Wall clock time and date at job start Sat Mar 6 2021 19:32:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86301 * 109.46979 * 2 1 4 4 C 1.50700 * 109.46985 * 240.00295 * 2 1 3 5 5 C 1.32769 * 124.70933 * 299.99404 * 4 2 1 6 6 C 1.44426 * 113.08173 * 180.02562 * 5 4 2 7 7 C 1.47195 * 123.46071 * 180.02562 * 6 5 4 8 8 O 1.21632 * 120.00003 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99729 * 180.02562 * 7 6 5 10 10 C 1.46497 * 119.99653 * 180.02562 * 9 7 6 11 11 H 1.09002 * 112.84935 * 334.66222 * 10 9 7 12 12 C 1.53786 * 113.61643 * 105.85894 * 10 9 7 13 13 C 1.54049 * 86.98426 * 140.01639 * 12 10 9 14 14 H 1.09003 * 113.61268 * 89.11946 * 13 12 10 15 15 C 1.53001 * 113.69672 * 220.01213 * 13 12 10 16 16 O 1.42906 * 109.47074 * 272.53604 * 15 13 12 17 17 C 1.53781 * 113.61305 * 203.46742 * 10 9 7 18 18 C 1.36013 * 113.07964 * 0.27373 * 6 5 4 19 19 S 1.70451 * 110.81439 * 359.58901 * 18 6 5 20 20 H 0.96695 * 113.99761 * 60.00258 * 1 2 3 21 21 H 1.09001 * 109.46764 * 120.00029 * 2 1 3 22 22 H 1.48504 * 109.99795 * 60.00054 * 3 2 1 23 23 H 1.48498 * 109.99821 * 181.31467 * 3 2 1 24 24 H 1.07997 * 123.46113 * 359.97438 * 5 4 2 25 25 H 0.96995 * 120.00200 * 359.97438 * 9 7 6 26 26 H 1.08992 * 113.61675 * 254.61383 * 12 10 9 27 27 H 1.09000 * 113.60973 * 25.51671 * 12 10 9 28 28 H 1.09002 * 109.47117 * 32.53319 * 15 13 12 29 29 H 1.08998 * 109.47421 * 152.53611 * 15 13 12 30 30 H 0.96697 * 113.99972 * 179.97438 * 16 15 13 31 31 H 1.08999 * 113.61567 * 334.48111 * 17 10 9 32 32 H 1.08998 * 113.61196 * 105.38466 * 17 10 9 33 33 H 1.07991 * 124.59314 * 179.71318 * 18 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6689 -1.9763 -1.5327 6 6 2.2781 -2.4007 -2.7715 7 6 2.1354 -3.7580 -3.3229 8 8 1.4760 -4.5895 -2.7287 9 7 2.7354 -4.0792 -4.4862 10 6 2.5929 -5.4300 -5.0352 11 1 2.3847 -6.1780 -4.2702 12 6 1.6469 -5.5065 -6.2453 13 6 2.6512 -6.4968 -6.8648 14 1 2.4590 -7.5366 -6.6000 15 6 2.8662 -6.2961 -8.3663 16 8 1.8894 -7.0457 -9.0917 17 6 3.7277 -5.8282 -5.9936 18 6 3.0016 -1.4189 -3.3737 19 16 2.9452 0.0206 -2.4626 20 1 -0.3933 0.4417 -0.7650 21 1 1.7923 -0.5138 0.8900 22 1 1.5614 2.4679 1.2085 23 1 3.5346 1.7703 -0.0320 24 1 1.0629 -2.6226 -0.9152 25 1 3.2610 -3.4160 -4.9602 26 1 0.6787 -5.9509 -6.0152 27 1 1.5636 -4.5685 -6.7942 28 1 2.7664 -5.2382 -8.6094 29 1 3.8640 -6.6391 -8.6396 30 1 1.9655 -6.9649 -10.0523 31 1 4.2122 -4.9781 -6.4739 32 1 4.4382 -6.5323 -5.5603 33 1 3.5375 -1.5350 -4.3040 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12366696_6894386.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:32:27 Heat of formation + Delta-G solvation = -59.906283 kcal Electronic energy + Delta-G solvation = -17922.983631 eV Core-core repulsion = 14849.738762 eV Total energy + Delta-G solvation = -3073.244870 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 270.076 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -41.32008 -39.89283 -38.69267 -37.32904 -37.01223 -34.56977 -31.77270 -28.90942 -26.99738 -26.80804 -25.86092 -23.23224 -21.87091 -21.05933 -20.23075 -19.00223 -18.30521 -18.08837 -17.68040 -17.14471 -16.43808 -16.30592 -15.99391 -15.69364 -15.30730 -15.28664 -14.64825 -14.31523 -14.14557 -13.76066 -13.66455 -13.59648 -13.26503 -12.77215 -12.67682 -12.31430 -12.27411 -11.92423 -11.79954 -11.53847 -10.93692 -10.84411 -10.63502 -10.10441 -10.00382 -9.52493 -5.22769 -0.39068 0.30565 0.65585 0.89915 1.16095 1.52591 1.84336 2.10897 2.35024 3.08791 3.29873 3.37458 3.54933 3.56709 3.74724 3.81395 3.90305 3.97317 4.25035 4.29825 4.36375 4.38504 4.48991 4.56064 4.66695 4.68856 4.75738 4.95360 5.02160 5.02696 5.20509 5.24171 5.51905 6.45051 6.45070 6.63021 7.21464 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.026 4.026 3 Si 0.654 3.346 4 C -0.244 4.244 5 C -0.053 4.053 6 C -0.155 4.155 7 C 0.578 3.422 8 O -0.530 6.530 9 N -0.717 5.717 10 C 0.123 3.877 11 H 0.118 0.882 12 C -0.143 4.143 13 C -0.109 4.109 14 H 0.103 0.897 15 C 0.087 3.913 16 O -0.573 6.573 17 C -0.138 4.138 18 C -0.207 4.207 19 S 0.196 5.804 20 H 0.381 0.619 21 H 0.124 0.876 22 H -0.232 1.232 23 H -0.236 1.236 24 H 0.157 0.843 25 H 0.399 0.601 26 H 0.076 0.924 27 H 0.085 0.915 28 H 0.046 0.954 29 H 0.048 0.952 30 H 0.381 0.619 31 H 0.088 0.912 32 H 0.081 0.919 33 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.572 4.559 -5.260 7.824 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.139 4.139 3 Si 0.553 3.447 4 C -0.360 4.360 5 C -0.082 4.082 6 C -0.174 4.174 7 C 0.364 3.636 8 O -0.408 6.408 9 N -0.367 5.367 10 C 0.019 3.981 11 H 0.136 0.864 12 C -0.182 4.182 13 C -0.128 4.128 14 H 0.121 0.879 15 C 0.009 3.991 16 O -0.378 6.378 17 C -0.176 4.176 18 C -0.345 4.345 19 S 0.462 5.538 20 H 0.229 0.771 21 H 0.141 0.859 22 H -0.155 1.155 23 H -0.160 1.160 24 H 0.174 0.826 25 H 0.234 0.766 26 H 0.095 0.905 27 H 0.103 0.897 28 H 0.065 0.935 29 H 0.066 0.934 30 H 0.228 0.772 31 H 0.106 0.894 32 H 0.100 0.900 33 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 4.111 5.534 -3.411 7.691 hybrid contribution 0.033 -1.595 -0.708 1.746 sum 4.144 3.938 -4.119 7.046 Atomic orbital electron populations 1.86544 1.16526 1.81672 1.49132 1.24453 0.85296 1.09076 0.95101 0.95104 0.82043 0.77519 0.90000 1.24804 1.08641 0.99166 1.03410 1.21056 0.98120 0.94371 0.94667 1.20281 1.04248 0.94822 0.98012 1.17658 0.78976 0.86582 0.80373 1.90825 1.39871 1.50348 1.59713 1.45825 1.53410 1.13900 1.23605 1.22539 0.96596 0.84430 0.94559 0.86370 1.23573 0.98869 0.99497 0.96285 1.22387 0.96966 1.00529 0.92882 0.87873 1.22140 0.91149 0.94534 0.91250 1.86502 1.56232 1.72400 1.22706 1.23356 0.96746 1.01010 0.96522 1.25778 1.04437 0.98983 1.05273 1.83081 1.46783 1.11283 1.12660 0.77137 0.85868 1.15513 1.16046 0.82571 0.76637 0.90495 0.89664 0.93535 0.93398 0.77212 0.89365 0.90037 0.81194 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.07 12.85 -35.23 -0.45 -0.53 16 2 C -0.03 0.01 2.95 36.01 0.11 0.12 16 3 Si 0.65 -1.07 30.91 -169.99 -5.25 -6.33 16 4 C -0.24 0.02 5.68 -36.18 -0.21 -0.18 16 5 C -0.05 -0.09 9.91 -39.02 -0.39 -0.48 16 6 C -0.16 -0.19 5.98 -104.62 -0.63 -0.82 16 7 C 0.58 1.69 7.79 -12.62 -0.10 1.59 16 8 O -0.53 -3.75 16.41 5.25 0.09 -3.66 16 9 N -0.72 0.21 5.33 -54.16 -0.29 -0.08 16 10 C 0.12 -0.01 4.21 -67.12 -0.28 -0.29 16 11 H 0.12 0.21 7.50 -51.93 -0.39 -0.17 16 12 C -0.14 0.01 7.45 -25.77 -0.19 -0.19 16 13 C -0.11 0.09 4.01 -89.67 -0.36 -0.27 16 14 H 0.10 0.02 8.14 -51.93 -0.42 -0.41 16 15 C 0.09 -0.11 6.89 37.16 0.26 0.15 16 16 O -0.57 -0.31 13.66 -35.23 -0.48 -0.79 16 17 C -0.14 0.30 7.39 -25.92 -0.19 0.11 16 18 C -0.21 0.33 10.38 29.93 0.31 0.64 16 19 S 0.20 -0.37 20.18 -107.50 -2.17 -2.54 16 20 H 0.38 -1.44 8.70 45.56 0.40 -1.04 16 21 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 22 H -0.23 -0.29 7.11 56.52 0.40 0.12 16 23 H -0.24 -0.04 7.11 56.52 0.40 0.36 16 24 H 0.16 0.45 8.06 -52.49 -0.42 0.03 16 25 H 0.40 -1.30 7.21 -40.82 -0.29 -1.59 16 26 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 27 H 0.08 -0.06 7.91 -51.93 -0.41 -0.47 16 28 H 0.05 -0.11 7.85 -51.93 -0.41 -0.51 16 29 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.38 -1.40 9.12 45.56 0.42 -0.99 16 31 H 0.09 -0.32 8.07 -51.93 -0.42 -0.74 16 32 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 33 H 0.17 -0.79 7.01 -52.49 -0.37 -1.15 16 LS Contribution 298.16 15.07 4.49 4.49 Total: 0.00 -8.57 298.16 -8.94 -17.51 By element: Atomic # 1 Polarization: -5.25 SS G_CDS: -3.20 Total: -8.46 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -1.67 Total: 0.38 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.29 Total: -0.08 kcal Atomic # 8 Polarization: -4.13 SS G_CDS: -0.85 Total: -4.98 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.25 Total: -6.33 kcal Atomic # 16 Polarization: -0.37 SS G_CDS: -2.17 Total: -2.54 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -8.57 -8.94 -17.51 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12366696_6894386.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.396 kcal (2) G-P(sol) polarization free energy of solvation -8.572 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.968 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.906 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds