Wall clock time and date at job start Sun Mar 7 2021 03:36:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86295 * 109.47781 * 2 1 4 4 C 1.50704 * 109.46787 * 239.99805 * 2 1 3 5 5 C 1.37855 * 119.89355 * 300.00471 * 4 2 1 6 6 C 1.39657 * 119.87840 * 179.97438 * 5 4 2 7 7 C 1.47697 * 120.16777 * 179.97438 * 6 5 4 8 8 O 1.21565 * 120.00434 * 179.97438 * 7 6 5 9 9 N 1.34779 * 119.99627 * 0.02562 * 7 6 5 10 10 C 1.46500 * 119.99793 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.47092 * 34.99824 * 10 9 7 12 12 C 1.52997 * 109.47007 * 154.99772 * 10 9 7 13 13 C 1.52999 * 109.47317 * 179.97438 * 12 10 9 14 14 C 1.53005 * 109.47159 * 300.00546 * 13 12 10 15 15 H 1.09002 * 109.46935 * 299.99411 * 14 13 12 16 16 O 1.42906 * 109.47029 * 179.97438 * 14 13 12 17 17 C 1.35695 * 117.00216 * 149.99955 * 16 14 13 18 18 N 1.32223 * 119.68674 * 359.72441 * 17 16 14 19 19 C 1.31981 * 121.65598 * 179.71401 * 18 17 16 20 20 C 1.38036 * 120.86056 * 0.56462 * 19 18 17 21 21 C 1.38829 * 119.29816 * 359.72054 * 20 19 18 22 22 C 1.38465 * 118.47293 * 0.02562 * 21 20 19 23 23 Cl 1.73605 * 120.45251 * 179.97438 * 22 21 20 24 24 C 1.52997 * 109.47452 * 59.99536 * 14 13 12 25 25 C 1.53000 * 109.47023 * 274.99565 * 10 9 7 26 26 C 1.39827 * 119.66733 * 0.25537 * 6 5 4 27 27 F 1.35099 * 120.10977 * 179.72752 * 26 6 5 28 28 C 1.38318 * 119.77694 * 359.47024 * 26 6 5 29 29 C 1.38197 * 120.11721 * 0.52968 * 28 26 6 30 30 H 0.96708 * 113.99835 * 59.99126 * 1 2 3 31 31 H 1.08999 * 109.46856 * 120.00509 * 2 1 3 32 32 H 1.48504 * 109.99970 * 298.68438 * 3 2 1 33 33 H 1.48503 * 109.99927 * 59.99848 * 3 2 1 34 34 H 1.07998 * 120.05867 * 359.97415 * 5 4 2 35 35 H 0.97004 * 119.99983 * 359.97438 * 9 7 6 36 36 H 1.08996 * 109.47853 * 300.00060 * 12 10 9 37 37 H 1.09002 * 109.47153 * 60.00089 * 12 10 9 38 38 H 1.09002 * 109.46716 * 60.00091 * 13 12 10 39 39 H 1.09000 * 109.47486 * 180.02562 * 13 12 10 40 40 H 1.08003 * 119.57459 * 180.29031 * 19 18 17 41 41 H 1.08005 * 120.35235 * 179.70433 * 20 19 18 42 42 H 1.08005 * 120.76528 * 179.97438 * 21 20 19 43 43 H 1.09002 * 109.46695 * 59.99734 * 24 14 13 44 44 H 1.08993 * 109.47194 * 179.97438 * 24 14 13 45 45 H 1.08992 * 109.47399 * 300.00063 * 25 10 9 46 46 H 1.09004 * 109.46724 * 60.00549 * 25 10 9 47 47 H 1.08003 * 119.93893 * 180.27617 * 28 26 6 48 48 H 1.08005 * 119.82922 * 179.72542 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9312 -0.7105 -1.2305 5 6 1.5967 -2.0303 -1.4465 6 6 2.0619 -2.6882 -2.5871 7 6 1.7079 -4.1023 -2.8246 8 8 2.1140 -4.6720 -3.8187 9 7 0.9336 -4.7609 -1.9395 10 6 0.5820 -6.1634 -2.1753 11 1 1.4179 -6.6717 -2.6558 12 6 0.2715 -6.8427 -0.8400 13 6 -0.0964 -8.3072 -1.0862 14 6 -1.3266 -8.3786 -1.9931 15 1 -2.1623 -7.8700 -1.5123 16 8 -1.6698 -9.7466 -2.2235 17 6 -2.9808 -10.0256 -2.4350 18 7 -3.8701 -9.0473 -2.4151 19 6 -5.1538 -9.2738 -2.6214 20 6 -5.6185 -10.5523 -2.8558 21 6 -4.7181 -11.6088 -2.8794 22 6 -3.3772 -11.3382 -2.6647 23 17 -2.2070 -12.6205 -2.6823 24 6 -1.0161 -7.6993 -3.3283 25 6 -0.6481 -6.2352 -3.0822 26 6 2.8693 -2.0032 -3.5003 27 9 3.3288 -2.6326 -4.6039 28 6 3.1917 -0.6775 -3.2726 29 6 2.7264 -0.0352 -2.1409 30 1 -0.3933 0.4419 -0.7650 31 1 1.7922 -0.5139 0.8899 32 1 1.5880 2.4585 -1.2242 33 1 1.5617 2.4678 1.2085 34 1 0.9761 -2.5544 -0.7348 35 1 0.6092 -4.3062 -1.1464 36 1 1.1477 -6.7915 -0.1938 37 1 -0.5645 -6.3344 -0.3594 38 1 0.7393 -8.8158 -1.5669 39 1 -0.3180 -8.7911 -0.1350 40 1 -5.8505 -8.4488 -2.6022 41 1 -6.6714 -10.7290 -3.0189 42 1 -5.0558 -12.6186 -3.0603 43 1 -0.1804 -8.2079 -3.8090 44 1 -1.8924 -7.7505 -3.9745 45 1 -1.4840 -5.7269 -2.6017 46 1 -0.4268 -5.7513 -4.0335 47 1 3.8115 -0.1446 -3.9785 48 1 2.9846 0.9987 -1.9655 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12496662_12335834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:36:12 Heat of formation + Delta-G solvation = -87.155820 kcal Electronic energy + Delta-G solvation = -35447.681775 eV Core-core repulsion = 30409.905933 eV Total energy + Delta-G solvation = -5037.775843 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.113 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -49.85966 -41.89469 -41.40504 -40.37717 -39.58285 -38.03076 -37.64488 -37.51657 -35.02479 -33.43765 -32.89950 -32.39753 -31.96669 -31.46355 -29.54470 -26.77204 -25.74739 -24.98322 -24.48966 -23.88452 -23.50119 -22.50600 -21.54705 -21.03699 -19.62611 -19.28009 -18.43348 -18.35545 -18.17173 -17.61694 -17.40645 -16.91844 -16.85404 -16.74801 -16.36112 -16.24500 -16.01781 -15.96094 -15.74144 -15.56583 -15.20703 -14.91232 -14.71365 -14.54212 -14.46682 -14.36684 -14.23618 -13.96335 -13.65903 -13.45007 -13.36254 -13.28773 -13.08701 -12.95136 -12.88269 -12.70048 -12.41931 -12.26026 -12.19020 -12.02970 -11.86057 -11.54604 -11.30581 -11.07394 -10.78512 -10.75122 -10.71085 -10.42736 -10.11130 -9.86485 -9.45845 -5.11149 -0.52634 -0.13219 -0.12382 0.09138 1.09617 1.10391 1.44422 1.65459 1.77717 1.83103 2.01522 2.47057 2.56103 3.00198 3.13801 3.17177 3.33289 3.39549 3.46518 3.54810 3.57136 3.67076 3.78801 3.84750 3.89948 3.93269 3.99012 4.05959 4.11266 4.19495 4.28035 4.29484 4.32602 4.35481 4.44034 4.57422 4.64329 4.68467 4.69883 4.74650 4.84050 4.87332 4.90317 4.93635 5.01226 5.01642 5.09526 5.15766 5.19590 5.30677 5.41971 5.52127 6.14836 6.20581 6.37094 6.64791 7.13229 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.073 4.073 3 Si 0.684 3.316 4 C -0.139 4.139 5 C -0.031 4.031 6 C -0.175 4.175 7 C 0.560 3.440 8 O -0.518 6.518 9 N -0.721 5.721 10 C 0.143 3.857 11 H 0.095 0.905 12 C -0.121 4.121 13 C -0.113 4.113 14 C 0.089 3.911 15 H 0.093 0.907 16 O -0.288 6.288 17 C 0.338 3.662 18 N -0.526 5.526 19 C 0.144 3.856 20 C -0.201 4.201 21 C -0.032 4.032 22 C -0.114 4.114 23 Cl -0.041 7.041 24 C -0.131 4.131 25 C -0.124 4.124 26 C 0.167 3.833 27 F -0.111 7.111 28 C -0.157 4.157 29 C -0.060 4.060 30 H 0.378 0.622 31 H 0.123 0.877 32 H -0.257 1.257 33 H -0.254 1.254 34 H 0.139 0.861 35 H 0.400 0.600 36 H 0.081 0.919 37 H 0.074 0.926 38 H 0.079 0.921 39 H 0.079 0.921 40 H 0.167 0.833 41 H 0.148 0.852 42 H 0.152 0.848 43 H 0.074 0.926 44 H 0.072 0.928 45 H 0.069 0.931 46 H 0.075 0.925 47 H 0.150 0.850 48 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.060 3.443 3.842 5.555 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.183 4.183 3 Si 0.584 3.416 4 C -0.140 4.140 5 C -0.050 4.050 6 C -0.179 4.179 7 C 0.346 3.654 8 O -0.394 6.394 9 N -0.374 5.374 10 C 0.039 3.961 11 H 0.113 0.887 12 C -0.160 4.160 13 C -0.151 4.151 14 C 0.033 3.967 15 H 0.111 0.889 16 O -0.194 6.194 17 C 0.158 3.842 18 N -0.250 5.250 19 C -0.011 4.011 20 C -0.221 4.221 21 C -0.058 4.058 22 C -0.143 4.143 23 Cl -0.013 7.013 24 C -0.169 4.169 25 C -0.162 4.162 26 C 0.146 3.854 27 F -0.088 7.088 28 C -0.175 4.175 29 C -0.078 4.078 30 H 0.226 0.774 31 H 0.141 0.859 32 H -0.182 1.182 33 H -0.179 1.179 34 H 0.157 0.843 35 H 0.236 0.764 36 H 0.100 0.900 37 H 0.092 0.908 38 H 0.098 0.902 39 H 0.098 0.902 40 H 0.184 0.816 41 H 0.166 0.834 42 H 0.170 0.830 43 H 0.093 0.907 44 H 0.091 0.909 45 H 0.087 0.913 46 H 0.093 0.907 47 H 0.168 0.832 48 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.210 4.083 3.800 5.707 hybrid contribution -1.498 -0.831 -0.571 1.806 sum -2.708 3.252 3.229 5.323 Atomic orbital electron populations 1.86613 1.17422 1.79931 1.49508 1.25017 0.84162 1.11127 0.97968 0.95009 0.91589 0.74224 0.80749 1.20276 1.00689 0.94891 0.98116 1.21022 0.95775 0.93663 0.94529 1.20087 1.04525 0.95326 0.97956 1.17970 0.78541 0.85615 0.83243 1.90877 1.52997 1.68245 1.27313 1.45924 1.52507 1.13052 1.25868 1.21095 0.98214 0.80710 0.96064 0.88733 1.21751 1.02696 0.94995 0.96509 1.21543 0.97190 0.96356 1.00027 1.22502 0.98250 0.79388 0.96559 0.88887 1.86375 1.18851 1.30177 1.84016 1.19504 0.85359 0.88186 0.91164 1.67469 1.03902 1.33797 1.19872 1.22599 0.90308 0.96797 0.91411 1.22049 1.01557 0.92979 1.05536 1.21473 0.89796 1.01179 0.93330 1.20944 0.92231 0.88495 1.12678 1.98400 1.57639 1.48193 1.97020 1.21888 1.02728 0.95342 0.96953 1.21837 0.97474 0.96145 1.00779 1.17764 0.93600 0.90529 0.83465 1.91633 1.85842 1.82005 1.49364 1.21170 1.03541 0.92899 0.99931 1.21095 0.94564 0.99822 0.92281 0.77417 0.85895 1.18214 1.17859 0.84316 0.76440 0.90016 0.90775 0.90199 0.90215 0.81557 0.83448 0.83043 0.90730 0.90919 0.91251 0.90666 0.83244 0.84067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.72 12.76 -35.23 -0.45 0.27 16 2 C -0.07 0.20 2.82 36.01 0.10 0.31 16 3 Si 0.68 -2.06 29.78 -169.99 -5.06 -7.12 16 4 C -0.14 0.31 5.39 -104.68 -0.56 -0.25 16 5 C -0.03 0.05 9.09 -39.19 -0.36 -0.31 16 6 C -0.17 -0.20 5.88 -104.91 -0.62 -0.81 16 7 C 0.56 1.55 7.73 -12.40 -0.10 1.46 16 8 O -0.52 -3.58 15.00 5.31 0.08 -3.50 16 9 N -0.72 0.29 5.03 -54.80 -0.28 0.01 16 10 C 0.14 -0.02 2.45 -67.93 -0.17 -0.19 16 11 H 0.09 0.18 7.58 -51.93 -0.39 -0.22 16 12 C -0.12 0.25 5.39 -26.73 -0.14 0.11 16 13 C -0.11 0.09 5.57 -26.73 -0.15 -0.06 16 14 C 0.09 0.07 2.38 -26.73 -0.06 0.00 16 15 H 0.09 0.09 6.98 -51.93 -0.36 -0.28 16 16 O -0.29 -0.80 9.24 -18.79 -0.17 -0.97 16 17 C 0.34 0.92 7.45 -17.09 -0.13 0.79 16 18 N -0.53 -0.96 8.64 -13.30 -0.11 -1.08 16 19 C 0.14 -0.08 11.17 -17.56 -0.20 -0.27 16 20 C -0.20 0.29 10.10 -39.44 -0.40 -0.11 16 21 C -0.03 0.01 9.97 -39.28 -0.39 -0.38 16 22 C -0.11 -0.23 6.36 -39.21 -0.25 -0.48 16 23 Cl -0.04 -0.10 28.54 -51.86 -1.48 -1.58 16 24 C -0.13 -0.13 5.54 -26.76 -0.15 -0.28 16 25 C -0.12 -0.05 5.49 -26.75 -0.15 -0.20 16 26 C 0.17 0.31 7.29 -38.96 -0.28 0.03 16 27 F -0.11 -0.53 15.55 2.25 0.04 -0.49 16 28 C -0.16 0.16 10.01 -39.57 -0.40 -0.23 16 29 C -0.06 0.15 8.66 -39.51 -0.34 -0.19 16 30 H 0.38 -1.47 8.70 45.56 0.40 -1.08 16 31 H 0.12 -0.46 7.96 -51.93 -0.41 -0.87 16 32 H -0.26 0.28 7.11 56.52 0.40 0.68 16 33 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 34 H 0.14 -0.48 6.41 -52.49 -0.34 -0.81 16 35 H 0.40 -1.22 6.64 -40.82 -0.27 -1.49 16 36 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.17 -0.56 8.06 -52.48 -0.42 -0.99 16 41 H 0.15 -0.60 8.06 -52.48 -0.42 -1.02 16 42 H 0.15 -0.36 8.06 -52.48 -0.42 -0.78 16 43 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 44 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 45 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 46 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 47 H 0.15 -0.43 8.06 -52.48 -0.42 -0.86 16 48 H 0.14 -0.66 4.86 -52.48 -0.25 -0.92 16 LS Contribution 414.00 15.07 6.24 6.24 Total: 0.00 -9.34 414.00 -11.84 -21.18 By element: Atomic # 1 Polarization: -5.97 SS G_CDS: -5.91 Total: -11.88 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: -4.74 Total: -1.08 kcal Atomic # 7 Polarization: -0.68 SS G_CDS: -0.39 Total: -1.07 kcal Atomic # 8 Polarization: -3.66 SS G_CDS: -0.54 Total: -4.20 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -2.06 SS G_CDS: -5.06 Total: -7.12 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.48 Total: -1.58 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -9.34 -11.84 -21.18 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12496662_12335834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.972 kcal (2) G-P(sol) polarization free energy of solvation -9.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.313 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.843 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.184 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.156 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds