Wall clock time and date at job start Sat Mar 6 2021 19:41:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81403 * 1 3 3 C 1.81398 * 103.00085 * 2 1 4 4 H 1.09009 * 112.84923 * 316.19715 * 3 2 1 5 5 C 1.54049 * 113.69477 * 87.46713 * 3 2 1 6 6 C 1.53784 * 86.98600 * 139.99264 * 5 3 2 7 7 H 1.08996 * 113.61359 * 219.98258 * 6 5 3 8 8 N 1.46499 * 113.61779 * 89.15904 * 6 5 3 9 9 C 1.34778 * 119.99708 * 105.86388 * 8 6 5 10 10 O 1.21572 * 120.00160 * 0.02562 * 9 8 6 11 11 C 1.47699 * 119.99752 * 180.02562 * 9 8 6 12 12 C 1.39800 * 120.15047 * 180.02562 * 11 9 8 13 13 F 1.35099 * 120.09118 * 359.94559 * 12 11 9 14 14 C 1.38319 * 119.83108 * 179.97438 * 12 11 9 15 15 C 1.38187 * 120.14357 * 359.97438 * 14 12 11 16 16 C 1.50699 * 119.84298 * 180.02562 * 15 14 12 17 17 O 1.42901 * 109.46830 * 255.00252 * 16 15 14 18 18 Si 1.86298 * 109.46950 * 135.00690 * 16 15 14 19 19 C 1.38658 * 120.31250 * 0.28399 * 15 14 12 20 20 F 1.35102 * 119.91688 * 179.72258 * 19 15 14 21 21 C 1.38070 * 120.16977 * 359.44223 * 19 15 14 22 22 C 1.53781 * 113.61652 * 185.00264 * 3 2 1 23 23 H 1.09002 * 109.47434 * 59.99800 * 1 2 3 24 24 H 1.08995 * 109.47208 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47122 * 299.99985 * 1 2 3 26 26 H 1.08996 * 113.61628 * 25.48643 * 5 3 2 27 27 H 1.09009 * 113.69661 * 254.50433 * 5 3 2 28 28 H 0.97002 * 120.00073 * 285.86899 * 8 6 5 29 29 H 1.07995 * 119.92984 * 179.97438 * 14 12 11 30 30 H 1.08991 * 109.47351 * 15.00400 * 16 15 14 31 31 H 0.96708 * 114.00246 * 299.99864 * 17 16 15 32 32 H 1.48506 * 109.99834 * 180.02562 * 18 16 15 33 33 H 1.48502 * 110.00011 * 301.31529 * 18 16 15 34 34 H 1.07997 * 120.07695 * 180.25969 * 21 19 15 35 35 H 1.08996 * 113.61309 * 105.38113 * 22 3 2 36 36 H 1.08999 * 113.68801 * 334.49516 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 1 1.6109 2.3430 -0.6953 5 6 2.3006 2.3847 1.4093 6 6 3.5202 3.1752 0.9067 7 1 4.3238 3.2505 1.6392 8 7 3.1758 4.4660 0.3053 9 6 3.4207 5.6088 0.9765 10 8 3.9277 5.5686 2.0807 11 6 3.0730 6.9101 0.3704 12 6 3.3260 8.0975 1.0636 13 9 3.8887 8.0585 2.2911 14 6 2.9982 9.3125 0.4895 15 6 2.4225 9.3540 -0.7660 16 6 2.0686 10.6815 -1.3852 17 8 0.6539 10.8736 -1.3239 18 14 2.6218 10.7041 -3.1641 19 6 2.1640 8.1797 -1.4565 20 9 1.5957 8.2293 -2.6812 21 6 2.4911 6.9600 -0.8982 22 6 3.7284 2.0520 -0.1229 23 1 -0.3634 0.5139 -0.8900 24 1 -0.3633 -1.0276 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 2.5399 1.6623 2.1896 27 1 1.4462 3.0133 1.6605 28 1 2.7716 4.4981 -0.5759 29 1 3.1926 10.2307 1.0237 30 1 2.5680 11.4818 -0.8393 31 1 0.1444 10.1965 -1.7899 32 1 2.2790 12.0084 -3.7860 33 1 4.0866 10.4735 -3.2434 34 1 2.2930 6.0465 -1.4391 35 1 4.0258 2.4119 -1.1078 36 1 4.3584 1.2394 0.2388 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12525166_12360598.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:41:58 Heat of formation + Delta-G solvation = -91.198945 kcal Electronic energy + Delta-G solvation = -23937.725507 eV Core-core repulsion = 19959.134167 eV Total energy + Delta-G solvation = -3978.591340 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.073 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -50.61827 -50.05442 -41.65239 -40.37498 -39.15292 -37.76328 -34.76971 -33.08965 -31.50547 -29.98540 -28.20042 -26.96509 -26.32835 -24.70561 -23.79313 -22.21043 -20.88859 -19.73185 -19.11521 -18.63260 -18.07418 -17.88995 -17.48397 -17.11640 -16.97672 -16.72183 -16.24753 -15.99549 -15.92233 -15.77466 -15.70260 -15.45389 -15.07479 -14.62236 -14.55425 -14.27363 -14.20889 -13.92392 -13.81461 -13.72275 -13.48601 -13.15132 -12.63906 -12.58917 -12.16039 -11.98788 -11.73049 -11.23873 -10.94683 -10.90945 -10.49203 -10.32615 -9.94080 -8.71276 -4.96405 -0.91616 -0.45622 0.64923 1.02321 1.32113 1.48778 1.54830 1.70005 1.84820 2.16872 2.57708 2.71419 2.95210 3.08567 3.16908 3.20308 3.27803 3.35881 3.55685 3.63035 3.73020 4.02186 4.05821 4.11782 4.14808 4.19209 4.31655 4.43215 4.52921 4.53702 4.58397 4.61681 4.64913 4.70098 4.74616 4.83507 5.23586 5.30960 6.14344 6.26449 6.90658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.249 6.249 3 C -0.087 4.087 4 H 0.104 0.896 5 C -0.138 4.138 6 C 0.124 3.876 7 H 0.115 0.885 8 N -0.708 5.708 9 C 0.564 3.436 10 O -0.509 6.509 11 C -0.147 4.147 12 C 0.162 3.838 13 F -0.104 7.104 14 C -0.117 4.117 15 C -0.090 4.090 16 C -0.074 4.074 17 O -0.529 6.529 18 Si 0.677 3.323 19 C 0.079 3.921 20 F -0.103 7.103 21 C -0.083 4.083 22 C -0.115 4.115 23 H 0.076 0.924 24 H 0.101 0.899 25 H 0.077 0.923 26 H 0.107 0.893 27 H 0.077 0.923 28 H 0.400 0.600 29 H 0.158 0.842 30 H 0.124 0.876 31 H 0.380 0.620 32 H -0.244 1.244 33 H -0.251 1.251 34 H 0.154 0.846 35 H 0.085 0.915 36 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.708 -1.466 -4.469 5.427 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.021 6.021 3 C -0.216 4.216 4 H 0.122 0.878 5 C -0.179 4.179 6 C 0.017 3.983 7 H 0.133 0.867 8 N -0.360 5.360 9 C 0.350 3.650 10 O -0.384 6.384 11 C -0.152 4.152 12 C 0.141 3.859 13 F -0.082 7.082 14 C -0.136 4.136 15 C -0.092 4.092 16 C -0.184 4.184 17 O -0.334 6.334 18 Si 0.576 3.424 19 C 0.060 3.940 20 F -0.082 7.082 21 C -0.103 4.103 22 C -0.154 4.154 23 H 0.095 0.905 24 H 0.120 0.880 25 H 0.096 0.904 26 H 0.125 0.875 27 H 0.095 0.905 28 H 0.236 0.764 29 H 0.175 0.825 30 H 0.141 0.859 31 H 0.228 0.772 32 H -0.168 1.168 33 H -0.175 1.175 34 H 0.171 0.829 35 H 0.104 0.896 36 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -0.987 -1.504 -3.926 4.318 hybrid contribution -1.095 1.059 0.153 1.531 sum -2.083 -0.445 -3.773 4.333 Atomic orbital electron populations 1.23383 0.94030 1.06717 1.04985 1.86984 1.07654 1.09819 1.97608 1.24858 1.00740 0.94750 1.01204 0.87813 1.23832 0.99064 0.99254 0.95729 1.21853 0.98632 0.81281 0.96547 0.86748 1.45531 1.64162 1.05071 1.21255 1.17804 0.78749 0.83220 0.85235 1.90907 1.41701 1.86935 1.18835 1.19835 1.06076 0.93433 0.95828 1.17663 0.94148 0.92686 0.81414 1.91661 1.81056 1.97052 1.38421 1.20979 1.00232 0.97719 0.94709 1.20460 0.98448 0.95633 0.94657 1.25136 0.86744 0.94290 1.12256 1.86589 1.14615 1.53509 1.78730 0.94488 0.82899 0.86771 0.78259 1.17204 1.00955 0.93601 0.82271 1.91208 1.82171 1.95283 1.39519 1.21078 0.97488 0.97618 0.94072 1.23169 0.93743 0.98037 1.00473 0.90474 0.87989 0.90363 0.87465 0.90452 0.76362 0.82482 0.85854 0.77225 1.16816 1.17518 0.82893 0.89594 0.87341 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.23 10.76 101.05 1.09 1.32 16 2 S -0.25 0.02 22.19 -107.50 -2.38 -2.37 16 3 C -0.09 0.20 4.16 -25.78 -0.11 0.10 16 4 H 0.10 -0.37 8.14 -51.92 -0.42 -0.79 16 5 C -0.14 0.24 7.49 -25.78 -0.19 0.05 16 6 C 0.12 -0.21 4.30 -67.12 -0.29 -0.50 16 7 H 0.11 0.00 7.50 -51.93 -0.39 -0.39 16 8 N -0.71 1.52 5.21 -54.00 -0.28 1.24 16 9 C 0.56 0.61 7.77 -12.40 -0.10 0.52 16 10 O -0.51 -2.72 14.96 5.30 0.08 -2.64 16 11 C -0.15 0.06 5.88 -104.92 -0.62 -0.56 16 12 C 0.16 0.15 7.28 -38.97 -0.28 -0.14 16 13 F -0.10 -0.38 15.55 2.25 0.04 -0.34 16 14 C -0.12 0.11 9.63 -39.57 -0.38 -0.27 16 15 C -0.09 0.15 4.78 -104.49 -0.50 -0.35 16 16 C -0.07 0.12 2.80 36.01 0.10 0.22 16 17 O -0.53 0.44 12.88 -35.23 -0.45 -0.02 16 18 Si 0.68 -0.95 29.58 -169.99 -5.03 -5.98 16 19 C 0.08 -0.21 6.59 -39.49 -0.26 -0.47 16 20 F -0.10 0.39 13.43 2.25 0.03 0.42 16 21 C -0.08 0.27 9.52 -39.11 -0.37 -0.11 16 22 C -0.11 0.32 7.41 -25.92 -0.19 0.13 16 23 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 24 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 25 H 0.08 -0.18 8.14 -51.92 -0.42 -0.60 16 26 H 0.11 -0.14 8.11 -51.93 -0.42 -0.56 16 27 H 0.08 -0.11 8.14 -51.92 -0.42 -0.53 16 28 H 0.40 -2.03 6.74 -40.82 -0.27 -2.31 16 29 H 0.16 -0.38 7.99 -52.49 -0.42 -0.80 16 30 H 0.12 -0.24 7.76 -51.93 -0.40 -0.65 16 31 H 0.38 -1.64 8.36 45.56 0.38 -1.26 16 32 H -0.24 -0.36 7.11 56.52 0.40 0.04 16 33 H -0.25 -0.26 7.11 56.52 0.40 0.15 16 34 H 0.15 -0.98 6.40 -52.49 -0.34 -1.32 16 35 H 0.09 -0.32 8.14 -51.93 -0.42 -0.75 16 36 H 0.11 -0.26 8.10 -51.93 -0.42 -0.68 16 LS Contribution 326.19 15.07 4.92 4.92 Total: 0.00 -7.35 326.19 -9.21 -16.56 By element: Atomic # 1 Polarization: -7.70 SS G_CDS: -4.02 Total: -11.71 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -2.10 Total: -0.07 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -0.28 Total: 1.24 kcal Atomic # 8 Polarization: -2.29 SS G_CDS: -0.37 Total: -2.66 kcal Atomic # 9 Polarization: 0.01 SS G_CDS: 0.07 Total: 0.08 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.03 Total: -5.98 kcal Atomic # 16 Polarization: 0.02 SS G_CDS: -2.38 Total: -2.37 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -7.35 -9.21 -16.56 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12525166_12360598.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.637 kcal (2) G-P(sol) polarization free energy of solvation -7.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.562 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.199 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds