Wall clock time and date at job start Sat Mar 6 2021 17:21:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52999 * 109.46862 * 2 1 4 4 C 1.53004 * 109.46838 * 240.00346 * 2 1 3 5 5 O 1.45195 * 109.46975 * 120.00347 * 2 1 3 6 6 C 1.34634 * 117.00461 * 60.00268 * 5 2 1 7 7 O 1.21516 * 119.99477 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00332 * 179.97438 * 6 5 2 9 9 C 1.46502 * 120.00094 * 180.02562 * 8 6 5 10 10 H 1.08999 * 109.47134 * 34.99840 * 9 8 6 11 11 C 1.52992 * 109.47129 * 155.00003 * 9 8 6 12 12 C 1.53001 * 109.46887 * 179.97438 * 11 9 8 13 13 C 1.52995 * 109.47515 * 299.99853 * 12 11 9 14 14 H 1.08999 * 109.47160 * 300.00116 * 13 12 11 15 15 N 1.46499 * 109.47477 * 180.02562 * 13 12 11 16 16 C 1.34775 * 119.99975 * 155.00106 * 15 13 12 17 17 O 1.21692 * 120.00223 * 0.02562 * 16 15 13 18 18 C 1.46679 * 119.99811 * 179.97438 * 16 15 13 19 19 C 1.37871 * 126.23346 * 179.97438 * 18 16 15 20 20 C 1.39840 * 107.08457 * 179.74098 * 19 18 16 21 21 C 1.50700 * 126.06782 * 180.26512 * 20 19 18 22 22 O 1.42900 * 109.47207 * 64.99870 * 21 20 19 23 23 Si 1.86295 * 109.47390 * 184.99977 * 21 20 19 24 24 C 1.35450 * 107.86634 * 0.24155 * 20 19 18 25 25 N 1.35531 * 108.86856 * 0.02562 * 24 20 19 26 26 C 1.53003 * 109.47217 * 60.00020 * 13 12 11 27 27 C 1.53001 * 109.46862 * 300.00380 * 26 13 12 28 28 H 1.09001 * 109.47348 * 299.99604 * 1 2 3 29 29 H 1.08998 * 109.47796 * 59.99525 * 1 2 3 30 30 H 1.09000 * 109.47344 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47080 * 179.97438 * 3 2 1 32 32 H 1.08995 * 109.47947 * 300.00421 * 3 2 1 33 33 H 1.09003 * 109.46850 * 60.00616 * 3 2 1 34 34 H 1.08990 * 109.47170 * 300.00041 * 4 2 1 35 35 H 1.09003 * 109.46745 * 59.99998 * 4 2 1 36 36 H 1.09003 * 109.46644 * 179.97438 * 4 2 1 37 37 H 0.97002 * 119.99980 * 359.97438 * 8 6 5 38 38 H 1.08999 * 109.47246 * 59.99905 * 11 9 8 39 39 H 1.08999 * 109.47276 * 299.99439 * 11 9 8 40 40 H 1.09001 * 109.47225 * 179.97438 * 12 11 9 41 41 H 1.09000 * 109.47518 * 59.99969 * 12 11 9 42 42 H 0.97000 * 119.99630 * 334.99703 * 15 13 12 43 43 H 1.08002 * 126.45965 * 0.02562 * 19 18 16 44 44 H 1.09004 * 109.47148 * 305.00042 * 21 20 19 45 45 H 0.96698 * 113.99899 * 59.99713 * 22 21 20 46 46 H 1.48506 * 110.00035 * 58.67977 * 23 21 20 47 47 H 1.48501 * 110.00248 * 179.97438 * 23 21 20 48 48 H 1.07998 * 125.56812 * 179.97438 * 24 20 19 49 49 H 0.97008 * 125.67722 * 179.97438 * 25 24 20 50 50 H 1.08999 * 109.46977 * 59.99984 * 26 13 12 51 51 H 1.08992 * 109.47603 * 180.02562 * 26 13 12 52 52 H 1.09000 * 109.47518 * 299.99687 * 27 26 13 53 53 H 1.09001 * 109.47225 * 179.97438 * 27 26 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0139 -0.6845 1.1855 6 6 1.6523 -1.9724 1.3382 7 8 0.9509 -2.5094 0.5038 8 7 2.0680 -2.6658 2.4165 9 6 1.6749 -4.0673 2.5824 10 1 1.6284 -4.5496 1.6060 11 6 2.7041 -4.7855 3.4574 12 6 2.2931 -6.2490 3.6312 13 6 0.9188 -6.3170 4.3001 14 1 0.9657 -5.8344 5.2763 15 7 0.5256 -7.7183 4.4670 16 6 -0.3465 -8.0627 5.4350 17 8 -0.8078 -7.2097 6.1702 18 6 -0.7406 -9.4657 5.6017 19 6 -1.6177 -9.9594 6.5440 20 6 -1.7058 -11.3400 6.3399 21 6 -2.5530 -12.3018 7.1324 22 8 -3.9347 -12.0010 6.9261 23 14 -2.2061 -14.0437 6.5703 24 6 -0.8948 -11.6593 5.3030 25 7 -0.2996 -10.5299 4.8482 26 6 -0.1104 -5.5987 3.4250 27 6 0.3005 -4.1352 3.2513 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3634 -1.0276 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6766 1.9565 -0.8899 33 1 1.6766 1.9563 0.8901 34 1 1.6766 -1.7488 -1.2494 35 1 1.6765 -0.2072 -2.1393 36 1 3.1299 -0.7208 -1.2495 37 1 2.6282 -2.2371 3.0824 38 1 2.7506 -4.3032 4.4338 39 1 3.6832 -4.7368 2.9811 40 1 3.0265 -6.7608 4.2542 41 1 2.2462 -6.7316 2.6550 42 1 0.8930 -8.3982 3.8807 43 1 -2.1419 -9.3870 7.2951 44 1 -2.3150 -12.2077 8.1920 45 1 -4.2176 -12.0648 6.0036 46 1 -0.7659 -14.3581 6.7500 47 1 -3.0351 -15.0020 7.3447 48 1 -0.7461 -12.6520 4.9044 49 1 0.3295 -10.4792 4.1114 50 1 -0.1573 -6.0812 2.4488 51 1 -1.0894 -5.6467 3.9018 52 1 0.3474 -3.6526 4.2275 53 1 -0.4325 -3.6235 2.6276 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12463208_10543058.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:21:19 Heat of formation + Delta-G solvation = -116.210477 kcal Electronic energy + Delta-G solvation = -33208.835885 eV Core-core repulsion = 28661.237508 eV Total energy + Delta-G solvation = -4547.598377 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.203 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.48389 -41.91534 -40.81919 -39.52406 -38.00014 -37.63186 -36.14768 -35.16900 -33.98870 -32.51109 -31.91276 -30.93034 -29.36445 -28.38996 -28.32249 -26.49705 -24.85501 -24.04724 -23.53521 -22.33186 -21.55327 -21.25343 -20.93190 -20.63053 -19.89806 -19.10854 -17.83715 -17.63639 -17.30658 -17.19335 -16.99139 -16.58858 -16.44983 -15.95712 -15.75434 -15.57273 -15.49688 -15.16633 -15.12663 -14.87002 -14.56970 -14.48172 -14.41927 -14.12826 -13.92989 -13.73982 -13.48015 -13.37228 -13.32714 -13.17085 -12.94343 -12.88797 -12.82602 -12.66390 -12.39794 -12.30274 -12.26252 -12.20983 -11.96656 -11.59085 -11.57183 -11.40682 -11.31809 -11.11237 -10.32753 -10.32100 -10.17913 -9.95038 -9.28120 -4.92739 0.36441 1.13843 1.42398 1.53158 1.73808 1.74516 1.92699 2.10175 2.15426 2.26034 3.10873 3.55575 3.57454 3.69090 3.72272 3.77343 3.80034 3.90380 3.92375 3.99179 4.04456 4.09206 4.18666 4.27748 4.30605 4.38059 4.39080 4.50732 4.58636 4.59151 4.66125 4.66461 4.72080 4.74231 4.82376 4.85417 4.86991 4.93528 5.01561 5.03320 5.05316 5.07039 5.07800 5.17729 5.22306 5.24794 5.28161 5.37341 5.41214 5.58067 5.59270 5.73449 6.36486 6.38306 6.54220 6.90801 7.06793 7.32808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.643 3.357 7 O -0.592 6.592 8 N -0.698 5.698 9 C 0.166 3.834 10 H 0.084 0.916 11 C -0.117 4.117 12 C -0.113 4.113 13 C 0.146 3.854 14 H 0.074 0.926 15 N -0.710 5.710 16 C 0.589 3.411 17 O -0.576 6.576 18 C -0.070 4.070 19 C -0.108 4.108 20 C -0.230 4.230 21 C -0.054 4.054 22 O -0.567 6.567 23 Si 0.804 3.196 24 C 0.062 3.938 25 N -0.514 5.514 26 C -0.119 4.119 27 C -0.123 4.123 28 H 0.059 0.941 29 H 0.086 0.914 30 H 0.063 0.937 31 H 0.070 0.930 32 H 0.098 0.902 33 H 0.067 0.933 34 H 0.064 0.936 35 H 0.086 0.914 36 H 0.063 0.937 37 H 0.416 0.584 38 H 0.082 0.918 39 H 0.094 0.906 40 H 0.093 0.907 41 H 0.090 0.910 42 H 0.412 0.588 43 H 0.121 0.879 44 H 0.090 0.910 45 H 0.393 0.607 46 H -0.273 1.273 47 H -0.311 1.311 48 H 0.218 0.782 49 H 0.438 0.562 50 H 0.076 0.924 51 H 0.047 0.953 52 H 0.068 0.932 53 H 0.050 0.950 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.782 -3.333 -6.568 10.012 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.236 4.236 5 O -0.285 6.285 6 C 0.397 3.603 7 O -0.483 6.483 8 N -0.357 5.357 9 C 0.062 3.938 10 H 0.102 0.898 11 C -0.155 4.155 12 C -0.151 4.151 13 C 0.042 3.958 14 H 0.092 0.908 15 N -0.361 5.361 16 C 0.377 3.623 17 O -0.455 6.455 18 C -0.183 4.183 19 C -0.135 4.135 20 C -0.236 4.236 21 C -0.163 4.163 22 O -0.375 6.375 23 Si 0.709 3.291 24 C -0.076 4.076 25 N -0.111 5.111 26 C -0.158 4.158 27 C -0.163 4.163 28 H 0.078 0.922 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.089 0.911 32 H 0.117 0.883 33 H 0.087 0.913 34 H 0.083 0.917 35 H 0.105 0.895 36 H 0.082 0.918 37 H 0.253 0.747 38 H 0.101 0.899 39 H 0.112 0.888 40 H 0.112 0.888 41 H 0.108 0.892 42 H 0.249 0.751 43 H 0.139 0.861 44 H 0.107 0.893 45 H 0.243 0.757 46 H -0.200 1.200 47 H -0.239 1.239 48 H 0.235 0.765 49 H 0.280 0.720 50 H 0.095 0.905 51 H 0.066 0.934 52 H 0.086 0.914 53 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges 6.573 -3.502 -5.798 9.439 hybrid contribution 0.094 0.755 0.578 0.956 sum 6.668 -2.747 -5.220 8.902 Atomic orbital electron populations 1.22474 0.94227 1.03658 1.03398 1.22338 0.94316 0.92603 0.81625 1.21892 1.02508 0.90936 1.04175 1.22465 1.01677 1.02260 0.97206 1.86310 1.71575 1.23388 1.47266 1.18373 0.78665 0.80762 0.82508 1.90903 1.42045 1.70874 1.44481 1.44834 1.55057 1.12693 1.23138 1.21051 0.93986 0.78463 1.00255 0.89811 1.21732 0.98484 0.94790 1.00495 1.21709 0.94254 0.96742 1.02413 1.21055 0.94671 0.80559 0.99518 0.90824 1.45749 1.45640 1.10369 1.34313 1.17256 0.78570 0.86249 0.80189 1.90852 1.56415 1.51273 1.46968 1.20124 1.08389 0.87693 1.02073 1.21223 0.98513 0.94999 0.98730 1.19957 1.06439 0.94408 1.02800 1.24761 0.82222 1.08564 1.00730 1.86457 1.23678 1.93413 1.33912 0.93929 0.76922 0.70165 0.88133 1.22395 0.96309 0.92373 0.96549 1.41852 1.35911 1.05343 1.28013 1.21776 0.98614 0.94973 1.00422 1.21836 0.96960 0.96505 1.00956 0.92193 0.89476 0.91782 0.91073 0.88329 0.91347 0.91675 0.89536 0.91824 0.74690 0.89943 0.88754 0.88833 0.89162 0.75082 0.86142 0.89253 0.75711 1.19981 1.23912 0.76538 0.72031 0.90531 0.93425 0.91366 0.93104 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.68 8.37 71.98 0.60 -0.08 16 2 C 0.13 0.39 1.13 -10.79 -0.01 0.37 16 3 C -0.14 0.26 8.85 71.98 0.64 0.90 16 4 C -0.18 -0.50 8.37 71.98 0.60 0.10 16 5 O -0.37 -2.04 9.94 -55.43 -0.55 -2.59 16 6 C 0.64 4.07 8.02 129.79 1.04 5.11 16 7 O -0.59 -6.74 11.54 19.79 0.23 -6.52 16 8 N -0.70 0.15 5.08 -570.13 -2.90 -2.74 16 9 C 0.17 -0.37 2.45 44.99 0.11 -0.26 16 10 H 0.08 0.03 7.58 -2.39 -0.02 0.02 16 11 C -0.12 0.94 5.39 30.59 0.16 1.10 16 12 C -0.11 1.03 5.39 30.59 0.16 1.19 16 13 C 0.15 -0.39 2.45 44.99 0.11 -0.28 16 14 H 0.07 0.16 7.58 -2.39 -0.02 0.15 16 15 N -0.71 2.45 5.07 -446.51 -2.27 0.19 16 16 C 0.59 3.12 7.75 86.45 0.67 3.79 16 17 O -0.58 -8.87 16.54 -4.32 -0.07 -8.94 16 18 C -0.07 -0.17 7.06 40.35 0.28 0.12 16 19 C -0.11 -0.72 10.59 22.57 0.24 -0.48 16 20 C -0.23 -0.12 5.43 -20.12 -0.11 -0.23 16 21 C -0.05 -0.05 3.02 71.24 0.22 0.17 16 22 O -0.57 -1.84 12.88 -148.98 -1.92 -3.76 16 23 Si 0.80 -3.69 30.60 68.60 2.10 -1.59 16 24 C 0.06 -0.43 10.45 83.48 0.87 0.44 16 25 N -0.51 3.74 5.99 -183.63 -1.10 2.64 16 26 C -0.12 -0.04 5.50 30.60 0.17 0.13 16 27 C -0.12 -0.12 5.49 30.60 0.17 0.05 16 28 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 29 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 30 H 0.06 0.58 5.88 -2.39 -0.01 0.56 16 31 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 32 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 33 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 34 H 0.06 0.51 5.88 -2.39 -0.01 0.50 16 35 H 0.09 -0.05 8.14 -2.39 -0.02 -0.06 16 36 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 37 H 0.42 -1.92 8.71 -92.71 -0.81 -2.73 16 38 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 39 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 40 H 0.09 -1.02 8.14 -2.39 -0.02 -1.04 16 41 H 0.09 -1.05 8.14 -2.39 -0.02 -1.06 16 42 H 0.41 -4.62 7.73 -92.71 -0.72 -5.33 16 43 H 0.12 1.38 8.06 -2.91 -0.02 1.36 16 44 H 0.09 0.37 7.96 -2.38 -0.02 0.35 16 45 H 0.39 -2.21 8.70 -74.06 -0.64 -2.85 16 46 H -0.27 0.48 7.11 99.48 0.71 1.19 16 47 H -0.31 -1.43 7.11 99.48 0.71 -0.72 16 48 H 0.22 -3.38 6.21 -2.91 -0.02 -3.40 16 49 H 0.44 -6.77 8.19 -92.70 -0.76 -7.53 16 50 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 51 H 0.05 0.30 8.14 -2.39 -0.02 0.28 16 52 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 53 H 0.05 0.31 8.14 -2.39 -0.02 0.29 16 Total: 0.00 -31.02 422.19 -2.48 -33.50 By element: Atomic # 1 Polarization: -20.40 SS G_CDS: -1.93 Total: -22.33 kcal Atomic # 6 Polarization: 6.22 SS G_CDS: 5.93 Total: 12.15 kcal Atomic # 7 Polarization: 6.34 SS G_CDS: -6.26 Total: 0.08 kcal Atomic # 8 Polarization: -19.49 SS G_CDS: -2.31 Total: -21.80 kcal Atomic # 14 Polarization: -3.69 SS G_CDS: 2.10 Total: -1.59 kcal Total: -31.02 -2.48 -33.50 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12463208_10543058.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.711 kcal (2) G-P(sol) polarization free energy of solvation -31.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.734 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.476 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.499 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.210 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds