Wall clock time and date at job start Sat Mar 6 2021 19:32:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35968 * 116.99874 * 2 1 4 4 C 1.39447 * 120.11853 * 180.02562 * 3 2 1 5 5 O 1.34774 * 133.24583 * 359.93323 * 4 3 2 6 6 C 1.34925 * 110.84452 * 180.02562 * 5 4 3 7 7 C 1.46991 * 125.14081 * 180.02562 * 6 5 4 8 8 O 1.21656 * 120.00114 * 179.97438 * 7 6 5 9 9 N 1.34771 * 119.99991 * 359.97438 * 7 6 5 10 10 C 1.46499 * 120.00076 * 179.97438 * 9 7 6 11 11 H 1.09002 * 112.85208 * 25.33529 * 10 9 7 12 12 C 1.53781 * 113.61405 * 156.52821 * 10 9 7 13 13 C 1.53784 * 87.08149 * 139.98603 * 12 10 9 14 14 H 1.08997 * 113.61816 * 89.11400 * 13 12 10 15 15 C 1.53001 * 113.61346 * 219.94070 * 13 12 10 16 16 O 1.42906 * 109.47138 * 184.99688 * 15 13 12 17 17 C 1.53780 * 113.61809 * 254.14064 * 10 9 7 18 18 C 1.35814 * 109.72007 * 0.02562 * 6 5 4 19 19 C 1.40615 * 119.13477 * 179.97438 * 4 3 2 20 20 C 1.39779 * 120.11784 * 359.96496 * 19 4 3 21 21 C 1.50696 * 120.09054 * 180.02562 * 20 19 4 22 22 O 1.42903 * 109.47131 * 284.99605 * 21 20 19 23 23 Si 1.86305 * 109.47185 * 165.00145 * 21 20 19 24 24 C 1.36631 * 119.81262 * 0.27748 * 20 19 4 25 25 C 1.38257 * 120.12150 * 359.97438 * 3 2 1 26 26 H 1.09001 * 109.47321 * 59.99880 * 1 2 3 27 27 H 1.09002 * 109.46970 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.47033 * 299.99860 * 1 2 3 29 29 H 0.97002 * 119.99905 * 0.02562 * 9 7 6 30 30 H 1.09000 * 113.61477 * 254.53191 * 12 10 9 31 31 H 1.08993 * 113.61741 * 25.43498 * 12 10 9 32 32 H 1.09005 * 109.46892 * 304.98837 * 15 13 12 33 33 H 1.08992 * 109.47761 * 64.99423 * 15 13 12 34 34 H 0.96699 * 113.99850 * 179.97438 * 16 15 13 35 35 H 1.08999 * 113.61031 * 334.56016 * 17 10 9 36 36 H 1.08996 * 113.61640 * 105.46811 * 17 10 9 37 37 H 1.07997 * 126.95528 * 180.02562 * 18 6 5 38 38 H 1.08999 * 109.47358 * 44.99965 * 21 20 19 39 39 H 0.96700 * 114.00311 * 300.00591 * 22 21 20 40 40 H 1.48499 * 109.99670 * 58.67633 * 23 21 20 41 41 H 1.48497 * 110.00233 * 179.97438 * 23 21 20 42 42 H 1.08000 * 119.75142 * 179.72109 * 24 20 19 43 43 H 1.08001 * 119.66248 * 0.04103 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4141 0.3574 0.0000 6 6 5.6317 0.9387 -0.0004 7 6 6.9131 0.2185 -0.0005 8 8 7.9596 0.8389 -0.0013 9 7 6.9286 -1.1291 0.0003 10 6 8.2057 -1.8469 -0.0003 11 1 9.0200 -1.2627 0.4284 12 6 8.1100 -3.2751 0.5619 13 6 9.0725 -3.6973 -0.5608 14 1 10.1244 -3.6192 -0.2864 15 6 8.7219 -5.0453 -1.1939 16 8 9.7319 -5.4047 -2.1389 17 6 8.5529 -2.4853 -1.3556 18 6 5.4944 2.2899 -0.0007 19 6 4.0554 2.5511 -0.0011 20 6 3.2765 3.7117 -0.0018 21 6 3.9381 5.0656 -0.0030 22 8 4.4607 5.3416 1.2981 23 14 2.6862 6.3682 -0.4583 24 6 1.9136 3.6151 0.0037 25 6 1.2957 2.3726 -0.0005 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 6.0942 -1.6238 0.0006 30 1 8.5321 -3.3801 1.5613 31 1 7.1161 -3.7137 0.4728 32 1 8.6637 -5.8075 -0.4169 33 1 7.7602 -4.9694 -1.7012 34 1 9.5746 -6.2508 -2.5799 35 1 7.6804 -2.7076 -1.9698 36 1 9.3321 -1.9537 -1.9018 37 1 6.2874 3.0230 -0.0014 38 1 4.7503 5.0726 -0.7298 39 1 3.7921 5.3512 1.9967 40 1 1.5579 6.3475 0.5069 41 1 3.3261 7.7082 -0.4624 42 1 1.3127 4.5125 0.0077 43 1 0.2174 2.3120 -0.0003 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12366696_6672420.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:32:21 Heat of formation + Delta-G solvation = -90.353843 kcal Electronic energy + Delta-G solvation = -28341.530732 eV Core-core repulsion = 24128.459027 eV Total energy + Delta-G solvation = -4213.071705 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.134 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.79185 -41.37496 -40.62972 -39.65747 -39.14136 -37.28733 -37.12919 -34.79737 -33.68905 -31.96219 -31.08914 -29.06080 -28.38523 -26.77944 -26.36006 -25.45562 -24.03391 -23.06704 -21.96695 -21.80867 -20.86002 -19.73007 -19.05885 -18.58069 -18.21756 -17.92783 -17.82180 -17.52849 -17.02426 -16.62116 -16.43368 -16.22829 -15.95833 -15.93953 -15.85530 -15.26398 -14.84977 -14.60024 -14.58276 -14.46200 -14.22823 -13.54644 -13.51813 -13.47656 -13.42522 -13.26944 -12.76801 -12.49043 -12.42016 -12.28080 -12.13385 -11.80108 -11.66905 -11.59026 -11.49881 -11.05277 -10.82250 -10.61830 -10.32435 -9.85683 -9.03419 -4.89265 -0.70940 0.07316 0.57642 1.13619 1.29724 1.59012 1.82885 1.87180 1.97802 2.12009 2.36911 3.12070 3.21669 3.36285 3.40640 3.53015 3.62361 3.63854 3.72493 3.78938 3.84763 3.94650 3.99818 4.14936 4.31852 4.39942 4.41681 4.41956 4.42315 4.48388 4.60715 4.65591 4.71071 4.76245 4.76733 4.80882 4.84542 4.91890 5.00489 5.02466 5.13227 5.19476 5.30370 5.44005 5.56501 6.16137 6.26732 6.49348 6.77348 6.88882 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.333 6.333 3 C 0.138 3.862 4 C 0.022 3.978 5 O -0.180 6.180 6 C -0.033 4.033 7 C 0.602 3.398 8 O -0.547 6.547 9 N -0.692 5.692 10 C 0.113 3.887 11 H 0.105 0.895 12 C -0.121 4.121 13 C -0.108 4.108 14 H 0.093 0.907 15 C 0.085 3.915 16 O -0.599 6.599 17 C -0.144 4.144 18 C -0.113 4.113 19 C -0.096 4.096 20 C -0.100 4.100 21 C -0.091 4.091 22 O -0.548 6.548 23 Si 0.783 3.217 24 C -0.088 4.088 25 C -0.165 4.165 26 H 0.077 0.923 27 H 0.116 0.884 28 H 0.073 0.927 29 H 0.418 0.582 30 H 0.090 0.910 31 H 0.109 0.891 32 H 0.062 0.938 33 H 0.058 0.942 34 H 0.397 0.603 35 H 0.093 0.907 36 H 0.060 0.940 37 H 0.171 0.829 38 H 0.114 0.886 39 H 0.386 0.614 40 H -0.261 1.261 41 H -0.306 1.306 42 H 0.166 0.834 43 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.639 -3.618 -1.166 10.362 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.247 6.247 3 C 0.092 3.908 4 C -0.027 4.027 5 O -0.082 6.082 6 C -0.084 4.084 7 C 0.387 3.613 8 O -0.427 6.427 9 N -0.342 5.342 10 C 0.009 3.991 11 H 0.123 0.877 12 C -0.159 4.159 13 C -0.127 4.127 14 H 0.111 0.889 15 C 0.007 3.993 16 O -0.408 6.408 17 C -0.182 4.182 18 C -0.134 4.134 19 C -0.097 4.097 20 C -0.101 4.101 21 C -0.198 4.198 22 O -0.356 6.356 23 Si 0.687 3.313 24 C -0.106 4.106 25 C -0.183 4.183 26 H 0.095 0.905 27 H 0.134 0.866 28 H 0.092 0.908 29 H 0.256 0.744 30 H 0.109 0.891 31 H 0.127 0.873 32 H 0.080 0.920 33 H 0.076 0.924 34 H 0.246 0.754 35 H 0.111 0.889 36 H 0.079 0.921 37 H 0.188 0.812 38 H 0.132 0.868 39 H 0.236 0.764 40 H -0.187 1.187 41 H -0.234 1.234 42 H 0.183 0.817 43 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -8.473 -2.424 -1.041 8.874 hybrid contribution -0.109 -0.771 1.001 1.268 sum -8.582 -3.195 -0.041 9.158 Atomic orbital electron populations 1.23492 0.75284 1.06044 1.03177 1.86144 1.24335 1.25783 1.88429 1.17972 0.86039 0.86877 0.99913 1.19216 0.88256 0.87080 1.08107 1.84004 1.12645 1.35029 1.76513 1.21916 0.84006 0.92719 1.09714 1.16747 0.85016 0.82968 0.76526 1.90891 1.31511 1.68325 1.51944 1.45863 1.10989 1.04785 1.72514 1.22721 0.85748 0.92358 0.98298 0.87721 1.23303 1.01152 0.92351 0.99044 1.22342 1.00356 0.93500 0.96549 0.88900 1.22224 0.90351 0.95353 0.91347 1.86451 1.50218 1.44882 1.59207 1.23565 1.01512 0.96631 0.96513 1.22857 0.95462 0.94425 1.00607 1.19574 0.92245 0.92871 1.05045 1.19555 0.93495 0.93840 1.03169 1.25406 1.07758 0.98715 0.87938 1.86609 1.38977 1.92772 1.17279 0.93872 0.75405 0.73358 0.88696 1.20893 0.92879 0.98876 0.97937 1.21378 1.01833 0.89554 1.05556 0.90455 0.86606 0.90821 0.74423 0.89122 0.87290 0.92017 0.92355 0.75358 0.88851 0.92066 0.81196 0.86816 0.76433 1.18673 1.23390 0.81696 0.80222 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.66 10.50 -93.19 -0.98 -1.64 16 3 C 0.14 0.38 6.70 22.57 0.15 0.53 16 4 C 0.02 0.16 7.35 23.14 0.17 0.33 16 5 O -0.18 -1.50 10.28 -13.36 -0.14 -1.64 16 6 C -0.03 -0.30 7.07 24.00 0.17 -0.13 16 7 C 0.60 5.65 7.80 86.54 0.67 6.32 16 8 O -0.55 -8.71 16.44 -4.21 -0.07 -8.78 16 9 N -0.69 -1.99 5.36 -443.72 -2.38 -4.36 16 10 C 0.11 0.19 4.21 45.52 0.19 0.38 16 11 H 0.10 0.55 7.50 -2.39 -0.02 0.53 16 12 C -0.12 0.46 7.39 31.12 0.23 0.69 16 13 C -0.11 0.08 4.01 -10.20 -0.04 0.04 16 14 H 0.09 0.14 8.14 -2.39 -0.02 0.12 16 15 C 0.08 -0.20 6.89 71.98 0.50 0.30 16 16 O -0.60 -0.96 13.66 -148.98 -2.04 -2.99 16 17 C -0.14 -0.22 7.45 31.18 0.23 0.02 16 18 C -0.11 -0.99 10.68 23.79 0.25 -0.74 16 19 C -0.10 -0.63 6.16 -20.24 -0.12 -0.75 16 20 C -0.10 -0.14 5.26 -19.87 -0.10 -0.24 16 21 C -0.09 -0.04 2.71 71.23 0.19 0.15 16 22 O -0.55 -2.15 12.88 -148.98 -1.92 -4.07 16 23 Si 0.78 -2.96 30.26 68.60 2.08 -0.88 16 24 C -0.09 0.29 8.62 22.02 0.19 0.48 16 25 C -0.16 0.56 9.03 22.40 0.20 0.76 16 26 H 0.08 -0.82 7.66 -2.39 -0.02 -0.84 16 27 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 28 H 0.07 -0.75 7.66 -2.39 -0.02 -0.77 16 29 H 0.42 -0.55 8.43 -92.71 -0.78 -1.33 16 30 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 31 H 0.11 -0.78 8.07 -2.39 -0.02 -0.80 16 32 H 0.06 -0.30 8.14 -2.38 -0.02 -0.32 16 33 H 0.06 -0.27 7.86 -2.39 -0.02 -0.28 16 34 H 0.40 -2.77 9.12 -74.06 -0.68 -3.45 16 35 H 0.09 0.01 7.91 -2.39 -0.02 -0.01 16 36 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 37 H 0.17 1.44 8.06 -2.91 -0.02 1.41 16 38 H 0.11 0.09 7.96 -2.39 -0.02 0.07 16 39 H 0.39 -1.02 8.70 -74.06 -0.64 -1.66 16 40 H -0.26 0.83 6.68 99.48 0.66 1.49 16 41 H -0.31 -1.47 7.11 99.48 0.71 -0.76 16 42 H 0.17 -1.42 4.81 -2.91 -0.01 -1.43 16 43 H 0.18 -1.89 6.26 -2.91 -0.02 -1.91 16 Total: 0.00 -24.04 365.00 -2.46 -26.49 By element: Atomic # 1 Polarization: -10.26 SS G_CDS: -1.01 Total: -11.28 kcal Atomic # 6 Polarization: 5.15 SS G_CDS: 4.00 Total: 9.15 kcal Atomic # 7 Polarization: -1.99 SS G_CDS: -2.38 Total: -4.36 kcal Atomic # 8 Polarization: -13.98 SS G_CDS: -5.14 Total: -19.12 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: 2.08 Total: -0.88 kcal Total: -24.04 -2.46 -26.49 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_6672420.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.861 kcal (2) G-P(sol) polarization free energy of solvation -24.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.457 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.493 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds