 * 15.25228 * 6 5 4 9 9 C 1.38676 * 119.99688 * 0.50463 * 5 4 3 10 10 O 1.35986 * 119.99782 * 179.74390 * 9 5 4 11 11 C 1.42898 * 117.00270 * 179.72494 * 10 9 5 12 12 C 1.50697 * 109.47341 * 180.02562 * 11 10 9 13 13 O 1.21286 * 119.99998 * 0.02562 * 12 11 10 14 14 N 1.34775 * 120.00136 * 180.02562 * 12 11 10 15 15 C 1.46497 * 120.00126 * 180.02562 * 14 12 11 16 16 H 1.09002 * 112.84935 * 25.32833 * 15 14 12 17 17 C 1.53786 * 113.61643 * 156.52505 * 15 14 12 18 18 C 1.53783 * 87.08050 * 140.06125 * 17 15 14 19 19 H 1.08998 * 113.60991 * 89.11784 * 18 17 15 20 20 C 1.52991 * 113.61492 * 219.93527 * 18 17 15 21 21 O 1.42902 * 109.47291 * 185.00581 * 20 18 17 22 22 C 1.53781 * 113.61305 * 254.13352 * 15 14 12 23 23 C 1.38716 * 120.00474 * 359.47592 * 9 5 4 24 24 C 1.38114 * 119.99802 * 0.27109 * 23 9 5 25 25 H 1.09000 * 109.47030 * 179.97438 * 1 2 3 26 26 H 1.09006 * 109.47203 * 299.99749 * 1 2 3 27 27 H 1.08999 * 109.47728 * 59.99673 * 1 2 3 28 28 H 1.07999 * 120.00361 * 0.02562 * 4 3 2 29 29 H 1.08995 * 109.46925 * 135.25347 * 6 5 4 30 30 H 0.96696 * 114.00372 * 180.02562 * 7 6 5 31 31 H 1.48498 * 110.00015 * 300.00019 * 8 6 5 32 32 H 1.48502 * 109.99858 * 61.32449 * 8 6 5 33 33 H 1.09012 * 109.46386 * 60.00323 * 11 10 9 34 34 H 1.09001 * 109.47274 * 300.01078 * 11 10 9 35 35 H 0.97006 * 119.99816 * 359.97438 * 14 12 11 36 36 H 1.08992 * 113.61675 * 254.61383 * 17 15 14 37 37 H 1.09005 * 113.61030 * 25.43033 * 17 15 14 38 38 H 1.08997 * 109.47353 * 305.00430 * 20 18 17 39 39 H 1.09002 * 109.47266 * 65.00348 * 20 18 17 40 40 H 0.96702 * 114.00215 * 180.02562 * 21 20 18 41 41 H 1.08999 * 113.61567 * 334.48111 * 22 15 14 42 42 H 1.08998 * 113.61196 * 105.38466 * 22 15 14 43 43 H 1.08001 * 120.00440 * 180.29680 * 23 9 5 44 44 H 1.07999 * 120.00041 * 179.97438 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0584 2.5153 -0.0058 6 6 5.5633 2.5942 -0.0121 7 8 6.0263 2.9643 1.2880 8 14 6.2702 0.9334 -0.4736 9 6 3.3030 3.6782 0.0001 10 8 3.9203 4.8899 0.0003 11 6 3.0804 6.0460 0.0004 12 6 3.9346 7.2875 -0.0001 13 8 5.1436 7.1918 -0.0010 14 7 3.3549 8.5043 0.0004 15 6 4.1853 9.7112 -0.0007 16 1 5.1727 9.5452 -0.4315 17 6 3.4691 10.9512 -0.5613 18 6 4.1512 11.7544 0.5587 19 1 5.1293 12.1471 0.2808 20 6 3.2455 12.8111 1.1941 21 8 3.9973 13.5789 2.1361 22 6 4.2186 10.4371 1.3546 23 6 1.9177 3.6057 0.0003 24 6 1.2907 2.3750 0.0002 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 4.0194 0.3785 -0.0014 29 1 5.8849 3.3405 -0.7385 30 1 6.9882 3.0348 1.3577 31 1 5.8390 -0.0930 0.5092 32 1 5.8218 0.5516 -1.8368 33 1 2.4512 6.0377 0.8905 34 1 2.4510 6.0379 -0.8895 35 1 2.3879 8.5808 0.0007 36 1 3.7986 11.2307 -1.5619 37 1 2.3837 10.9071 -0.4699 38 1 2.8552 13.4694 0.4180 39 1 2.4169 12.3201 1.7045 40 1 3.4851 14.2693 2.5790 41 1 3.3379 10.2535 1.9701 42 1 5.1528 10.3018 1.8995 43 1 1.3295 4.5114 0.0000 44 1 0.2122 2.3185 0.0007 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12366696_4974302.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:32:02 Heat of formation + Delta-G solvation = -132.142453 kcal Electronic energy + Delta-G solvation = -27133.697962 eV Core-core repulsion = 23019.728828 eV Total energy + Delta-G solvation = -4113.969134 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.88719 -41.24051 -40.23244 -39.43357 -38.10973 -37.24763 -37.02174 -34.67526 -33.03282 -31.22590 -29.88126 -28.40650 -27.97626 -26.72447 -26.64432 -24.24599 -23.06444 -22.39420 -21.70178 -20.65014 -19.49896 -18.75831 -18.53349 -18.45501 -18.17742 -17.64959 -17.40504 -17.29240 -16.73881 -16.38191 -16.10307 -15.73741 -15.71599 -15.57118 -15.36176 -15.12617 -14.80570 -14.40184 -14.10709 -13.99422 -13.79592 -13.59746 -13.46776 -13.34668 -13.18822 -12.70497 -12.62632 -12.57176 -12.32436 -12.05941 -11.80643 -11.73964 -11.52460 -11.48002 -10.99382 -10.79214 -10.31761 -10.24397 -10.13771 -8.92590 -5.00121 -0.09071 0.22328 1.24974 1.41434 1.45634 1.59085 1.90216 2.20340 2.40722 2.56323 3.23314 3.38200 3.42701 3.49960 3.59690 3.67700 3.77513 3.78667 3.92508 3.96881 4.02586 4.03842 4.06487 4.14413 4.29599 4.32699 4.33269 4.42952 4.44908 4.55925 4.63803 4.67214 4.69853 4.76609 4.80921 4.88073 5.00093 5.01124 5.05418 5.06971 5.23537 5.29734 5.52300 6.09483 6.30534 6.45582 6.85861 6.90246 7.11852 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.086 3.914 4 C -0.143 4.143 5 C -0.091 4.091 6 C -0.075 4.075 7 O -0.561 6.561 8 Si 0.780 3.220 9 C 0.105 3.895 10 O -0.305 6.305 11 C 0.033 3.967 12 C 0.513 3.487 13 O -0.569 6.569 14 N -0.698 5.698 15 C 0.118 3.882 16 H 0.091 0.909 17 C -0.117 4.117 18 C -0.113 4.113 19 H 0.085 0.915 20 C 0.085 3.915 21 O -0.601 6.601 22 C -0.145 4.145 23 C -0.160 4.160 24 C -0.156 4.156 25 H 0.115 0.885 26 H 0.069 0.931 27 H 0.071 0.929 28 H 0.125 0.875 29 H 0.074 0.926 30 H 0.399 0.601 31 H -0.287 1.287 32 H -0.287 1.287 33 H 0.122 0.878 34 H 0.127 0.873 35 H 0.422 0.578 36 H 0.085 0.915 37 H 0.116 0.884 38 H 0.061 0.939 39 H 0.062 0.938 40 H 0.396 0.604 41 H 0.098 0.902 42 H 0.050 0.950 43 H 0.175 0.825 44 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.272 4.292 -1.767 9.485 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.256 6.256 3 C 0.041 3.959 4 C -0.161 4.161 5 C -0.092 4.092 6 C -0.184 4.184 7 O -0.370 6.370 8 Si 0.685 3.315 9 C 0.059 3.941 10 O -0.218 6.218 11 C -0.044 4.044 12 C 0.299 3.701 13 O -0.447 6.447 14 N -0.352 5.352 15 C 0.013 3.987 16 H 0.109 0.891 17 C -0.155 4.155 18 C -0.132 4.132 19 H 0.104 0.896 20 C 0.007 3.993 21 O -0.410 6.410 22 C -0.183 4.183 23 C -0.178 4.178 24 C -0.174 4.174 25 H 0.133 0.867 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.142 0.858 29 H 0.092 0.908 30 H 0.249 0.751 31 H -0.215 1.215 32 H -0.214 1.214 33 H 0.139 0.861 34 H 0.145 0.855 35 H 0.260 0.740 36 H 0.104 0.896 37 H 0.134 0.866 38 H 0.079 0.921 39 H 0.080 0.920 40 H 0.246 0.754 41 H 0.116 0.884 42 H 0.069 0.931 43 H 0.192 0.808 44 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -7.464 2.866 -2.074 8.260 hybrid contribution -1.329 0.754 0.304 1.558 sum -8.794 3.621 -1.770 9.673 Atomic orbital electron populations 1.23392 0.75954 1.05731 1.02660 1.86072 1.23884 1.26544 1.89094 1.18926 0.91614 0.85660 0.99731 1.20136 0.93005 0.96668 1.06277 1.18705 0.94993 0.90477 1.05010 1.24753 0.92332 1.12112 0.89159 1.86435 1.28989 1.92804 1.28744 0.94359 0.88799 0.72335 0.76000 1.18764 0.91540 0.84568 0.99231 1.86186 1.35110 1.11630 1.88912 1.22774 0.92804 0.82149 1.06710 1.20539 0.88364 0.85561 0.75625 1.90761 1.16754 1.87352 1.49871 1.45662 1.11239 1.03829 1.74482 1.22480 0.95883 0.82731 0.97605 0.89068 1.23282 1.01705 0.91894 0.98578 1.22374 1.00308 0.93530 0.96986 0.89626 1.22243 0.92965 0.92704 0.91347 1.86459 1.42893 1.52260 1.59382 1.23588 1.02663 0.95288 0.96809 1.21481 0.92024 1.00170 1.04112 1.21438 1.01719 0.90582 1.03676 0.86706 0.91231 0.91085 0.85774 0.90752 0.75087 1.21487 1.21364 0.86077 0.85528 0.73963 0.89587 0.86569 0.92086 0.92011 0.75378 0.88377 0.93063 0.80780 0.81474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.42 10.50 -93.44 -0.98 -3.40 16 3 C 0.09 0.67 6.69 22.49 0.15 0.82 16 4 C -0.14 -1.60 8.59 22.36 0.19 -1.40 16 5 C -0.09 -0.99 5.30 -19.78 -0.10 -1.10 16 6 C -0.07 -0.61 2.36 71.24 0.17 -0.44 16 7 O -0.56 -4.98 12.85 -148.98 -1.92 -6.90 16 8 Si 0.78 3.16 30.21 68.60 2.07 5.23 16 9 C 0.10 0.80 6.66 22.49 0.15 0.95 16 10 O -0.31 -2.60 9.00 -74.36 -0.67 -3.27 16 11 C 0.03 -0.06 5.22 71.24 0.37 0.31 16 12 C 0.51 1.92 7.91 87.66 0.69 2.61 16 13 O -0.57 -8.86 16.12 15.99 0.26 -8.61 16 14 N -0.70 2.73 5.36 -440.03 -2.36 0.38 16 15 C 0.12 -0.14 4.21 45.52 0.19 0.06 16 16 H 0.09 0.43 7.50 -2.39 -0.02 0.41 16 17 C -0.12 0.80 7.39 31.12 0.23 1.03 16 18 C -0.11 0.26 4.01 -10.18 -0.04 0.22 16 19 H 0.09 0.10 8.14 -2.39 -0.02 0.08 16 20 C 0.08 -0.34 6.89 71.98 0.50 0.15 16 21 O -0.60 -0.39 13.66 -148.98 -2.04 -2.43 16 22 C -0.14 0.05 7.45 31.21 0.23 0.28 16 23 C -0.16 -0.12 9.03 22.35 0.20 0.08 16 24 C -0.16 -0.23 9.03 22.36 0.20 -0.02 16 25 H 0.11 -0.66 8.14 -2.39 -0.02 -0.68 16 26 H 0.07 -0.38 7.66 -2.38 -0.02 -0.40 16 27 H 0.07 -0.42 7.66 -2.39 -0.02 -0.44 16 28 H 0.12 1.51 4.90 -2.91 -0.01 1.50 16 29 H 0.07 0.58 7.82 -2.39 -0.02 0.57 16 30 H 0.40 -0.48 8.74 -74.06 -0.65 -1.13 16 31 H -0.29 -2.89 6.74 99.48 0.67 -2.22 16 32 H -0.29 -2.59 7.11 99.48 0.71 -1.88 16 33 H 0.12 -0.93 7.66 -2.38 -0.02 -0.95 16 34 H 0.13 -1.14 7.66 -2.39 -0.02 -1.16 16 35 H 0.42 -5.19 8.71 -92.70 -0.81 -6.00 16 36 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 37 H 0.12 -1.38 8.07 -2.38 -0.02 -1.40 16 38 H 0.06 -0.40 8.14 -2.39 -0.02 -0.42 16 39 H 0.06 -0.44 7.85 -2.39 -0.02 -0.46 16 40 H 0.40 -3.16 9.12 -74.06 -0.68 -3.83 16 41 H 0.10 -0.30 7.91 -2.39 -0.02 -0.32 16 42 H 0.05 0.24 8.14 -2.39 -0.02 0.23 16 43 H 0.17 -1.42 6.29 -2.91 -0.02 -1.44 16 44 H 0.17 -0.92 6.29 -2.91 -0.02 -0.94 16 Total: 0.00 -33.43 366.66 -2.45 -35.88 By element: Atomic # 1 Polarization: -20.44 SS G_CDS: -1.07 Total: -21.51 kcal Atomic # 6 Polarization: 0.38 SS G_CDS: 4.25 Total: 4.62 kcal Atomic # 7 Polarization: 2.73 SS G_CDS: -2.36 Total: 0.38 kcal Atomic # 8 Polarization: -19.26 SS G_CDS: -5.34 Total: -24.60 kcal Atomic # 14 Polarization: 3.16 SS G_CDS: 2.07 Total: 5.23 kcal Total: -33.43 -2.45 -35.88 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_4974302.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.263 kcal (2) G-P(sol) polarization free energy of solvation -33.428 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.879 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.142 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds