Wall clock time and date at job start Sat Mar 6 2021 17:13:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.47201 * 2 1 4 4 C 1.50696 * 109.47276 * 119.99952 * 2 1 3 5 5 C 1.38244 * 119.94124 * 65.00381 * 4 2 1 6 6 C 1.38241 * 120.04798 * 180.02562 * 5 4 2 7 7 Br 1.89100 * 120.03564 * 179.97438 * 6 5 4 8 8 C 1.38788 * 119.92595 * 0.22701 * 6 5 4 9 9 O 1.35914 * 120.06155 * 179.72777 * 8 6 5 10 10 C 1.42896 * 117.00301 * 180.02562 * 9 8 6 11 11 C 1.50701 * 109.47108 * 180.02562 * 10 9 8 12 12 O 1.21285 * 120.00105 * 359.97438 * 11 10 9 13 13 N 1.34779 * 120.00176 * 179.97438 * 11 10 9 14 14 C 1.46500 * 120.00236 * 179.97438 * 13 11 10 15 15 H 1.09004 * 109.46679 * 34.99632 * 14 13 11 16 16 C 1.52999 * 109.47154 * 154.99805 * 14 13 11 17 17 C 1.52994 * 109.46984 * 179.97438 * 16 14 13 18 18 C 1.53003 * 109.47539 * 300.00084 * 17 16 14 19 19 H 1.09002 * 109.46856 * 300.00228 * 18 17 16 20 20 O 1.42897 * 109.47390 * 180.02562 * 18 17 16 21 21 C 1.35692 * 117.00371 * 150.00011 * 20 18 17 22 22 N 1.32232 * 119.68856 * 359.72851 * 21 20 18 23 23 C 1.31972 * 121.65969 * 179.71243 * 22 21 20 24 24 C 1.38042 * 120.85819 * 0.56464 * 23 22 21 25 25 C 1.38826 * 119.29927 * 359.71761 * 24 23 22 26 26 C 1.38466 * 118.47554 * 0.02562 * 25 24 23 27 27 Cl 1.73597 * 120.45519 * 180.02562 * 26 25 24 28 28 C 1.52999 * 109.47051 * 59.99957 * 18 17 16 29 29 C 1.53001 * 109.47160 * 275.00179 * 14 13 11 30 30 C 1.38724 * 119.87945 * 359.47318 * 8 6 5 31 31 C 1.38137 * 119.95736 * 0.54868 * 30 8 6 32 32 H 0.96703 * 113.99460 * 299.99766 * 1 2 3 33 33 H 1.08998 * 109.46990 * 240.00468 * 2 1 3 34 34 H 1.48494 * 110.00153 * 178.68284 * 3 2 1 35 35 H 1.48501 * 109.99889 * 300.00325 * 3 2 1 36 36 H 1.07998 * 119.97708 * 359.97438 * 5 4 2 37 37 H 1.09004 * 109.47002 * 299.99147 * 10 9 8 38 38 H 1.09001 * 109.47498 * 59.99792 * 10 9 8 39 39 H 0.96996 * 119.99637 * 359.97438 * 13 11 10 40 40 H 1.08999 * 109.46819 * 300.00546 * 16 14 13 41 41 H 1.09002 * 109.47070 * 59.99969 * 16 14 13 42 42 H 1.09002 * 109.47233 * 60.00081 * 17 16 14 43 43 H 1.09005 * 109.47104 * 180.02562 * 17 16 14 44 44 H 1.07997 * 119.57341 * 180.28749 * 23 22 21 45 45 H 1.08004 * 120.34544 * 179.75125 * 24 23 22 46 46 H 1.07998 * 120.76127 * 180.02562 * 25 24 23 47 47 H 1.08996 * 109.47362 * 59.99758 * 28 18 17 48 48 H 1.08994 * 109.47090 * 180.02562 * 28 18 17 49 49 H 1.09002 * 109.46798 * 299.99869 * 29 14 13 50 50 H 1.08992 * 109.47300 * 59.99511 * 29 14 13 51 51 H 1.08001 * 120.01956 * 180.24921 * 30 8 6 52 52 H 1.07997 * 119.96961 * 179.69745 * 31 30 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6842 -2.0603 1.3971 6 6 2.1435 -2.7140 2.5252 7 35 1.8045 -4.5604 2.7532 8 6 2.8492 -2.0126 3.4928 9 8 3.2973 -2.6514 4.6056 10 6 4.0158 -1.8664 5.5593 11 6 4.4306 -2.7378 6.7167 12 8 4.1392 -3.9151 6.7244 13 7 5.1254 -2.2089 7.7434 14 6 5.5282 -3.0559 8.8688 15 1 5.7655 -4.0555 8.5045 16 6 6.7614 -2.4534 9.5449 17 6 7.1816 -3.3376 10.7206 18 6 6.0358 -3.4212 11.7310 19 1 5.7986 -2.4215 12.0949 20 8 6.4285 -4.2466 12.8294 21 6 5.8821 -3.9639 14.0388 22 7 5.0324 -2.9573 14.1544 23 6 4.4738 -2.6516 15.3103 24 6 4.7683 -3.3708 16.4512 25 6 5.6599 -4.4320 16.3741 26 6 6.2253 -4.7313 15.1461 27 17 7.3461 -6.0479 14.9908 28 6 4.8026 -4.0238 11.0550 29 6 4.3825 -3.1402 9.8794 30 6 3.1010 -0.6594 3.3195 31 6 2.6393 -0.0109 2.1906 32 1 -0.3932 0.4417 0.7651 33 1 1.7923 -0.5138 -0.8900 34 1 3.5346 1.7703 0.0321 35 1 1.5615 2.4679 -1.2085 36 1 1.1310 -2.6043 0.6458 37 1 4.9027 -1.4435 5.0874 38 1 3.3774 -1.0605 5.9213 39 1 5.3588 -1.2675 7.7371 40 1 7.5775 -2.3934 8.8248 41 1 6.5241 -1.4538 9.9091 42 1 7.4188 -4.3373 10.3567 43 1 8.0599 -2.9080 11.2025 44 1 3.7807 -1.8252 15.3653 45 1 4.3094 -3.1108 17.3937 46 1 5.9069 -5.0108 17.2517 47 1 5.0398 -5.0234 10.6911 48 1 3.9862 -4.0829 11.7747 49 1 4.1452 -2.1406 10.2436 50 1 3.5040 -3.5694 9.3978 51 1 3.6534 -0.1123 4.0691 52 1 2.8310 1.0436 2.0578 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12496662_6201210.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:13:37 Heat of formation + Delta-G solvation = -72.679109 kcal Electronic energy + Delta-G solvation = -38406.828822 eV Core-core repulsion = 33025.096899 eV Total energy + Delta-G solvation = -5381.731924 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 497.048 amu Computer time = 1.91 seconds Orbital eigenvalues (eV) -41.91316 -41.66985 -40.91781 -39.85515 -39.10849 -37.97817 -37.61148 -37.18813 -35.02027 -33.60806 -33.41355 -32.01681 -31.94231 -31.62855 -30.72069 -30.21262 -28.68435 -26.33400 -25.15475 -24.49172 -24.09329 -23.82099 -22.96610 -22.34807 -21.62253 -21.05204 -19.61675 -19.57118 -18.60602 -18.25253 -18.04501 -17.50160 -17.36678 -17.30592 -17.07265 -16.83024 -16.45267 -16.13189 -15.94636 -15.85706 -15.63966 -15.62254 -15.19959 -15.05602 -14.77354 -14.70705 -14.43971 -14.42469 -14.25245 -13.98635 -13.88618 -13.78566 -13.66033 -13.38793 -13.34362 -13.12948 -12.98071 -12.76072 -12.34653 -12.28107 -12.21797 -12.17999 -12.12573 -12.07109 -11.91204 -11.83649 -11.55166 -11.31345 -11.23846 -10.97548 -10.78669 -10.72377 -10.42186 -10.17374 -9.97613 -9.47599 -9.32148 -4.97720 -0.10973 -0.05318 0.11969 0.12118 0.63957 1.03985 1.34075 1.40732 1.47659 1.67503 1.83807 2.02718 2.39885 2.51370 2.59040 3.21864 3.46420 3.49592 3.54561 3.57219 3.66417 3.70462 3.76548 3.83211 3.89811 3.93065 4.00731 4.04362 4.04754 4.11442 4.12369 4.15283 4.24789 4.29475 4.33116 4.37456 4.39961 4.50898 4.57968 4.64568 4.75087 4.80458 4.84999 4.88919 4.97563 5.00426 5.01724 5.03119 5.05423 5.18118 5.20713 5.23839 5.37983 5.41836 5.49314 6.07434 6.12356 6.48403 6.66201 6.79763 7.17210 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.077 4.077 3 Si 0.789 3.211 4 C -0.153 4.153 5 C -0.037 4.037 6 C -0.145 4.145 7 Br -0.057 7.057 8 C 0.149 3.851 9 O -0.307 6.307 10 C 0.032 3.968 11 C 0.511 3.489 12 O -0.569 6.569 13 N -0.703 5.703 14 C 0.147 3.853 15 H 0.064 0.936 16 C -0.108 4.108 17 C -0.112 4.112 18 C 0.092 3.908 19 H 0.096 0.904 20 O -0.306 6.306 21 C 0.316 3.684 22 N -0.540 5.540 23 C 0.138 3.862 24 C -0.191 4.191 25 C -0.035 4.035 26 C -0.134 4.134 27 Cl -0.057 7.057 28 C -0.125 4.125 29 C -0.115 4.115 30 C -0.188 4.188 31 C -0.052 4.052 32 H 0.396 0.604 33 H 0.103 0.897 34 H -0.276 1.276 35 H -0.305 1.305 36 H 0.134 0.866 37 H 0.132 0.868 38 H 0.135 0.865 39 H 0.423 0.577 40 H 0.094 0.906 41 H 0.098 0.902 42 H 0.066 0.934 43 H 0.086 0.914 44 H 0.197 0.803 45 H 0.180 0.820 46 H 0.170 0.830 47 H 0.055 0.945 48 H 0.059 0.941 49 H 0.087 0.913 50 H 0.050 0.950 51 H 0.183 0.817 52 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.421 13.192 6.406 14.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.186 4.186 3 Si 0.694 3.306 4 C -0.155 4.155 5 C -0.057 4.057 6 C -0.225 4.225 7 Br 0.028 6.972 8 C 0.101 3.899 9 O -0.219 6.219 10 C -0.045 4.045 11 C 0.297 3.703 12 O -0.447 6.447 13 N -0.358 5.358 14 C 0.042 3.958 15 H 0.082 0.918 16 C -0.146 4.146 17 C -0.150 4.150 18 C 0.036 3.964 19 H 0.114 0.886 20 O -0.213 6.213 21 C 0.137 3.863 22 N -0.264 5.264 23 C -0.018 4.018 24 C -0.211 4.211 25 C -0.061 4.061 26 C -0.164 4.164 27 Cl -0.028 7.028 28 C -0.164 4.164 29 C -0.153 4.153 30 C -0.207 4.207 31 C -0.070 4.070 32 H 0.246 0.754 33 H 0.121 0.879 34 H -0.203 1.203 35 H -0.233 1.233 36 H 0.152 0.848 37 H 0.150 0.850 38 H 0.153 0.847 39 H 0.262 0.738 40 H 0.113 0.887 41 H 0.116 0.884 42 H 0.085 0.915 43 H 0.104 0.896 44 H 0.214 0.786 45 H 0.197 0.803 46 H 0.187 0.813 47 H 0.074 0.926 48 H 0.078 0.922 49 H 0.106 0.894 50 H 0.069 0.931 51 H 0.200 0.800 52 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 1.738 11.875 4.731 12.900 hybrid contribution 0.271 -1.198 0.213 1.247 sum 2.009 10.677 4.944 11.936 Atomic orbital electron populations 1.86492 1.17392 1.82249 1.50504 1.25292 0.85268 1.11439 0.96558 0.93811 0.77813 0.73958 0.85021 1.20374 1.02678 0.93668 0.98754 1.20874 0.95840 0.94548 0.94412 1.21280 1.09983 0.91808 0.99474 1.96761 1.94962 1.07730 1.97715 1.18815 0.93269 0.91833 0.86007 1.86251 1.68980 1.38021 1.28643 1.22882 0.99844 0.93677 0.88103 1.20566 0.77869 0.87991 0.83848 1.90801 1.55278 1.18863 1.79769 1.45660 1.56255 1.14480 1.19362 1.20962 0.94402 0.94971 0.85461 0.91753 1.21685 0.96521 0.99915 0.96500 1.21564 0.97152 1.01589 0.94735 1.22550 0.95020 0.94858 0.83953 0.88559 1.86353 1.63987 1.56355 1.14610 1.19697 0.90527 0.90095 0.85989 1.67487 1.11942 1.16662 1.30316 1.23215 0.94652 0.97908 0.85976 1.22428 1.00135 0.96436 1.02057 1.21813 0.92671 0.96116 0.95499 1.21180 1.03225 0.97115 0.94887 1.98384 1.60243 1.45989 1.98201 1.21801 0.97464 0.99574 0.97558 1.21735 0.97981 1.00929 0.94679 1.21590 1.05822 0.91511 1.01772 1.21261 0.93491 1.00652 0.91581 0.75408 0.87939 1.20260 1.23300 0.84829 0.85043 0.84747 0.73821 0.88714 0.88400 0.91487 0.89583 0.78649 0.80305 0.81271 0.92585 0.92208 0.89431 0.93094 0.80033 0.81461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.45 12.83 -148.98 -1.91 -1.46 16 2 C -0.08 0.19 2.80 71.23 0.20 0.39 16 3 Si 0.79 -4.62 29.80 68.60 2.04 -2.58 16 4 C -0.15 0.29 5.35 -19.85 -0.11 0.18 16 5 C -0.04 -0.11 9.42 22.27 0.21 0.10 16 6 C -0.15 -0.85 6.24 22.40 0.14 -0.71 16 7 Br -0.06 -0.58 33.16 -20.37 -0.68 -1.26 16 8 C 0.15 0.29 6.68 22.52 0.15 0.44 16 9 O -0.31 -1.34 9.00 -73.55 -0.66 -2.00 16 10 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 11 C 0.51 0.51 7.87 87.66 0.69 1.20 16 12 O -0.57 -7.89 16.16 15.99 0.26 -7.63 16 13 N -0.70 4.46 5.08 -442.52 -2.25 2.21 16 14 C 0.15 -0.37 2.46 44.99 0.11 -0.26 16 15 H 0.06 0.27 7.58 -2.38 -0.02 0.25 16 16 C -0.11 0.82 5.39 30.59 0.16 0.98 16 17 C -0.11 0.30 5.57 30.59 0.17 0.47 16 18 C 0.09 0.10 2.38 30.60 0.07 0.18 16 19 H 0.10 0.03 6.98 -2.39 -0.02 0.01 16 20 O -0.31 -1.93 9.24 -90.11 -0.83 -2.77 16 21 C 0.32 1.76 7.45 84.82 0.63 2.39 16 22 N -0.54 -1.41 8.64 -308.87 -2.67 -4.08 16 23 C 0.14 -0.45 11.17 84.63 0.95 0.49 16 24 C -0.19 1.01 10.10 22.36 0.23 1.23 16 25 C -0.04 0.06 9.97 22.46 0.22 0.28 16 26 C -0.13 -0.56 6.36 22.51 0.14 -0.42 16 27 Cl -0.06 -0.33 28.54 -2.72 -0.08 -0.41 16 28 C -0.13 -0.33 5.54 30.58 0.17 -0.16 16 29 C -0.11 0.04 5.49 30.58 0.17 0.21 16 30 C -0.19 1.19 9.04 22.36 0.20 1.39 16 31 C -0.05 0.35 8.66 22.26 0.19 0.54 16 32 H 0.40 -3.68 8.70 -74.06 -0.64 -4.32 16 33 H 0.10 -0.04 7.96 -2.39 -0.02 -0.06 16 34 H -0.28 0.66 7.11 99.48 0.71 1.37 16 35 H -0.30 -0.89 7.11 99.48 0.71 -0.18 16 36 H 0.13 0.52 8.06 -2.91 -0.02 0.50 16 37 H 0.13 -1.73 7.65 -2.38 -0.02 -1.74 16 38 H 0.14 -1.82 7.67 -2.39 -0.02 -1.84 16 39 H 0.42 -6.35 8.60 -92.71 -0.80 -7.15 16 40 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 41 H 0.10 -1.13 8.14 -2.39 -0.02 -1.14 16 42 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 43 H 0.09 -0.31 8.14 -2.38 -0.02 -0.32 16 44 H 0.20 -1.98 8.06 -2.91 -0.02 -2.00 16 45 H 0.18 -2.13 8.06 -2.91 -0.02 -2.15 16 46 H 0.17 -1.03 8.06 -2.91 -0.02 -1.05 16 47 H 0.06 0.33 8.14 -2.39 -0.02 0.31 16 48 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 49 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 50 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 51 H 0.18 -2.75 6.30 -2.91 -0.02 -2.76 16 52 H 0.17 -2.22 4.90 -2.91 -0.01 -2.24 16 Total: 0.00 -34.08 463.55 -2.10 -36.18 By element: Atomic # 1 Polarization: -24.91 SS G_CDS: -0.40 Total: -25.31 kcal Atomic # 6 Polarization: 4.02 SS G_CDS: 5.08 Total: 9.10 kcal Atomic # 7 Polarization: 3.04 SS G_CDS: -4.92 Total: -1.87 kcal Atomic # 8 Polarization: -10.71 SS G_CDS: -3.15 Total: -13.86 kcal Atomic # 14 Polarization: -4.62 SS G_CDS: 2.04 Total: -2.58 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -0.08 Total: -0.41 kcal Atomic # 35 Polarization: -0.58 SS G_CDS: -0.68 Total: -1.26 kcal Total: -34.08 -2.10 -36.18 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12496662_6201210.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.500 kcal (2) G-P(sol) polarization free energy of solvation -34.082 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.582 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.179 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.91 seconds