Wall clock time and date at job start Sat Mar 6 2021 17:09:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.46919 * 2 1 4 4 C 1.50703 * 109.47142 * 119.99735 * 2 1 3 5 5 C 1.38641 * 119.93656 * 194.99954 * 4 2 1 6 6 F 1.35095 * 119.88165 * 0.02662 * 5 4 2 7 7 C 1.38678 * 120.23429 * 179.97438 * 5 4 2 8 8 C 1.37815 * 120.11925 * 0.02562 * 7 5 4 9 9 C 1.39669 * 119.88186 * 0.02562 * 8 7 5 10 10 C 1.47726 * 120.11817 * 179.97438 * 9 8 7 11 11 O 1.21568 * 120.00023 * 180.02562 * 10 9 8 12 12 N 1.34773 * 120.00001 * 0.02562 * 10 9 8 13 13 C 1.46497 * 119.99840 * 179.97438 * 12 10 9 14 14 H 1.08997 * 109.47554 * 35.00533 * 13 12 10 15 15 C 1.53008 * 109.46951 * 155.00127 * 13 12 10 16 16 C 1.53007 * 109.47166 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.46798 * 300.00079 * 16 15 13 18 18 H 1.08999 * 109.47633 * 299.99996 * 17 16 15 19 19 O 1.42903 * 109.46861 * 179.97438 * 17 16 15 20 20 C 1.35699 * 116.99791 * 149.99612 * 19 17 16 21 21 N 1.32224 * 119.69598 * 0.02562 * 20 19 17 22 22 C 1.31974 * 121.66105 * 179.72250 * 21 20 19 23 23 C 1.38032 * 120.86353 * 0.02562 * 22 21 20 24 24 C 1.38835 * 119.29556 * 359.97438 * 23 22 21 25 25 C 1.38456 * 118.47783 * 359.97438 * 24 23 22 26 26 Cl 1.73596 * 120.45847 * 180.02562 * 25 24 23 27 27 C 1.53005 * 109.47654 * 60.00176 * 17 16 15 28 28 C 1.53000 * 109.47501 * 275.00240 * 13 12 10 29 29 C 1.37858 * 119.94350 * 15.32704 * 4 2 1 30 30 H 0.96701 * 113.99844 * 299.99955 * 1 2 3 31 31 H 1.09000 * 109.47182 * 240.00382 * 2 1 3 32 32 H 1.48504 * 109.99761 * 300.00263 * 3 2 1 33 33 H 1.48501 * 110.00332 * 61.31691 * 3 2 1 34 34 H 1.07991 * 119.93917 * 180.02562 * 7 5 4 35 35 H 1.08008 * 120.05828 * 180.02562 * 8 7 5 36 36 H 0.97001 * 120.00139 * 359.97438 * 12 10 9 37 37 H 1.08999 * 109.46783 * 60.00391 * 15 13 12 38 38 H 1.08990 * 109.46901 * 300.00100 * 15 13 12 39 39 H 1.08996 * 109.46872 * 180.02562 * 16 15 13 40 40 H 1.08995 * 109.46788 * 59.99734 * 16 15 13 41 41 H 1.08000 * 119.56516 * 180.02562 * 22 21 20 42 42 H 1.07994 * 120.35084 * 180.02562 * 23 22 21 43 43 H 1.07997 * 120.75697 * 180.02562 * 24 23 22 44 44 H 1.08999 * 109.46747 * 59.99278 * 27 17 16 45 45 H 1.08990 * 109.47228 * 179.97438 * 27 17 16 46 46 H 1.09003 * 109.46977 * 299.99959 * 28 13 12 47 47 H 1.08997 * 109.47474 * 59.99782 * 28 13 12 48 48 H 1.07999 * 120.05768 * 359.97438 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.2561 -0.5738 1.6159 6 9 4.0931 0.1965 0.8871 7 6 3.7248 -1.2243 2.7474 8 6 2.8750 -2.0109 3.4948 9 6 1.5398 -2.1527 3.1104 10 6 0.6245 -2.9951 3.9073 11 8 -0.5372 -3.1174 3.5706 12 7 1.0774 -3.6279 5.0077 13 6 0.1696 -4.4627 5.7983 14 1 -0.5391 -4.9582 5.1348 15 6 0.9777 -5.5159 6.5592 16 6 0.0296 -6.3883 7.3844 17 6 -0.7323 -5.5121 8.3808 18 1 -0.0240 -5.0166 9.0447 19 8 -1.6183 -6.3267 9.1511 20 6 -1.8877 -5.9177 10.4166 21 7 -1.3351 -4.8086 10.8781 22 6 -1.5743 -4.3722 12.1004 23 6 -2.4165 -5.0643 12.9473 24 6 -3.0171 -6.2339 12.5014 25 6 -2.7472 -6.6653 11.2138 26 17 -3.4710 -8.1203 10.6033 27 6 -1.5405 -4.4589 7.6200 28 6 -0.5919 -3.5862 6.7947 29 6 1.0745 -1.5002 1.9671 30 1 -0.3933 0.4417 0.7651 31 1 1.7923 -0.5138 -0.8900 32 1 1.5613 2.4679 -1.2085 33 1 1.5878 2.4587 1.2242 34 1 4.7575 -1.1142 3.0435 35 1 3.2410 -2.5167 4.3761 36 1 2.0044 -3.5305 5.2762 37 1 1.6863 -5.0204 7.2229 38 1 1.5201 -6.1402 5.8494 39 1 0.6053 -7.1382 7.9268 40 1 -0.6788 -6.8836 6.7205 41 1 -1.1050 -3.4616 12.4425 42 1 -2.6067 -4.6994 13.9458 43 1 -3.6804 -6.7938 13.1440 44 1 -2.2488 -4.9544 6.9560 45 1 -2.0836 -3.8351 8.3297 46 1 0.1168 -3.0908 7.4584 47 1 -1.1676 -2.8360 6.2528 48 1 0.0440 -1.6098 1.6632 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12496662_12496548.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:09:17 Heat of formation + Delta-G solvation = -87.285304 kcal Electronic energy + Delta-G solvation = -35098.405703 eV Core-core repulsion = 30060.624246 eV Total energy + Delta-G solvation = -5037.781457 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.113 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -50.27548 -41.92257 -41.50690 -40.26158 -39.54098 -38.07731 -37.77475 -37.61343 -35.12265 -33.41926 -32.86927 -32.09497 -31.94545 -31.41299 -29.59434 -27.13074 -25.54320 -24.73723 -24.42778 -23.84485 -23.25074 -22.83426 -21.54800 -21.04977 -19.65209 -19.32683 -18.59339 -18.30487 -18.04968 -17.83584 -17.37192 -17.07084 -17.01449 -16.87193 -16.33467 -16.14060 -15.99853 -15.89392 -15.71723 -15.26258 -15.14538 -15.09549 -14.79151 -14.45007 -14.39472 -14.24847 -14.22864 -13.96927 -13.90037 -13.42044 -13.38894 -13.34133 -13.12862 -12.98948 -12.86337 -12.75667 -12.48143 -12.27934 -12.22206 -12.08474 -11.97270 -11.55918 -11.35281 -11.22287 -11.00437 -10.78978 -10.73344 -10.26581 -10.03191 -9.74248 -9.48079 -4.85866 -0.49640 -0.11510 0.02171 0.11618 1.03642 1.15630 1.49164 1.60595 1.77204 1.85599 2.02563 2.58446 2.58598 2.95538 3.14803 3.21410 3.32106 3.50387 3.56430 3.59981 3.67570 3.70452 3.88834 3.91345 3.98417 4.01465 4.05053 4.11422 4.14469 4.23845 4.28266 4.36418 4.38568 4.41132 4.55939 4.59800 4.74019 4.79823 4.80406 4.88018 4.90395 4.96550 5.00691 5.01863 5.02164 5.04893 5.09237 5.18359 5.19861 5.36994 5.40626 5.62799 6.11756 6.30921 6.43092 6.65746 7.10181 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.080 4.080 3 Si 0.746 3.254 4 C -0.164 4.164 5 C 0.119 3.881 6 F -0.100 7.100 7 C -0.141 4.141 8 C -0.045 4.045 9 C -0.154 4.154 10 C 0.559 3.441 11 O -0.579 6.579 12 N -0.703 5.703 13 C 0.145 3.855 14 H 0.068 0.932 15 C -0.110 4.110 16 C -0.111 4.111 17 C 0.092 3.908 18 H 0.096 0.904 19 O -0.305 6.305 20 C 0.316 3.684 21 N -0.540 5.540 22 C 0.137 3.863 23 C -0.191 4.191 24 C -0.035 4.035 25 C -0.134 4.134 26 Cl -0.056 7.056 27 C -0.125 4.125 28 C -0.115 4.115 29 C -0.040 4.040 30 H 0.387 0.613 31 H 0.133 0.867 32 H -0.290 1.290 33 H -0.285 1.285 34 H 0.182 0.818 35 H 0.177 0.823 36 H 0.418 0.582 37 H 0.096 0.904 38 H 0.094 0.906 39 H 0.086 0.914 40 H 0.068 0.932 41 H 0.196 0.804 42 H 0.179 0.821 43 H 0.170 0.830 44 H 0.058 0.942 45 H 0.059 0.941 46 H 0.085 0.915 47 H 0.051 0.949 48 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.643 0.900 7.544 11.508 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.189 4.189 3 Si 0.650 3.350 4 C -0.165 4.165 5 C 0.099 3.901 6 F -0.079 7.079 7 C -0.159 4.159 8 C -0.064 4.064 9 C -0.157 4.157 10 C 0.347 3.653 11 O -0.459 6.459 12 N -0.356 5.356 13 C 0.040 3.960 14 H 0.086 0.914 15 C -0.148 4.148 16 C -0.149 4.149 17 C 0.036 3.964 18 H 0.114 0.886 19 O -0.212 6.212 20 C 0.137 3.863 21 N -0.265 5.265 22 C -0.018 4.018 23 C -0.211 4.211 24 C -0.061 4.061 25 C -0.163 4.163 26 Cl -0.028 7.028 27 C -0.163 4.163 28 C -0.153 4.153 29 C -0.059 4.059 30 H 0.236 0.764 31 H 0.151 0.849 32 H -0.218 1.218 33 H -0.211 1.211 34 H 0.199 0.801 35 H 0.194 0.806 36 H 0.257 0.743 37 H 0.115 0.885 38 H 0.113 0.887 39 H 0.105 0.895 40 H 0.087 0.913 41 H 0.213 0.787 42 H 0.197 0.803 43 H 0.188 0.812 44 H 0.076 0.924 45 H 0.078 0.922 46 H 0.104 0.896 47 H 0.070 0.930 48 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 8.151 1.435 5.972 10.206 hybrid contribution -1.869 -0.458 0.585 2.011 sum 6.282 0.977 6.557 9.133 Atomic orbital electron populations 1.86572 1.18025 1.80464 1.50293 1.25082 0.83924 1.11575 0.98309 0.94129 0.91519 0.71876 0.77499 1.20307 0.93672 1.02454 1.00116 1.17813 0.86751 0.93379 0.92141 1.91195 1.69443 1.71166 1.76057 1.21473 1.03259 0.97710 0.93483 1.21550 0.90184 0.95272 0.99365 1.19962 0.95443 1.02436 0.97877 1.18429 0.86885 0.79295 0.80690 1.90806 1.19901 1.64175 1.71049 1.45774 1.15049 1.48761 1.25968 1.21017 0.92017 0.90953 0.92003 0.91365 1.21704 0.97558 0.96426 0.99108 1.21554 0.98341 0.98090 0.96952 1.22551 0.90825 0.91217 0.91825 0.88643 1.86357 1.63831 1.50388 1.20655 1.19702 0.90976 0.89629 0.85995 1.67487 1.26826 1.13300 1.18853 1.23204 0.92992 0.99083 0.86514 1.22424 0.99462 0.95528 1.03647 1.21814 0.96606 0.95819 0.91855 1.21177 1.04285 0.94237 0.96649 1.98384 1.81814 1.34621 1.87934 1.21814 0.98487 0.97240 0.98767 1.21754 0.98469 0.97736 0.97365 1.20866 1.00356 0.92390 0.92302 0.76396 0.84909 1.21771 1.21095 0.80093 0.80622 0.74293 0.88506 0.88701 0.89539 0.91312 0.78719 0.80314 0.81246 0.92359 0.92183 0.89644 0.93000 0.85001 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.83 11.64 -148.98 -1.73 -4.56 16 2 C -0.08 -0.14 2.96 71.24 0.21 0.07 16 3 Si 0.75 1.00 29.57 68.60 2.03 3.03 16 4 C -0.16 -0.13 5.13 -19.86 -0.10 -0.23 16 5 C 0.12 -0.35 6.67 22.47 0.15 -0.20 16 6 F -0.10 0.40 13.70 44.97 0.62 1.01 16 7 C -0.14 1.09 10.01 22.27 0.22 1.31 16 8 C -0.05 0.35 9.54 22.52 0.21 0.56 16 9 C -0.15 -0.01 5.87 -20.09 -0.12 -0.13 16 10 C 0.56 2.10 7.73 86.75 0.67 2.77 16 11 O -0.58 -7.88 16.01 -3.93 -0.06 -7.94 16 12 N -0.70 2.61 5.03 -445.52 -2.24 0.37 16 13 C 0.14 -0.23 2.45 44.99 0.11 -0.12 16 14 H 0.07 0.30 7.58 -2.39 -0.02 0.28 16 15 C -0.11 0.75 5.39 30.60 0.16 0.91 16 16 C -0.11 0.27 5.57 30.60 0.17 0.44 16 17 C 0.09 0.12 2.38 30.60 0.07 0.19 16 18 H 0.10 0.06 6.98 -2.39 -0.02 0.04 16 19 O -0.31 -1.92 9.24 -90.19 -0.83 -2.75 16 20 C 0.32 1.77 7.45 84.83 0.63 2.40 16 21 N -0.54 -1.52 8.65 -308.86 -2.67 -4.19 16 22 C 0.14 -0.42 11.17 84.62 0.95 0.52 16 23 C -0.19 0.98 10.10 22.36 0.23 1.21 16 24 C -0.04 0.06 9.97 22.46 0.22 0.28 16 25 C -0.13 -0.55 6.36 22.51 0.14 -0.41 16 26 Cl -0.06 -0.32 28.54 -2.72 -0.08 -0.39 16 27 C -0.12 -0.33 5.54 30.61 0.17 -0.16 16 28 C -0.11 -0.03 5.50 30.61 0.17 0.14 16 29 C -0.04 -0.13 8.78 22.51 0.20 0.07 16 30 H 0.39 0.02 8.44 -74.06 -0.63 -0.61 16 31 H 0.13 0.00 7.96 -2.39 -0.02 -0.02 16 32 H -0.29 -2.32 7.11 99.48 0.71 -1.62 16 33 H -0.28 -1.68 7.11 99.48 0.71 -0.98 16 34 H 0.18 -2.51 8.06 -2.91 -0.02 -2.54 16 35 H 0.18 -2.79 6.40 -2.91 -0.02 -2.81 16 36 H 0.42 -4.81 6.63 -92.71 -0.61 -5.43 16 37 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 38 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 39 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 40 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 41 H 0.20 -1.90 8.06 -2.91 -0.02 -1.93 16 42 H 0.18 -2.10 8.06 -2.91 -0.02 -2.13 16 43 H 0.17 -1.03 8.06 -2.91 -0.02 -1.06 16 44 H 0.06 0.32 8.14 -2.39 -0.02 0.30 16 45 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 46 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 47 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 48 H 0.13 0.93 6.67 -2.91 -0.02 0.91 16 Total: 0.00 -24.66 413.21 -0.67 -25.32 By element: Atomic # 1 Polarization: -19.36 SS G_CDS: -0.17 Total: -19.52 kcal Atomic # 6 Polarization: 5.15 SS G_CDS: 4.48 Total: 9.63 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -4.91 Total: -3.83 kcal Atomic # 8 Polarization: -12.62 SS G_CDS: -2.63 Total: -15.25 kcal Atomic # 9 Polarization: 0.40 SS G_CDS: 0.62 Total: 1.01 kcal Atomic # 14 Polarization: 1.00 SS G_CDS: 2.03 Total: 3.03 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -0.08 Total: -0.39 kcal Total: -24.66 -0.67 -25.32 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12496662_12496548.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.965 kcal (2) G-P(sol) polarization free energy of solvation -24.656 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.321 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.285 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds