Wall clock time and date at job start Sat Mar 6 2021 17:11:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86303 * 109.47320 * 2 1 4 4 C 1.50701 * 109.47045 * 119.99867 * 2 1 3 5 5 C 1.38265 * 119.94825 * 64.99857 * 4 2 1 6 6 C 1.38141 * 120.06229 * 180.02562 * 5 4 2 7 7 C 1.38737 * 119.93972 * 359.97438 * 6 5 4 8 8 O 1.35897 * 120.05333 * 180.02562 * 7 6 5 9 9 C 1.42905 * 117.00093 * 180.02562 * 8 7 6 10 10 C 1.50703 * 109.47264 * 179.97438 * 9 8 7 11 11 O 1.21279 * 119.99926 * 0.02562 * 10 9 8 12 12 N 1.34775 * 119.99773 * 179.97438 * 10 9 8 13 13 C 1.46496 * 119.99642 * 180.02562 * 12 10 9 14 14 H 1.08995 * 109.47458 * 324.99724 * 13 12 10 15 15 C 1.52995 * 109.47348 * 85.00353 * 13 12 10 16 16 C 1.52997 * 109.47456 * 179.97438 * 15 13 12 17 17 C 1.53004 * 109.47280 * 299.99914 * 16 15 13 18 18 H 1.09004 * 109.46996 * 300.00361 * 17 16 15 19 19 O 1.42895 * 109.47159 * 180.02562 * 17 16 15 20 20 C 1.35690 * 117.00093 * 90.00245 * 19 17 16 21 21 N 1.32218 * 119.69581 * 359.72583 * 20 19 17 22 22 C 1.31978 * 121.66447 * 179.71615 * 21 20 19 23 23 C 1.38036 * 120.85748 * 0.55902 * 22 21 20 24 24 C 1.38828 * 119.29837 * 359.72463 * 23 22 21 25 25 C 1.38458 * 118.47514 * 0.02562 * 24 23 22 26 26 Cl 1.73599 * 120.45441 * 180.02562 * 25 24 23 27 27 C 1.53003 * 109.46771 * 59.99432 * 17 16 15 28 28 C 1.52997 * 109.47682 * 300.00321 * 27 17 16 29 29 C 1.38737 * 119.89063 * 0.27773 * 7 6 5 30 30 C 1.38149 * 119.94020 * 359.46855 * 29 7 6 31 31 H 0.96706 * 113.99797 * 300.00544 * 1 2 3 32 32 H 1.08999 * 109.47526 * 239.99495 * 2 1 3 33 33 H 1.48503 * 109.99786 * 178.68074 * 3 2 1 34 34 H 1.48496 * 109.99593 * 299.99834 * 3 2 1 35 35 H 1.08005 * 119.96603 * 0.02562 * 5 4 2 36 36 H 1.07997 * 120.03246 * 179.97438 * 6 5 4 37 37 H 1.09001 * 109.47103 * 300.00408 * 9 8 7 38 38 H 1.09004 * 109.47054 * 59.99912 * 9 8 7 39 39 H 0.96998 * 120.00166 * 0.02562 * 12 10 9 40 40 H 1.09001 * 109.46839 * 300.00060 * 15 13 12 41 41 H 1.09002 * 109.47259 * 59.99729 * 15 13 12 42 42 H 1.08995 * 109.47432 * 179.97438 * 16 15 13 43 43 H 1.09002 * 109.46984 * 59.99712 * 16 15 13 44 44 H 1.08007 * 119.57298 * 180.28769 * 22 21 20 45 45 H 1.07999 * 120.34893 * 179.70505 * 23 22 21 46 46 H 1.07998 * 120.76004 * 179.97438 * 24 23 22 47 47 H 1.09001 * 109.46804 * 179.97438 * 27 17 16 48 48 H 1.09004 * 109.46602 * 60.00687 * 27 17 16 49 49 H 1.09002 * 109.46984 * 300.00193 * 28 27 17 50 50 H 1.09002 * 109.47050 * 180.02562 * 28 27 17 51 51 H 1.08000 * 120.02659 * 179.72232 * 29 7 6 52 52 H 1.07994 * 119.96900 * 180.27568 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6840 -2.0605 1.3974 6 6 2.1429 -2.7139 2.5247 7 6 2.8530 -2.0143 3.4896 8 8 3.3059 -2.6549 4.5992 9 6 4.0291 -1.8716 5.5509 10 6 4.4479 -2.7446 6.7056 11 8 4.1563 -3.9218 6.7128 12 7 5.1474 -2.2174 7.7299 13 6 5.5550 -3.0662 8.8522 14 1 4.7832 -3.8118 9.0429 15 6 6.8697 -3.7693 8.5086 16 6 7.2958 -4.6553 9.6809 17 6 7.4904 -3.7915 10.9287 18 1 8.2620 -3.0457 10.7376 19 8 7.8889 -4.6189 12.0235 20 6 9.2209 -4.8089 12.1991 21 7 10.0787 -4.2405 11.3689 22 6 11.3821 -4.3946 11.5067 23 6 11.8996 -5.1705 12.5245 24 6 11.0327 -5.7895 13.4148 25 6 9.6709 -5.6044 13.2469 26 17 8.5408 -6.3538 14.3308 27 6 6.1756 -3.0883 11.2722 28 6 5.7496 -2.2023 10.0999 29 6 3.0953 -0.6585 3.3224 30 6 2.6387 -0.0109 2.1907 31 1 -0.3933 0.4418 0.7651 32 1 1.7924 -0.5139 -0.8899 33 1 3.5346 1.7702 0.0321 34 1 1.5615 2.4678 -1.2085 35 1 1.1315 -2.6047 0.6457 36 1 1.9491 -3.7683 2.6547 37 1 4.9138 -1.4480 5.0755 38 1 3.3925 -1.0660 5.9171 39 1 5.3809 -1.2759 7.7240 40 1 6.7312 -4.3843 7.6195 41 1 7.6415 -3.0236 8.3180 42 1 8.2321 -5.1565 9.4360 43 1 6.5240 -5.4010 9.8720 44 1 12.0526 -3.9110 10.8116 45 1 12.9675 -5.2948 12.6268 46 1 11.4119 -6.4020 14.2194 47 1 6.3141 -2.4733 12.1614 48 1 5.4039 -3.8341 11.4633 49 1 6.5213 -1.4566 9.9089 50 1 4.8132 -1.7010 10.3449 51 1 3.6440 -0.1108 4.0743 52 1 2.8310 1.0434 2.0580 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12496662_2989410.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:11:57 Heat of formation + Delta-G solvation = -79.425095 kcal Electronic energy + Delta-G solvation = -36028.065771 eV Core-core repulsion = 30985.859323 eV Total energy + Delta-G solvation = -5042.206449 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 419.138 amu Computer time = 1.69 seconds Orbital eigenvalues (eV) -41.91443 -41.57505 -40.86127 -39.83779 -39.01955 -37.98345 -37.61435 -37.09647 -35.03922 -33.42029 -32.43972 -31.97246 -31.78868 -31.58248 -30.46294 -28.65222 -26.21536 -25.15418 -24.49675 -24.09547 -23.83775 -23.02270 -22.29456 -21.63606 -21.05511 -19.62207 -19.48951 -18.56037 -18.23896 -18.02954 -17.44418 -17.36913 -17.31445 -16.90023 -16.80096 -16.46426 -16.04208 -15.92811 -15.91429 -15.59587 -15.46810 -15.19551 -14.98949 -14.75447 -14.61485 -14.43045 -14.33192 -14.25311 -13.98562 -13.75261 -13.58506 -13.44955 -13.39425 -13.34519 -13.13005 -12.98394 -12.76554 -12.28582 -12.24211 -12.22231 -12.09480 -12.07526 -12.03114 -11.74842 -11.55831 -11.32333 -10.99700 -10.78991 -10.73348 -10.39436 -10.19798 -10.04338 -9.48237 -9.23248 -4.98458 -0.11648 0.11568 0.27542 0.30670 1.03550 1.34758 1.43876 1.46217 1.66221 1.83659 2.00126 2.58380 2.58847 2.65601 3.21214 3.48092 3.54626 3.56623 3.58207 3.69512 3.75057 3.83464 3.88975 3.92190 3.95752 3.99356 4.03969 4.04928 4.11236 4.14703 4.23947 4.28435 4.31078 4.36426 4.38926 4.42706 4.49732 4.57005 4.67269 4.74164 4.79799 4.88112 4.96471 4.97182 5.00937 5.02382 5.04739 5.15594 5.17236 5.19710 5.25343 5.37023 5.40864 5.49937 5.69697 6.11658 6.26855 6.48009 6.65619 6.80441 7.13901 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.075 4.075 3 Si 0.783 3.217 4 C -0.162 4.162 5 C -0.062 4.062 6 C -0.168 4.168 7 C 0.121 3.879 8 O -0.321 6.321 9 C 0.036 3.964 10 C 0.512 3.488 11 O -0.573 6.573 12 N -0.703 5.703 13 C 0.146 3.854 14 H 0.066 0.934 15 C -0.115 4.115 16 C -0.125 4.125 17 C 0.092 3.908 18 H 0.096 0.904 19 O -0.305 6.305 20 C 0.316 3.684 21 N -0.540 5.540 22 C 0.137 3.863 23 C -0.191 4.191 24 C -0.035 4.035 25 C -0.134 4.134 26 Cl -0.056 7.056 27 C -0.112 4.112 28 C -0.109 4.109 29 C -0.199 4.199 30 C -0.074 4.074 31 H 0.395 0.605 32 H 0.101 0.899 33 H -0.282 1.282 34 H -0.304 1.304 35 H 0.131 0.869 36 H 0.124 0.876 37 H 0.126 0.874 38 H 0.131 0.869 39 H 0.423 0.577 40 H 0.050 0.950 41 H 0.086 0.914 42 H 0.059 0.941 43 H 0.057 0.943 44 H 0.196 0.804 45 H 0.179 0.821 46 H 0.170 0.830 47 H 0.086 0.914 48 H 0.068 0.932 49 H 0.096 0.904 50 H 0.096 0.904 51 H 0.168 0.832 52 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.827 9.429 3.724 11.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.184 4.184 3 Si 0.689 3.311 4 C -0.163 4.163 5 C -0.080 4.080 6 C -0.187 4.187 7 C 0.076 3.924 8 O -0.234 6.234 9 C -0.041 4.041 10 C 0.298 3.702 11 O -0.452 6.452 12 N -0.357 5.357 13 C 0.041 3.959 14 H 0.084 0.916 15 C -0.154 4.154 16 C -0.164 4.164 17 C 0.036 3.964 18 H 0.113 0.887 19 O -0.212 6.212 20 C 0.137 3.863 21 N -0.265 5.265 22 C -0.018 4.018 23 C -0.210 4.210 24 C -0.061 4.061 25 C -0.164 4.164 26 Cl -0.027 7.027 27 C -0.150 4.150 28 C -0.146 4.146 29 C -0.217 4.217 30 C -0.091 4.091 31 H 0.245 0.755 32 H 0.119 0.881 33 H -0.209 1.209 34 H -0.232 1.232 35 H 0.149 0.851 36 H 0.142 0.858 37 H 0.144 0.856 38 H 0.148 0.852 39 H 0.262 0.738 40 H 0.069 0.931 41 H 0.104 0.896 42 H 0.078 0.922 43 H 0.075 0.925 44 H 0.213 0.787 45 H 0.197 0.803 46 H 0.188 0.812 47 H 0.105 0.895 48 H 0.086 0.914 49 H 0.115 0.885 50 H 0.114 0.886 51 H 0.185 0.815 52 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 5.467 9.015 2.391 10.811 hybrid contribution 0.307 -1.433 0.283 1.493 sum 5.774 7.581 2.674 9.898 Atomic orbital electron populations 1.86469 1.17518 1.82240 1.50481 1.25206 0.85137 1.11130 0.96927 0.93799 0.77732 0.74779 0.84809 1.20364 1.02776 0.94840 0.98282 1.20902 0.96829 0.94194 0.96073 1.20610 1.02503 1.00981 0.94569 1.19215 0.94706 0.92015 0.86501 1.86132 1.69254 1.38484 1.29579 1.22772 0.99531 0.93625 0.88196 1.20601 0.77626 0.87979 0.83951 1.90774 1.56159 1.18940 1.79298 1.45679 1.55661 1.14413 1.19965 1.20983 0.95825 0.93166 0.85892 0.91580 1.21750 0.97572 0.99123 0.96956 1.21809 1.01451 0.98529 0.94584 1.22548 0.97970 0.92050 0.83823 0.88654 1.86351 1.17509 1.66844 1.50538 1.19698 0.85372 0.91253 0.89988 1.67484 1.05797 1.25321 1.27860 1.23208 0.89336 0.93233 0.96024 1.22424 1.03059 0.99633 0.95933 1.21813 0.89125 0.96122 0.99024 1.21180 0.92837 1.05194 0.97152 1.98384 1.61243 1.80627 1.62494 1.21563 0.94827 0.99149 0.99467 1.21690 1.04180 0.97515 0.91253 1.21525 1.06168 0.92631 1.01377 1.21071 0.95444 1.00163 0.92400 0.75518 0.88129 1.20854 1.23217 0.85116 0.85788 0.85624 0.85193 0.73830 0.93135 0.89552 0.92228 0.92452 0.78716 0.80318 0.81238 0.89528 0.91361 0.88500 0.88592 0.81505 0.82649 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.37 12.83 -148.98 -1.91 -2.29 16 2 C -0.07 0.04 2.80 71.24 0.20 0.24 16 3 Si 0.78 -2.76 29.80 68.60 2.04 -0.72 16 4 C -0.16 -0.01 5.35 -19.85 -0.11 -0.12 16 5 C -0.06 -0.19 9.68 22.25 0.22 0.02 16 6 C -0.17 -0.86 9.99 22.37 0.22 -0.63 16 7 C 0.12 0.37 6.69 22.51 0.15 0.52 16 8 O -0.32 -1.78 9.67 -73.35 -0.71 -2.49 16 9 C 0.04 -0.16 5.22 71.24 0.37 0.21 16 10 C 0.51 0.98 7.87 87.66 0.69 1.67 16 11 O -0.57 -8.26 16.16 16.01 0.26 -8.00 16 12 N -0.70 3.91 5.08 -442.55 -2.25 1.66 16 13 C 0.15 -0.31 2.45 44.99 0.11 -0.20 16 14 H 0.07 0.28 7.58 -2.39 -0.02 0.26 16 15 C -0.12 -0.01 5.49 30.59 0.17 0.16 16 16 C -0.13 -0.35 5.54 30.59 0.17 -0.18 16 17 C 0.09 0.11 2.38 30.60 0.07 0.19 16 18 H 0.10 0.05 6.99 -2.38 -0.02 0.04 16 19 O -0.31 -1.93 9.24 -90.09 -0.83 -2.76 16 20 C 0.32 1.78 7.45 84.83 0.63 2.41 16 21 N -0.54 -1.53 8.65 -308.87 -2.67 -4.20 16 22 C 0.14 -0.42 11.17 84.62 0.95 0.53 16 23 C -0.19 0.98 10.10 22.36 0.23 1.21 16 24 C -0.04 0.06 9.97 22.46 0.22 0.28 16 25 C -0.13 -0.56 6.36 22.51 0.14 -0.42 16 26 Cl -0.06 -0.32 28.54 -2.72 -0.08 -0.40 16 27 C -0.11 0.30 5.57 30.59 0.17 0.47 16 28 C -0.11 0.80 5.39 30.60 0.16 0.96 16 29 C -0.20 0.69 9.04 22.37 0.20 0.90 16 30 C -0.07 0.27 8.66 22.26 0.19 0.46 16 31 H 0.39 -3.02 8.70 -74.05 -0.64 -3.66 16 32 H 0.10 0.13 7.96 -2.39 -0.02 0.11 16 33 H -0.28 -0.14 7.11 99.48 0.71 0.57 16 34 H -0.30 -1.42 7.11 99.48 0.71 -0.72 16 35 H 0.13 0.33 8.06 -2.91 -0.02 0.31 16 36 H 0.12 0.74 8.06 -2.91 -0.02 0.72 16 37 H 0.13 -1.35 7.67 -2.39 -0.02 -1.37 16 38 H 0.13 -1.49 7.65 -2.38 -0.02 -1.51 16 39 H 0.42 -5.93 8.60 -92.71 -0.80 -6.73 16 40 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 41 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.06 0.31 8.14 -2.39 -0.02 0.29 16 43 H 0.06 0.33 8.14 -2.39 -0.02 0.31 16 44 H 0.20 -1.90 8.06 -2.91 -0.02 -1.93 16 45 H 0.18 -2.10 8.06 -2.91 -0.02 -2.12 16 46 H 0.17 -1.03 8.06 -2.91 -0.02 -1.06 16 47 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 48 H 0.07 -0.02 8.14 -2.38 -0.02 -0.04 16 49 H 0.10 -1.07 8.14 -2.39 -0.02 -1.09 16 50 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 51 H 0.17 -1.88 6.30 -2.91 -0.02 -1.90 16 52 H 0.16 -1.46 4.90 -2.91 -0.01 -1.47 16 Total: 0.00 -31.41 443.15 -1.40 -32.81 By element: Atomic # 1 Polarization: -21.87 SS G_CDS: -0.42 Total: -22.30 kcal Atomic # 6 Polarization: 3.51 SS G_CDS: 5.17 Total: 8.68 kcal Atomic # 7 Polarization: 2.38 SS G_CDS: -4.92 Total: -2.54 kcal Atomic # 8 Polarization: -12.34 SS G_CDS: -3.19 Total: -15.53 kcal Atomic # 14 Polarization: -2.76 SS G_CDS: 2.04 Total: -0.72 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -0.08 Total: -0.40 kcal Total: -31.41 -1.40 -32.81 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12496662_2989410.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.616 kcal (2) G-P(sol) polarization free energy of solvation -31.406 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.809 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds