Wall clock time and date at job start Sun Mar 7 2021 03:36:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86295 * 109.47781 * 2 1 4 4 C 1.50704 * 109.46787 * 239.99805 * 2 1 3 5 5 C 1.37855 * 119.89355 * 300.00471 * 4 2 1 6 6 C 1.39657 * 119.87840 * 179.97438 * 5 4 2 7 7 C 1.47697 * 120.16777 * 179.97438 * 6 5 4 8 8 O 1.21565 * 120.00434 * 179.97438 * 7 6 5 9 9 N 1.34779 * 119.99627 * 0.02562 * 7 6 5 10 10 C 1.46500 * 119.99793 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.47092 * 34.99824 * 10 9 7 12 12 C 1.52997 * 109.47007 * 154.99772 * 10 9 7 13 13 C 1.52999 * 109.47317 * 179.97438 * 12 10 9 14 14 C 1.53005 * 109.47159 * 300.00546 * 13 12 10 15 15 H 1.09002 * 109.46935 * 299.99411 * 14 13 12 16 16 O 1.42906 * 109.47029 * 179.97438 * 14 13 12 17 17 C 1.35695 * 117.00216 * 149.99955 * 16 14 13 18 18 N 1.32223 * 119.68674 * 359.72441 * 17 16 14 19 19 C 1.31981 * 121.65598 * 179.71401 * 18 17 16 20 20 C 1.38036 * 120.86056 * 0.56462 * 19 18 17 21 21 C 1.38829 * 119.29816 * 359.72054 * 20 19 18 22 22 C 1.38465 * 118.47293 * 0.02562 * 21 20 19 23 23 Cl 1.73605 * 120.45251 * 179.97438 * 22 21 20 24 24 C 1.52997 * 109.47452 * 59.99536 * 14 13 12 25 25 C 1.53000 * 109.47023 * 274.99565 * 10 9 7 26 26 C 1.39827 * 119.66733 * 0.25537 * 6 5 4 27 27 F 1.35099 * 120.10977 * 179.72752 * 26 6 5 28 28 C 1.38318 * 119.77694 * 359.47024 * 26 6 5 29 29 C 1.38197 * 120.11721 * 0.52968 * 28 26 6 30 30 H 0.96708 * 113.99835 * 59.99126 * 1 2 3 31 31 H 1.08999 * 109.46856 * 120.00509 * 2 1 3 32 32 H 1.48504 * 109.99970 * 298.68438 * 3 2 1 33 33 H 1.48503 * 109.99927 * 59.99848 * 3 2 1 34 34 H 1.07998 * 120.05867 * 359.97415 * 5 4 2 35 35 H 0.97004 * 119.99983 * 359.97438 * 9 7 6 36 36 H 1.08996 * 109.47853 * 300.00060 * 12 10 9 37 37 H 1.09002 * 109.47153 * 60.00089 * 12 10 9 38 38 H 1.09002 * 109.46716 * 60.00091 * 13 12 10 39 39 H 1.09000 * 109.47486 * 180.02562 * 13 12 10 40 40 H 1.08003 * 119.57459 * 180.29031 * 19 18 17 41 41 H 1.08005 * 120.35235 * 179.70433 * 20 19 18 42 42 H 1.08005 * 120.76528 * 179.97438 * 21 20 19 43 43 H 1.09002 * 109.46695 * 59.99734 * 24 14 13 44 44 H 1.08993 * 109.47194 * 179.97438 * 24 14 13 45 45 H 1.08992 * 109.47399 * 300.00063 * 25 10 9 46 46 H 1.09004 * 109.46724 * 60.00549 * 25 10 9 47 47 H 1.08003 * 119.93893 * 180.27617 * 28 26 6 48 48 H 1.08005 * 119.82922 * 179.72542 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9312 -0.7105 -1.2305 5 6 1.5967 -2.0303 -1.4465 6 6 2.0619 -2.6882 -2.5871 7 6 1.7079 -4.1023 -2.8246 8 8 2.1140 -4.6720 -3.8187 9 7 0.9336 -4.7609 -1.9395 10 6 0.5820 -6.1634 -2.1753 11 1 1.4179 -6.6717 -2.6558 12 6 0.2715 -6.8427 -0.8400 13 6 -0.0964 -8.3072 -1.0862 14 6 -1.3266 -8.3786 -1.9931 15 1 -2.1623 -7.8700 -1.5123 16 8 -1.6698 -9.7466 -2.2235 17 6 -2.9808 -10.0256 -2.4350 18 7 -3.8701 -9.0473 -2.4151 19 6 -5.1538 -9.2738 -2.6214 20 6 -5.6185 -10.5523 -2.8558 21 6 -4.7181 -11.6088 -2.8794 22 6 -3.3772 -11.3382 -2.6647 23 17 -2.2070 -12.6205 -2.6823 24 6 -1.0161 -7.6993 -3.3283 25 6 -0.6481 -6.2352 -3.0822 26 6 2.8693 -2.0032 -3.5003 27 9 3.3288 -2.6326 -4.6039 28 6 3.1917 -0.6775 -3.2726 29 6 2.7264 -0.0352 -2.1409 30 1 -0.3933 0.4419 -0.7650 31 1 1.7922 -0.5139 0.8899 32 1 1.5880 2.4585 -1.2242 33 1 1.5617 2.4678 1.2085 34 1 0.9761 -2.5544 -0.7348 35 1 0.6092 -4.3062 -1.1464 36 1 1.1477 -6.7915 -0.1938 37 1 -0.5645 -6.3344 -0.3594 38 1 0.7393 -8.8158 -1.5669 39 1 -0.3180 -8.7911 -0.1350 40 1 -5.8505 -8.4488 -2.6022 41 1 -6.6714 -10.7290 -3.0189 42 1 -5.0558 -12.6186 -3.0603 43 1 -0.1804 -8.2079 -3.8090 44 1 -1.8924 -7.7505 -3.9745 45 1 -1.4840 -5.7269 -2.6017 46 1 -0.4268 -5.7513 -4.0335 47 1 3.8115 -0.1446 -3.9785 48 1 2.9846 0.9987 -1.9655 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12496662_12335834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:36:10 Heat of formation + Delta-G solvation = -86.665438 kcal Electronic energy + Delta-G solvation = -35447.660511 eV Core-core repulsion = 30409.905933 eV Total energy + Delta-G solvation = -5037.754578 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.113 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -50.02408 -41.93262 -41.46408 -40.33885 -39.64650 -38.08159 -37.62205 -37.54914 -35.15929 -33.42931 -32.86744 -32.30444 -31.99680 -31.44886 -29.58011 -26.63304 -25.75504 -24.96024 -24.49165 -23.91019 -23.46060 -22.49283 -21.65208 -21.06362 -19.66184 -19.26793 -18.38410 -18.37052 -18.19557 -17.60336 -17.37745 -17.01456 -16.92386 -16.83781 -16.33434 -16.14743 -16.00433 -15.96315 -15.74367 -15.60718 -15.22685 -14.84053 -14.76535 -14.56518 -14.43506 -14.38892 -14.28570 -13.98137 -13.57201 -13.41475 -13.37509 -13.24325 -13.13620 -13.00570 -12.86326 -12.75800 -12.30898 -12.29451 -12.24049 -12.10430 -11.73917 -11.58644 -11.37765 -11.19267 -10.80297 -10.74236 -10.63944 -10.42912 -10.15262 -9.83330 -9.49207 -4.87816 -0.50393 -0.12504 -0.03323 0.10724 1.02718 1.31614 1.59797 1.63661 1.74663 1.96468 2.02357 2.46898 2.57427 3.04471 3.19869 3.32575 3.42984 3.50644 3.52438 3.54345 3.62731 3.68555 3.87060 3.89270 3.95623 4.01248 4.02602 4.10241 4.12568 4.21115 4.25472 4.33429 4.37079 4.48320 4.53345 4.62300 4.70513 4.77325 4.78760 4.82662 4.87457 4.93350 4.94935 4.99073 4.99988 5.01611 5.12770 5.14852 5.16450 5.34477 5.37797 5.59374 6.10081 6.34662 6.50501 6.64836 7.03676 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.074 4.074 3 Si 0.759 3.241 4 C -0.131 4.131 5 C -0.023 4.023 6 C -0.189 4.189 7 C 0.555 3.445 8 O -0.571 6.571 9 N -0.704 5.704 10 C 0.145 3.855 11 H 0.070 0.930 12 C -0.110 4.110 13 C -0.110 4.110 14 C 0.092 3.908 15 H 0.095 0.905 16 O -0.304 6.304 17 C 0.316 3.684 18 N -0.541 5.541 19 C 0.137 3.863 20 C -0.190 4.190 21 C -0.035 4.035 22 C -0.133 4.133 23 Cl -0.055 7.055 24 C -0.123 4.123 25 C -0.115 4.115 26 C 0.132 3.868 27 F -0.138 7.138 28 C -0.153 4.153 29 C -0.051 4.051 30 H 0.388 0.612 31 H 0.139 0.861 32 H -0.279 1.279 33 H -0.305 1.305 34 H 0.160 0.840 35 H 0.416 0.584 36 H 0.095 0.905 37 H 0.094 0.906 38 H 0.070 0.930 39 H 0.087 0.913 40 H 0.195 0.805 41 H 0.180 0.820 42 H 0.171 0.829 43 H 0.059 0.941 44 H 0.060 0.940 45 H 0.083 0.917 46 H 0.050 0.950 47 H 0.166 0.834 48 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.512 4.667 5.678 8.146 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.183 4.183 3 Si 0.665 3.335 4 C -0.132 4.132 5 C -0.042 4.042 6 C -0.193 4.193 7 C 0.343 3.657 8 O -0.451 6.451 9 N -0.356 5.356 10 C 0.041 3.959 11 H 0.088 0.912 12 C -0.148 4.148 13 C -0.148 4.148 14 C 0.036 3.964 15 H 0.113 0.887 16 O -0.211 6.211 17 C 0.137 3.863 18 N -0.266 5.266 19 C -0.019 4.019 20 C -0.210 4.210 21 C -0.060 4.060 22 C -0.163 4.163 23 Cl -0.027 7.027 24 C -0.162 4.162 25 C -0.153 4.153 26 C 0.112 3.888 27 F -0.116 7.116 28 C -0.171 4.171 29 C -0.069 4.069 30 H 0.237 0.763 31 H 0.156 0.844 32 H -0.206 1.206 33 H -0.234 1.234 34 H 0.178 0.822 35 H 0.255 0.745 36 H 0.113 0.887 37 H 0.112 0.888 38 H 0.089 0.911 39 H 0.106 0.894 40 H 0.212 0.788 41 H 0.197 0.803 42 H 0.188 0.812 43 H 0.078 0.922 44 H 0.079 0.921 45 H 0.101 0.899 46 H 0.069 0.931 47 H 0.184 0.816 48 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -2.677 5.298 5.661 8.203 hybrid contribution -1.181 -1.122 -1.104 1.968 sum -3.858 4.176 4.557 7.286 Atomic orbital electron populations 1.86596 1.18024 1.80215 1.50358 1.25153 0.83685 1.11315 0.98159 0.94167 0.90347 0.72281 0.76714 1.20409 1.00044 0.94513 0.98202 1.21198 0.95336 0.93994 0.93674 1.20057 1.05539 0.94524 0.99131 1.18349 0.78224 0.86370 0.82799 1.90846 1.55221 1.69482 1.29571 1.45784 1.51297 1.12804 1.25696 1.21033 0.96944 0.80851 0.97108 0.91227 1.21699 1.04004 0.93862 0.95234 1.21546 0.96144 0.97275 0.99868 1.22532 0.98810 0.78839 0.96192 0.88744 1.86353 1.19452 1.30973 1.84366 1.19701 0.85485 0.88780 0.92375 1.67488 1.04851 1.33794 1.20441 1.23202 0.89895 0.98293 0.90462 1.22426 1.02852 0.92109 1.03624 1.21821 0.89020 1.02637 0.92566 1.21173 0.92951 0.88045 1.14129 1.98384 1.58435 1.48674 1.97191 1.21788 1.01517 0.95672 0.97228 1.21730 0.98173 0.95569 0.99858 1.18237 0.95225 0.91892 0.83458 1.91558 1.86471 1.82729 1.50844 1.21378 1.03342 0.91707 1.00690 1.21383 0.93466 1.00760 0.91244 0.76250 0.84385 1.20575 1.23378 0.82235 0.74539 0.88662 0.88792 0.91134 0.89432 0.78788 0.80269 0.81160 0.92219 0.92104 0.89872 0.93136 0.81633 0.81576 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.53 12.76 -148.98 -1.90 0.63 16 2 C -0.07 0.58 2.82 71.24 0.20 0.78 16 3 Si 0.76 -5.70 29.78 68.60 2.04 -3.65 16 4 C -0.13 0.82 5.39 -19.90 -0.11 0.72 16 5 C -0.02 0.10 9.09 22.52 0.20 0.30 16 6 C -0.19 -0.57 5.88 -20.05 -0.12 -0.69 16 7 C 0.55 4.08 7.73 86.74 0.67 4.75 16 8 O -0.57 -9.87 15.00 -3.92 -0.06 -9.93 16 9 N -0.70 0.18 5.03 -445.55 -2.24 -2.06 16 10 C 0.15 0.14 2.45 44.99 0.11 0.25 16 11 H 0.07 0.46 7.58 -2.39 -0.02 0.44 16 12 C -0.11 0.50 5.39 30.59 0.16 0.67 16 13 C -0.11 0.11 5.57 30.60 0.17 0.28 16 14 C 0.09 0.25 2.38 30.60 0.07 0.32 16 15 H 0.09 0.22 6.98 -2.39 -0.02 0.20 16 16 O -0.30 -2.23 9.24 -90.14 -0.83 -3.06 16 17 C 0.32 2.07 7.45 84.82 0.63 2.70 16 18 N -0.54 -2.13 8.64 -308.87 -2.67 -4.80 16 19 C 0.14 -0.29 11.17 84.62 0.95 0.66 16 20 C -0.19 0.84 10.10 22.36 0.23 1.07 16 21 C -0.03 0.03 9.97 22.47 0.22 0.26 16 22 C -0.13 -0.65 6.36 22.51 0.14 -0.50 16 23 Cl -0.06 -0.34 28.54 -2.72 -0.08 -0.42 16 24 C -0.12 -0.53 5.54 30.58 0.17 -0.36 16 25 C -0.11 -0.30 5.49 30.58 0.17 -0.13 16 26 C 0.13 0.68 7.29 22.67 0.17 0.85 16 27 F -0.14 -1.73 15.55 44.97 0.70 -1.03 16 28 C -0.15 0.36 10.01 22.28 0.22 0.58 16 29 C -0.05 0.34 8.66 22.31 0.19 0.53 16 30 H 0.39 -3.69 8.70 -74.05 -0.64 -4.33 16 31 H 0.14 -1.43 7.96 -2.39 -0.02 -1.45 16 32 H -0.28 1.04 7.11 99.48 0.71 1.75 16 33 H -0.31 -0.45 7.11 99.48 0.71 0.26 16 34 H 0.16 -1.44 6.41 -2.91 -0.02 -1.46 16 35 H 0.42 -2.97 6.64 -92.71 -0.62 -3.58 16 36 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 37 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 38 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 39 H 0.09 -0.19 8.14 -2.39 -0.02 -0.20 16 40 H 0.20 -1.69 8.06 -2.91 -0.02 -1.71 16 41 H 0.18 -1.99 8.06 -2.91 -0.02 -2.02 16 42 H 0.17 -0.96 8.06 -2.91 -0.02 -0.98 16 43 H 0.06 0.41 8.14 -2.39 -0.02 0.39 16 44 H 0.06 0.39 8.14 -2.39 -0.02 0.37 16 45 H 0.08 -0.02 8.14 -2.39 -0.02 -0.04 16 46 H 0.05 0.40 8.14 -2.39 -0.02 0.38 16 47 H 0.17 -1.03 8.06 -2.91 -0.02 -1.06 16 48 H 0.17 -1.99 4.86 -2.91 -0.01 -2.00 16 Total: 0.00 -26.93 414.00 -0.76 -27.69 By element: Atomic # 1 Polarization: -16.21 SS G_CDS: -0.18 Total: -16.39 kcal Atomic # 6 Polarization: 8.57 SS G_CDS: 4.46 Total: 13.03 kcal Atomic # 7 Polarization: -1.95 SS G_CDS: -4.91 Total: -6.86 kcal Atomic # 8 Polarization: -9.56 SS G_CDS: -2.79 Total: -12.36 kcal Atomic # 9 Polarization: -1.73 SS G_CDS: 0.70 Total: -1.03 kcal Atomic # 14 Polarization: -5.70 SS G_CDS: 2.04 Total: -3.65 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -0.08 Total: -0.42 kcal Total: -26.93 -0.76 -27.69 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12496662_12335834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.979 kcal (2) G-P(sol) polarization free energy of solvation -26.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.760 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.686 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.665 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds