Wall clock time and date at job start Sun Mar 7 2021 03:36:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86296 * 109.46894 * 2 1 4 4 C 1.50711 * 109.46783 * 240.00379 * 2 1 3 5 5 C 1.37938 * 119.91962 * 299.99942 * 4 2 1 6 6 C 1.39600 * 119.86981 * 180.02562 * 5 4 2 7 7 C 1.47846 * 120.13808 * 179.97438 * 6 5 4 8 8 O 1.21557 * 120.00068 * 359.97438 * 7 6 5 9 9 N 1.34777 * 119.99970 * 179.97438 * 7 6 5 10 10 C 1.46504 * 119.99637 * 180.02562 * 9 7 6 11 11 H 1.08993 * 109.47378 * 324.99749 * 10 9 7 12 12 C 1.52999 * 109.47050 * 85.00741 * 10 9 7 13 13 C 1.52997 * 109.46991 * 179.97438 * 12 10 9 14 14 C 1.52996 * 109.47131 * 299.99311 * 13 12 10 15 15 H 1.08996 * 109.47452 * 300.00000 * 14 13 12 16 16 O 1.42911 * 109.47245 * 180.02562 * 14 13 12 17 17 C 1.35690 * 116.99542 * 90.00042 * 16 14 13 18 18 N 1.32219 * 119.69772 * 359.73339 * 17 16 14 19 19 C 1.31985 * 121.66235 * 179.71278 * 18 17 16 20 20 C 1.38032 * 120.85409 * 0.55712 * 19 18 17 21 21 C 1.38828 * 119.30297 * 359.73127 * 20 19 18 22 22 C 1.38461 * 118.47436 * 359.97438 * 21 20 19 23 23 Cl 1.73596 * 120.45364 * 179.97438 * 22 21 20 24 24 C 1.53002 * 109.46972 * 60.00459 * 14 13 12 25 25 C 1.52997 * 109.46817 * 299.99733 * 24 14 13 26 26 C 1.39541 * 119.72333 * 0.24423 * 6 5 4 27 27 C 1.38075 * 119.83709 * 359.45482 * 26 6 5 28 28 Br 1.89105 * 119.93545 * 180.29762 * 27 26 6 29 29 C 1.38358 * 119.91800 * 119.97743 * 4 2 1 30 30 H 0.96697 * 114.00439 * 60.00225 * 1 2 3 31 31 H 1.08994 * 109.47670 * 120.00148 * 2 1 3 32 32 H 1.48500 * 110.00430 * 298.68181 * 3 2 1 33 33 H 1.48493 * 110.00301 * 60.00544 * 3 2 1 34 34 H 1.08003 * 120.06679 * 359.97438 * 5 4 2 35 35 H 0.96998 * 120.00328 * 0.02562 * 9 7 6 36 36 H 1.09002 * 109.46719 * 299.99449 * 12 10 9 37 37 H 1.08993 * 109.47839 * 59.99291 * 12 10 9 38 38 H 1.09001 * 109.47289 * 179.97438 * 13 12 10 39 39 H 1.09000 * 109.47611 * 59.99933 * 13 12 10 40 40 H 1.07994 * 119.56758 * 180.28424 * 19 18 17 41 41 H 1.08002 * 120.34624 * 179.74611 * 20 19 18 42 42 H 1.08006 * 120.76159 * 180.02562 * 21 20 19 43 43 H 1.09002 * 109.47070 * 179.97438 * 24 14 13 44 44 H 1.08996 * 109.47407 * 59.99513 * 24 14 13 45 45 H 1.09001 * 109.47502 * 300.00518 * 25 24 14 46 46 H 1.09001 * 109.47289 * 180.02562 * 25 24 14 47 47 H 1.08002 * 120.08183 * 179.75268 * 26 6 5 48 48 H 1.07999 * 119.86348 * 359.97438 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.5970 -2.0310 -1.4473 6 6 2.0632 -2.6882 -2.5873 7 6 1.7090 -4.1037 -2.8252 8 8 1.0108 -4.6979 -2.0270 9 7 2.1603 -4.7353 -3.9270 10 6 1.8088 -6.1378 -4.1629 11 1 1.7609 -6.6656 -3.2105 12 6 0.4472 -6.2126 -4.8566 13 6 0.0804 -7.6773 -5.1035 14 6 1.1424 -8.3259 -5.9936 15 1 1.1903 -7.7978 -6.9460 16 8 0.7996 -9.6939 -6.2248 17 6 0.0256 -9.9604 -7.3070 18 7 -0.3769 -8.9697 -8.0845 19 6 -1.1259 -9.1853 -9.1497 20 6 -1.5279 -10.4623 -9.4857 21 6 -1.1315 -11.5303 -8.6922 22 6 -0.3411 -11.2724 -7.5850 23 17 0.1833 -12.5692 -6.5570 24 6 2.5041 -8.2512 -5.3000 25 6 2.8709 -6.7865 -5.0530 26 6 2.8697 -2.0051 -3.4985 27 6 3.1919 -0.6815 -3.2731 28 35 4.2776 0.2493 -4.5104 29 6 2.7262 -0.0362 -2.1405 30 1 -0.3934 0.4416 -0.7650 31 1 1.7924 -0.5138 0.8899 32 1 1.5878 2.4586 -1.2242 33 1 1.5615 2.4678 1.2085 34 1 0.9764 -2.5558 -0.7360 35 1 2.7178 -4.2613 -4.5637 36 1 -0.3094 -5.7502 -4.2227 37 1 0.4951 -5.6849 -5.8090 38 1 -0.8898 -7.7307 -5.5974 39 1 0.0325 -8.2055 -4.1513 40 1 -1.4317 -8.3513 -9.7638 41 1 -2.1441 -10.6289 -10.3569 42 1 -1.4322 -12.5392 -8.9334 43 1 3.2607 -8.7136 -5.9339 44 1 2.4563 -8.7792 -4.3477 45 1 2.9187 -6.2583 -6.0053 46 1 3.8412 -6.7331 -4.5593 47 1 3.2369 -2.5090 -4.3803 48 1 2.9843 0.9979 -1.9664 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12496662_12335870.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:36:53 Heat of formation + Delta-G solvation = -41.353064 kcal Electronic energy + Delta-G solvation = -34664.078566 eV Core-core repulsion = 29757.924853 eV Total energy + Delta-G solvation = -4906.153713 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 467.033 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -41.93313 -41.60552 -40.47073 -39.60647 -38.05817 -37.78079 -37.53134 -35.10745 -33.66631 -33.45108 -33.17400 -31.99387 -31.52028 -30.52023 -29.66271 -27.10083 -25.75994 -24.85522 -24.45611 -23.88442 -22.90304 -22.82047 -21.51728 -21.02407 -19.62980 -19.20393 -18.29586 -18.07748 -17.66408 -17.43688 -17.41191 -16.85672 -16.69048 -16.44287 -16.17676 -16.03937 -15.85872 -15.68785 -15.27151 -15.06752 -14.93650 -14.79680 -14.52457 -14.31966 -14.23485 -14.13761 -13.99448 -13.46511 -13.38685 -13.31842 -13.13236 -13.04597 -12.96942 -12.74489 -12.32905 -12.28904 -12.21097 -12.06196 -12.00125 -11.85712 -11.57212 -11.51140 -11.33033 -11.09736 -10.79231 -10.76818 -10.73271 -10.38033 -10.14296 -9.95873 -9.47322 -5.08385 -0.54254 -0.21923 -0.14562 0.07828 0.36111 1.09169 1.11391 1.47424 1.56048 1.75251 1.85645 1.99360 2.46943 2.54761 3.14963 3.15890 3.25000 3.33951 3.49901 3.52863 3.64826 3.70576 3.77824 3.80399 3.87687 3.90515 3.93214 4.02244 4.08557 4.17172 4.17606 4.21471 4.25600 4.30446 4.33316 4.46577 4.54446 4.65872 4.68558 4.69419 4.83073 4.88154 4.89073 4.91359 4.98765 5.02455 5.06689 5.13413 5.16691 5.27612 5.32590 5.40080 6.13088 6.26874 6.32190 6.63320 7.06439 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.679 3.321 4 C -0.118 4.118 5 C -0.017 4.017 6 C -0.128 4.128 7 C 0.562 3.438 8 O -0.525 6.525 9 N -0.722 5.722 10 C 0.143 3.857 11 H 0.095 0.905 12 C -0.124 4.124 13 C -0.131 4.131 14 C 0.089 3.911 15 H 0.093 0.907 16 O -0.288 6.288 17 C 0.338 3.662 18 N -0.526 5.526 19 C 0.144 3.856 20 C -0.201 4.201 21 C -0.032 4.032 22 C -0.114 4.114 23 Cl -0.041 7.041 24 C -0.113 4.113 25 C -0.122 4.122 26 C -0.053 4.053 27 C -0.094 4.094 28 Br -0.033 7.033 29 C -0.064 4.064 30 H 0.377 0.623 31 H 0.126 0.874 32 H -0.255 1.255 33 H -0.250 1.250 34 H 0.149 0.851 35 H 0.400 0.600 36 H 0.075 0.925 37 H 0.069 0.931 38 H 0.072 0.928 39 H 0.074 0.926 40 H 0.167 0.833 41 H 0.148 0.852 42 H 0.152 0.848 43 H 0.079 0.921 44 H 0.079 0.921 45 H 0.074 0.926 46 H 0.081 0.919 47 H 0.139 0.861 48 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.604 1.642 -4.839 5.735 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.184 4.184 3 Si 0.580 3.420 4 C -0.119 4.119 5 C -0.037 4.037 6 C -0.132 4.132 7 C 0.349 3.651 8 O -0.401 6.401 9 N -0.373 5.373 10 C 0.039 3.961 11 H 0.113 0.887 12 C -0.162 4.162 13 C -0.169 4.169 14 C 0.033 3.967 15 H 0.111 0.889 16 O -0.194 6.194 17 C 0.158 3.842 18 N -0.250 5.250 19 C -0.011 4.011 20 C -0.221 4.221 21 C -0.058 4.058 22 C -0.143 4.143 23 Cl -0.012 7.012 24 C -0.151 4.151 25 C -0.160 4.160 26 C -0.074 4.074 27 C -0.174 4.174 28 Br 0.053 6.947 29 C -0.083 4.083 30 H 0.225 0.775 31 H 0.144 0.856 32 H -0.180 1.180 33 H -0.175 1.175 34 H 0.166 0.834 35 H 0.235 0.765 36 H 0.094 0.906 37 H 0.088 0.912 38 H 0.091 0.909 39 H 0.093 0.907 40 H 0.184 0.816 41 H 0.166 0.834 42 H 0.170 0.830 43 H 0.098 0.902 44 H 0.098 0.902 45 H 0.092 0.908 46 H 0.100 0.900 47 H 0.156 0.844 48 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 2.818 2.645 -3.648 5.314 hybrid contribution -1.298 -0.928 -0.941 1.852 sum 1.520 1.717 -4.589 5.130 Atomic orbital electron populations 1.86644 1.17175 1.79885 1.49349 1.25058 0.84343 1.11058 0.97895 0.95091 0.91627 0.74282 0.81037 1.20322 0.99286 0.94823 0.97471 1.21303 0.94420 0.92894 0.95050 1.19974 1.01725 0.94339 0.97141 1.18100 0.79827 0.85895 0.81289 1.90832 1.37039 1.66910 1.45321 1.45964 1.53719 1.13236 1.24421 1.21116 0.94155 0.80800 1.00073 0.88675 1.21846 0.97061 0.96173 1.01162 1.21895 0.98955 0.95459 1.00612 1.22497 0.94636 0.79540 1.00017 0.88908 1.86375 1.62901 1.30078 1.40067 1.19504 0.89476 0.88165 0.87091 1.67468 1.16379 1.33534 1.07662 1.22598 0.90508 0.96956 0.91057 1.22048 1.04535 0.92880 1.02633 1.21473 0.92388 1.01182 0.90736 1.20945 1.06621 0.88324 0.98443 1.98400 1.89357 1.47059 1.66426 1.21541 0.95133 0.96349 1.02107 1.21757 0.98813 0.95168 1.00254 1.21288 0.95141 0.92526 0.98446 1.21644 1.03002 0.95585 0.97158 1.96848 1.65755 1.75409 1.56680 1.21217 0.95196 0.99979 0.91930 0.77474 0.85631 1.17993 1.17476 0.83370 0.76451 0.90644 0.91224 0.90891 0.90730 0.81551 0.83445 0.83040 0.90198 0.90197 0.90756 0.89989 0.84366 0.84052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.31 12.76 -35.23 -0.45 -0.76 16 2 C -0.07 0.08 2.82 36.01 0.10 0.18 16 3 Si 0.68 -1.18 29.78 -169.99 -5.06 -6.24 16 4 C -0.12 0.09 5.38 -104.68 -0.56 -0.48 16 5 C -0.02 -0.01 9.15 -39.18 -0.36 -0.37 16 6 C -0.13 -0.03 5.87 -104.97 -0.62 -0.64 16 7 C 0.56 0.88 7.74 -12.33 -0.10 0.78 16 8 O -0.52 -2.81 16.01 5.32 0.09 -2.72 16 9 N -0.72 0.89 5.03 -54.75 -0.28 0.61 16 10 C 0.14 -0.12 2.46 -67.93 -0.17 -0.29 16 11 H 0.10 0.10 7.58 -51.93 -0.39 -0.29 16 12 C -0.12 0.03 5.49 -26.73 -0.15 -0.12 16 13 C -0.13 -0.06 5.54 -26.73 -0.15 -0.21 16 14 C 0.09 0.03 2.38 -26.73 -0.06 -0.04 16 15 H 0.09 0.05 6.99 -51.93 -0.36 -0.32 16 16 O -0.29 -0.70 9.24 -18.77 -0.17 -0.87 16 17 C 0.34 0.81 7.45 -17.09 -0.13 0.69 16 18 N -0.53 -0.81 8.65 -13.30 -0.12 -0.92 16 19 C 0.14 -0.12 11.17 -17.56 -0.20 -0.31 16 20 C -0.20 0.33 10.10 -39.44 -0.40 -0.07 16 21 C -0.03 0.01 9.97 -39.28 -0.39 -0.38 16 22 C -0.11 -0.20 6.36 -39.20 -0.25 -0.45 16 23 Cl -0.04 -0.09 28.54 -51.86 -1.48 -1.57 16 24 C -0.11 0.14 5.57 -26.73 -0.15 -0.01 16 25 C -0.12 0.32 5.39 -26.73 -0.14 0.18 16 26 C -0.05 0.08 9.28 -39.16 -0.36 -0.29 16 27 C -0.09 0.09 6.22 -39.57 -0.25 -0.15 16 28 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 29 C -0.06 0.08 8.41 -39.47 -0.33 -0.25 16 30 H 0.38 -0.86 8.70 45.56 0.40 -0.47 16 31 H 0.13 -0.23 7.96 -51.93 -0.41 -0.64 16 32 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 33 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 34 H 0.15 0.25 7.65 -52.48 -0.40 -0.16 16 35 H 0.40 -1.52 6.64 -40.82 -0.27 -1.79 16 36 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 37 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 39 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 40 H 0.17 -0.60 8.06 -52.49 -0.42 -1.03 16 41 H 0.15 -0.63 8.06 -52.49 -0.42 -1.05 16 42 H 0.15 -0.39 8.06 -52.48 -0.42 -0.81 16 43 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 44 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 46 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 47 H 0.14 -0.52 6.41 -52.49 -0.34 -0.86 16 48 H 0.14 -0.37 4.86 -52.49 -0.26 -0.62 16 LS Contribution 430.76 15.07 6.49 6.49 Total: 0.00 -8.11 430.76 -13.81 -21.92 By element: Atomic # 1 Polarization: -5.58 SS G_CDS: -5.89 Total: -11.46 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -4.66 Total: -2.22 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: -0.39 Total: -0.31 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.54 Total: -4.35 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.06 Total: -6.24 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.48 Total: -1.57 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 6.49 Total: 6.49 kcal Total: -8.11 -13.81 -21.92 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12496662_12335870.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.431 kcal (2) G-P(sol) polarization free energy of solvation -8.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.542 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.811 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.353 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds